RNA–Protein interactions for RNA: ENST00000621093.4

POLR2J3-221, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene POLR2J3, Length 348 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-221ENST00000621093 CBWD6Q4V339 395 aa11.8□□□□□ -0.52
POLR2J3-221ENST00000621093 TCP11X2Q5H9J9 407 aa11.8□□□□□ -0.52
POLR2J3-221ENST00000621093 CBWD3Q5JTY5 395 aa11.8□□□□□ -0.52
POLR2J3-221ENST00000621093 CBWD5Q5RIA9 395 aa11.8□□□□□ -0.52
POLR2J3-221ENST00000621093 C15orf39Q6ZRI6 1047 aa11.8□□□□□ -0.52
POLR2J3-221ENST00000621093 SV2AQ7L0J3 742 aa11.8□□□□□ -0.52
POLR2J3-221ENST00000621093 TAS1R1Q7RTX1 841 aa11.8□□□□□ -0.52
POLR2J3-221ENST00000621093 GAS2L3Q86XJ1 694 aa11.8□□□□□ -0.52
POLR2J3-221ENST00000621093 FBXO22Q8NEZ5 403 aa11.8□□□□□ -0.52
POLR2J3-221ENST00000621093 IGSF21Q96ID5 467 aa11.8□□□□□ -0.52
POLR2J3-221ENST00000621093 UROC1Q96N76 676 aa11.8□□□□□ -0.52
POLR2J3-221ENST00000621093 COLEC11Q9BWP8 271 aa11.8□□□□□ -0.52
POLR2J3-221ENST00000621093 GPR62Q9BZJ7 368 aa11.8□□□□□ -0.52
POLR2J3-221ENST00000621093 ZNF576Q9H609 170 aa11.8□□□□□ -0.52
POLR2J3-221ENST00000621093 ALG13Q9NP73 1137 aaKnown RBP11.8□□□□□ -0.52
POLR2J3-221ENST00000621093 AAASQ9NRG9 546 aa11.8□□□□□ -0.52
POLR2J3-221ENST00000621093 TAB2Q9NYJ8 693 aa11.8□□□□□ -0.52
POLR2J3-221ENST00000621093 SPG21Q9NZD8 308 aa11.8□□□□□ -0.52
POLR2J3-221ENST00000621093 MAGEC2Q9UBF1 373 aaPredicted RBP11.8□□□□□ -0.52
POLR2J3-221ENST00000621093 PCDHB12Q9Y5F1 795 aa11.8□□□□□ -0.52
POLR2J3-221ENST00000621093 PLXNA3P51805 1871 aa11.79□□□□□ -0.52
POLR2J3-221ENST00000621093 SMTNL1A8MU46 457 aa11.79□□□□□ -0.52
POLR2J3-221ENST00000621093 GRM6O15303 877 aa11.79□□□□□ -0.52
POLR2J3-221ENST00000621093 PHACTR2O75167 634 aa11.79□□□□□ -0.52
POLR2J3-221ENST00000621093 TADA2AO75478 443 aa11.79□□□□□ -0.52
POLR2J3-221ENST00000621093 FGF18O76093 207 aa11.79□□□□□ -0.52
POLR2J3-221ENST00000621093 B3GAT3O94766 335 aa11.79□□□□□ -0.52
POLR2J3-221ENST00000621093 HLA-DRAP01903 254 aa11.79□□□□□ -0.52
POLR2J3-221ENST00000621093 ZNF18P17022 549 aa11.79□□□□□ -0.52
POLR2J3-221ENST00000621093 DNAJB1P25685 340 aa11.79□□□□□ -0.52
POLR2J3-221ENST00000621093 RPL9P32969 192 aaKnown RBP11.79□□□□□ -0.52
POLR2J3-221ENST00000621093 MYL6P60660 151 aa11.79□□□□□ -0.52
POLR2J3-221ENST00000621093 ENPEPQ07075 957 aa11.79□□□□□ -0.52
POLR2J3-221ENST00000621093 KCNH2Q12809 1159 aa11.79□□□□□ -0.52
POLR2J3-221ENST00000621093 GPM6BQ13491 265 aa11.79□□□□□ -0.52
POLR2J3-221ENST00000621093 KRT31Q15323 416 aa11.79□□□□□ -0.52
POLR2J3-221ENST00000621093 ZACNQ401N2 412 aa11.79□□□□□ -0.52
POLR2J3-221ENST00000621093 TIGD5Q53EQ6 642 aa11.79□□□□□ -0.52
POLR2J3-221ENST00000621093 DCLRE1AQ6PJP8 1040 aa11.79□□□□□ -0.52
POLR2J3-221ENST00000621093 FAM114A1Q8IWE2 563 aa11.79□□□□□ -0.52
POLR2J3-221ENST00000621093 RNF214Q8ND24 703 aa11.79□□□□□ -0.52
POLR2J3-221ENST00000621093 SPPL3Q8TCT6 385 aa11.79□□□□□ -0.52
POLR2J3-221ENST00000621093 TAS1R2Q8TE23 839 aa11.79□□□□□ -0.52
POLR2J3-221ENST00000621093 GDPD5Q8WTR4 605 aa11.79□□□□□ -0.52
POLR2J3-221ENST00000621093 SEMA4DQ92854 862 aa11.79□□□□□ -0.52
POLR2J3-221ENST00000621093 DDX27Q96GQ7 796 aaKnown RBP11.79□□□□□ -0.52
POLR2J3-221ENST00000621093 B3GALT6Q96L58 329 aa11.79□□□□□ -0.52
POLR2J3-221ENST00000621093 FAM161BQ96MY7 647 aa11.79□□□□□ -0.52
POLR2J3-221ENST00000621093 PI4K2AQ9BTU6 479 aa11.79□□□□□ -0.52
POLR2J3-221ENST00000621093 TMEM8AQ9HCN3 771 aa11.79□□□□□ -0.52
POLR2J3-221ENST00000621093 ADAM28Q9UKQ2 775 aa11.79□□□□□ -0.52
POLR2J3-221ENST00000621093 ITGA11Q9UKX5 1188 aa11.79□□□□□ -0.52
POLR2J3-221ENST00000621093 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.79□□□□□ -0.52
POLR2J3-221ENST00000621093 MYO9BQ13459 2157 aa11.79□□□□□ -0.52
POLR2J3-221ENST00000621093 BECN2A8MW95 431 aa11.78□□□□□ -0.52
POLR2J3-221ENST00000621093 C5orf67F2Z3F1 127 aa11.78□□□□□ -0.52
POLR2J3-221ENST00000621093 TMEM189-UBE2V1I3L0A0 370 aa11.78□□□□□ -0.52
POLR2J3-221ENST00000621093 EFEMP2O95967 443 aa11.78□□□□□ -0.52
POLR2J3-221ENST00000621093 FMO5P49326 533 aa11.78□□□□□ -0.52
POLR2J3-221ENST00000621093 MXI1P50539 228 aa11.78□□□□□ -0.52
POLR2J3-221ENST00000621093 RBP5P82980 135 aa11.78□□□□□ -0.52
POLR2J3-221ENST00000621093 MIIPQ5JXC2 388 aa11.78□□□□□ -0.52
POLR2J3-221ENST00000621093 SPOPLQ6IQ16 392 aa11.78□□□□□ -0.52
POLR2J3-221ENST00000621093 FUT10Q6P4F1 479 aa11.78□□□□□ -0.52
POLR2J3-221ENST00000621093 Q7L0L9 218 aa11.78□□□□□ -0.52
POLR2J3-221ENST00000621093 USP37Q86T82 979 aa11.78□□□□□ -0.52
POLR2J3-221ENST00000621093 FAM200AQ8TCP9 573 aa11.78□□□□□ -0.52
POLR2J3-221ENST00000621093 TMEM169Q96HH4 297 aa11.78□□□□□ -0.52
POLR2J3-221ENST00000621093 SAMD11Q96NU1 681 aa11.78□□□□□ -0.52
POLR2J3-221ENST00000621093 TUBGCP2Q9BSJ2 902 aa11.78□□□□□ -0.52
POLR2J3-221ENST00000621093 PLVAPQ9BX97 442 aa11.78□□□□□ -0.52
POLR2J3-221ENST00000621093 VPS16Q9H269 839 aa11.78□□□□□ -0.52
POLR2J3-221ENST00000621093 RWDD3Q9Y3V2 267 aa11.78□□□□□ -0.52
POLR2J3-221ENST00000621093 PCDHGC5Q9Y5F6 944 aa11.78□□□□□ -0.52
POLR2J3-221ENST00000621093 H3BNC9 293 aa11.77□□□□□ -0.53
POLR2J3-221ENST00000621093 LPXNO60711 386 aa11.77□□□□□ -0.53
POLR2J3-221ENST00000621093 AFPP02771 609 aaKnown RBP11.77□□□□□ -0.53
POLR2J3-221ENST00000621093 RB1P06400 928 aa11.77□□□□□ -0.53
POLR2J3-221ENST00000621093 PRKCSHP14314 528 aaPredicted RBP11.77□□□□□ -0.53
POLR2J3-221ENST00000621093 CDK11BP21127 795 aaKnown RBP11.77□□□□□ -0.53
POLR2J3-221ENST00000621093 EEF1GP26641 437 aaKnown RBP11.77□□□□□ -0.53
POLR2J3-221ENST00000621093 GTF2H1P32780 548 aa11.77□□□□□ -0.53
POLR2J3-221ENST00000621093 PIK3CAP42336 1068 aa11.77□□□□□ -0.53
POLR2J3-221ENST00000621093 TAF6P49848 677 aa11.77□□□□□ -0.53
POLR2J3-221ENST00000621093 COPB1P53618 953 aaKnown RBP11.77□□□□□ -0.53
POLR2J3-221ENST00000621093 AP3M2P53677 418 aa11.77□□□□□ -0.53
POLR2J3-221ENST00000621093 LILRA4P59901 499 aa11.77□□□□□ -0.53
POLR2J3-221ENST00000621093 ERVFC1P60507 584 aa11.77□□□□□ -0.53
POLR2J3-221ENST00000621093 MYL7Q01449 175 aa11.77□□□□□ -0.53
POLR2J3-221ENST00000621093 PLCB3Q01970 1234 aa11.77□□□□□ -0.53
POLR2J3-221ENST00000621093 TRPC3Q13507 836 aa11.77□□□□□ -0.53
POLR2J3-221ENST00000621093 NCOA4Q13772 614 aa11.77□□□□□ -0.53
POLR2J3-221ENST00000621093 CAMK1Q14012 370 aa11.77□□□□□ -0.53
POLR2J3-221ENST00000621093 GRIN2CQ14957 1233 aa11.77□□□□□ -0.53
POLR2J3-221ENST00000621093 MAN2A1Q16706 1144 aa11.77□□□□□ -0.53
POLR2J3-221ENST00000621093 VWA3BQ502W6 1294 aa11.77□□□□□ -0.53
POLR2J3-221ENST00000621093 KRT39Q6A163 491 aa11.77□□□□□ -0.53
POLR2J3-221ENST00000621093 APTXQ7Z2E3 356 aaKnown RBP11.77□□□□□ -0.53
POLR2J3-221ENST00000621093 DDX53Q86TM3 631 aaKnown RBP11.77□□□□□ -0.53
POLR2J3-221ENST00000621093 RNF168Q8IYW5 571 aaPredicted RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms