RNA–Protein interactions for RNA: ENST00000621266.4

COL4A6-210, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,627 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-210ENST00000621266 FTLP02792 175 aaPredicted RBP10.38□□□□□ -0.75
COL4A6-210ENST00000621266 YY1P25490 414 aa10.38□□□□□ -0.75
COL4A6-210ENST00000621266 HOXA13P31271 388 aaPredicted RBP10.38□□□□□ -0.75
COL4A6-210ENST00000621266 SCTRP47872 440 aa10.38□□□□□ -0.75
COL4A6-210ENST00000621266 KRR1Q13601 381 aaKnown RBP10.38□□□□□ -0.75
COL4A6-210ENST00000621266 UBE2SQ16763 222 aa10.38□□□□□ -0.75
COL4A6-210ENST00000621266 BPIFA3Q9BQP9 254 aa10.38□□□□□ -0.75
COL4A6-210ENST00000621266 MXD3Q9BW11 206 aa10.38□□□□□ -0.75
COL4A6-210ENST00000621266 SPRTNQ9H040 489 aaPredicted RBP10.38□□□□□ -0.75
COL4A6-210ENST00000621266 CYLDQ9NQC7 956 aa10.38□□□□□ -0.75
COL4A6-210ENST00000621266 PCMTD2Q9NV79 361 aa10.38□□□□□ -0.75
COL4A6-210ENST00000621266 MTO1Q9Y2Z2 717 aaKnown RBP10.38□□□□□ -0.75
COL4A6-210ENST00000621266 ALKQ9UM73 1620 aa10.38□□□□□ -0.75
COL4A6-210ENST00000621266 SPATA31A1Q5TZJ5 1347 aa10.38□□□□□ -0.75
COL4A6-210ENST00000621266 IFNAR1P17181 557 aa10.38□□□□□ -0.75
COL4A6-210ENST00000621266 PSMC3P17980 439 aa10.38□□□□□ -0.75
COL4A6-210ENST00000621266 ITGB3BPQ13352 177 aaPredicted RBP10.38□□□□□ -0.75
COL4A6-210ENST00000621266 CTTNQ14247 550 aaKnown RBP10.38□□□□□ -0.75
COL4A6-210ENST00000621266 AGBL2Q5U5Z8 902 aa10.38□□□□□ -0.75
COL4A6-210ENST00000621266 ELMSAN1Q6PJG2 1045 aa10.38□□□□□ -0.75
COL4A6-210ENST00000621266 KCTD17Q8N5Z5 321 aa10.38□□□□□ -0.75
COL4A6-210ENST00000621266 MIEF2Q96C03 454 aa10.38□□□□□ -0.75
COL4A6-210ENST00000621266 REXO4Q9GZR2 422 aaKnown RBP10.38□□□□□ -0.75
COL4A6-210ENST00000621266 PAIP1Q9H074 479 aaKnown RBP10.38□□□□□ -0.75
COL4A6-210ENST00000621266 KLHL11Q9NVR0 708 aa10.38□□□□□ -0.75
COL4A6-210ENST00000621266 TRIM10Q9UDY6 481 aa10.38□□□□□ -0.75
COL4A6-210ENST00000621266 DCDC2Q9UHG0 476 aa10.38□□□□□ -0.75
COL4A6-210ENST00000621266 FAM47DPA6NHR8 397 aa10.38□□□□□ -0.75
COL4A6-210ENST00000621266 SNPHO15079 494 aa10.38□□□□□ -0.75
COL4A6-210ENST00000621266 ATP9BO43861 1147 aa10.38□□□□□ -0.75
COL4A6-210ENST00000621266 TPST1O60507 370 aa10.38□□□□□ -0.75
COL4A6-210ENST00000621266 NFIXQ14938 502 aa10.38□□□□□ -0.75
COL4A6-210ENST00000621266 FAM83BQ5T0W9 1011 aa10.38□□□□□ -0.75
COL4A6-210ENST00000621266 RNF139Q8WU17 664 aa10.38□□□□□ -0.75
COL4A6-210ENST00000621266 TRIM63Q969Q1 353 aa10.38□□□□□ -0.75
COL4A6-210ENST00000621266 NARS2Q96I59 477 aaKnown RBP10.38□□□□□ -0.75
COL4A6-210ENST00000621266 AIPL1Q9NZN9 384 aa10.38□□□□□ -0.75
COL4A6-210ENST00000621266 MYO1DO94832 1006 aa10.37□□□□□ -0.75
COL4A6-210ENST00000621266 KLHL2O95198 593 aa10.37□□□□□ -0.75
COL4A6-210ENST00000621266 GH2P01242 217 aa10.37□□□□□ -0.75
COL4A6-210ENST00000621266 ABCE1P61221 599 aaKnown RBP10.37□□□□□ -0.75
COL4A6-210ENST00000621266 GANCQ8TET4 914 aa10.37□□□□□ -0.75
COL4A6-210ENST00000621266 CAPSLQ8WWF8 208 aa10.37□□□□□ -0.75
COL4A6-210ENST00000621266 DPF3Q92784 378 aa10.37□□□□□ -0.75
COL4A6-210ENST00000621266 PDLIM2Q96JY6 352 aa10.37□□□□□ -0.75
COL4A6-210ENST00000621266 NACC1Q96RE7 527 aa10.37□□□□□ -0.75
COL4A6-210ENST00000621266 PIGSQ96S52 555 aa10.37□□□□□ -0.75
COL4A6-210ENST00000621266 WNT8AQ9H1J5 351 aa10.37□□□□□ -0.75
COL4A6-210ENST00000621266 H2AFY2Q9P0M6 372 aaPredicted RBP10.37□□□□□ -0.75
COL4A6-210ENST00000621266 LIMA1Q9UHB6 759 aaKnown RBP10.37□□□□□ -0.75
COL4A6-210ENST00000621266 CDYLQ9Y232 598 aa10.37□□□□□ -0.75
COL4A6-210ENST00000621266 FAM32AQ9Y421 112 aaKnown RBP10.37□□□□□ -0.75
COL4A6-210ENST00000621266 C1orf232A0A0U1RR37 186 aa10.37□□□□□ -0.75
COL4A6-210ENST00000621266 CLPTM1O96005 669 aa10.37□□□□□ -0.75
COL4A6-210ENST00000621266 IGKV5-2P06315 115 aa10.37□□□□□ -0.75
COL4A6-210ENST00000621266 CACNA2D1P54289 1103 aa10.37□□□□□ -0.75
COL4A6-210ENST00000621266 C9orf131Q5VYM1 1079 aa10.37□□□□□ -0.75
COL4A6-210ENST00000621266 KLF6Q99612 283 aaPredicted RBP10.37□□□□□ -0.75
COL4A6-210ENST00000621266 GJB4Q9NTQ9 266 aa10.37□□□□□ -0.75
COL4A6-210ENST00000621266 ASNSD1Q9NWL6 643 aa10.37□□□□□ -0.75
COL4A6-210ENST00000621266 LMCD1Q9NZU5 365 aa10.37□□□□□ -0.75
COL4A6-210ENST00000621266 KRT87PA6NCN2 255 aa10.37□□□□□ -0.75
COL4A6-210ENST00000621266 TRIM24O15164 1050 aa10.37□□□□□ -0.75
COL4A6-210ENST00000621266 ADRA2BP18089 450 aa10.37□□□□□ -0.75
COL4A6-210ENST00000621266 LIFRP42702 1097 aa10.37□□□□□ -0.75
COL4A6-210ENST00000621266 HSPA13P48723 471 aa10.37□□□□□ -0.75
COL4A6-210ENST00000621266 LAMC2Q13753 1193 aa10.37□□□□□ -0.75
COL4A6-210ENST00000621266 SPDYAQ5MJ70 313 aa10.37□□□□□ -0.75
COL4A6-210ENST00000621266 HEATR6Q6AI08 1181 aaKnown RBP10.37□□□□□ -0.75
COL4A6-210ENST00000621266 TMED8Q6PL24 325 aaPredicted RBP10.37□□□□□ -0.75
COL4A6-210ENST00000621266 MCRS1Q96EZ8 462 aa10.37□□□□□ -0.75
COL4A6-210ENST00000621266 PDZK1P1A8MUH7 402 aa10.37□□□□□ -0.75
COL4A6-210ENST00000621266 ZBTB39O15060 712 aa10.37□□□□□ -0.75
COL4A6-210ENST00000621266 ATP6V1G2O95670 118 aa10.37□□□□□ -0.75
COL4A6-210ENST00000621266 GUCA1CO95843 209 aa10.37□□□□□ -0.75
COL4A6-210ENST00000621266 IL12RB1P42701 662 aa10.37□□□□□ -0.75
COL4A6-210ENST00000621266 NUP107P57740 925 aa10.37□□□□□ -0.75
COL4A6-210ENST00000621266 KIAA1755Q5JYT7 1200 aa10.37□□□□□ -0.75
COL4A6-210ENST00000621266 FOXP4Q8IVH2 680 aaPredicted RBP10.37□□□□□ -0.75
COL4A6-210ENST00000621266 RUBCNQ92622 972 aa10.37□□□□□ -0.75
COL4A6-210ENST00000621266 WDR11Q9BZH6 1224 aa10.37□□□□□ -0.75
COL4A6-210ENST00000621266 KDM4CQ9H3R0 1056 aa10.37□□□□□ -0.75
COL4A6-210ENST00000621266 NDFIP2Q9NV92 336 aa10.37□□□□□ -0.75
COL4A6-210ENST00000621266 SNX12Q9UMY4 172 aa10.37□□□□□ -0.75
COL4A6-210ENST00000621266 PCDHGB4Q9UN71 923 aa10.37□□□□□ -0.75
COL4A6-210ENST00000621266 SPHKAPQ2M3C7 1700 aa10.37□□□□□ -0.75
COL4A6-210ENST00000621266 HNRNPRO43390 633 aaKnown RBP10.37□□□□□ -0.75
COL4A6-210ENST00000621266 S100A9P06702 114 aaKnown RBP10.37□□□□□ -0.75
COL4A6-210ENST00000621266 ADARP55265 1226 aaKnown RBP10.37□□□□□ -0.75
COL4A6-210ENST00000621266 COG2Q14746 738 aa10.37□□□□□ -0.75
COL4A6-210ENST00000621266 P3H1Q32P28 736 aa10.37□□□□□ -0.75
COL4A6-210ENST00000621266 MTERF2Q49AM1 385 aa10.37□□□□□ -0.75
COL4A6-210ENST00000621266 CEP95Q96GE4 821 aa10.37□□□□□ -0.75
COL4A6-210ENST00000621266 ZSWIM5Q9P217 1185 aa10.37□□□□□ -0.75
COL4A6-210ENST00000621266 NLRP11P59045 1033 aaKnown RBP10.36□□□□□ -0.75
COL4A6-210ENST00000621266 TFDP2Q14188 446 aa10.36□□□□□ -0.75
COL4A6-210ENST00000621266 NAALADL2Q58DX5 795 aa10.36□□□□□ -0.75
COL4A6-210ENST00000621266 LRRC34Q8IZ02 419 aa10.36□□□□□ -0.75
COL4A6-210ENST00000621266 DIS3LQ8TF46 1054 aaKnown RBP10.36□□□□□ -0.75
COL4A6-210ENST00000621266 CATSPER2Q96P56 530 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms