RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 RNF19AQ9NV58 838 aa10.62□□□□□ -0.71
VTA1-205ENST00000620996 PCDHB2Q9Y5E7 798 aa10.62□□□□□ -0.71
VTA1-205ENST00000620996 LACTBL1A8MY62 500 aa10.62□□□□□ -0.71
VTA1-205ENST00000620996 KRIT1O00522 736 aa10.62□□□□□ -0.71
VTA1-205ENST00000620996 SMIM10L2AP0DMW4 78 aa10.62□□□□□ -0.71
VTA1-205ENST00000620996 SMIM10L2BP0DMW5 78 aa10.62□□□□□ -0.71
VTA1-205ENST00000620996 GJC1P36383 396 aa10.62□□□□□ -0.71
VTA1-205ENST00000620996 RGS2P41220 211 aa10.62□□□□□ -0.71
VTA1-205ENST00000620996 GUCY2FP51841 1108 aa10.62□□□□□ -0.71
VTA1-205ENST00000620996 SURF1Q15526 300 aa10.62□□□□□ -0.71
VTA1-205ENST00000620996 POLIQ9UNA4 740 aa10.62□□□□□ -0.71
VTA1-205ENST00000620996 TNFSF13BQ9Y275 285 aa10.62□□□□□ -0.71
VTA1-205ENST00000620996 NOC2LQ9Y3T9 749 aaKnown RBP10.62□□□□□ -0.71
VTA1-205ENST00000620996 CENPFP49454 3210 aa10.61□□□□□ -0.71
VTA1-205ENST00000620996 ESYT3A0FGR9 886 aa10.61□□□□□ -0.71
VTA1-205ENST00000620996 PGRMC1O00264 195 aaKnown RBP10.61□□□□□ -0.71
VTA1-205ENST00000620996 CFHP08603 1231 aa10.61□□□□□ -0.71
VTA1-205ENST00000620996 CLDN10P78369 228 aa10.61□□□□□ -0.71
VTA1-205ENST00000620996 CLEC16AQ2KHT3 1053 aa10.61□□□□□ -0.71
VTA1-205ENST00000620996 ZFYVE27Q5T4F4 411 aa10.61□□□□□ -0.71
VTA1-205ENST00000620996 EMID1Q96A84 441 aaPredicted RBP10.61□□□□□ -0.71
VTA1-205ENST00000620996 PBKQ96KB5 322 aa10.61□□□□□ -0.71
VTA1-205ENST00000620996 TRIM6Q9C030 488 aaPredicted RBP10.61□□□□□ -0.71
VTA1-205ENST00000620996 ISCUQ9H1K1 167 aa10.61□□□□□ -0.71
VTA1-205ENST00000620996 PDZD7Q9H5P4 517 aa10.61□□□□□ -0.71
VTA1-205ENST00000620996 ALG6Q9Y672 507 aa10.61□□□□□ -0.71
VTA1-205ENST00000620996 NPTXRO95502 500 aa10.61□□□□□ -0.71
VTA1-205ENST00000620996 ITGB3P05106 788 aa10.61□□□□□ -0.71
VTA1-205ENST00000620996 C6orf222P0C671 652 aaPredicted RBP10.61□□□□□ -0.71
VTA1-205ENST00000620996 MCM3P25205 808 aa10.61□□□□□ -0.71
VTA1-205ENST00000620996 TNNC1P63316 161 aa10.61□□□□□ -0.71
VTA1-205ENST00000620996 MFSD10Q14728 455 aa10.61□□□□□ -0.71
VTA1-205ENST00000620996 WDR72Q3MJ13 1102 aa10.61□□□□□ -0.71
VTA1-205ENST00000620996 MORN1Q5T089 497 aa10.61□□□□□ -0.71
VTA1-205ENST00000620996 JADE1Q6IE81 842 aa10.61□□□□□ -0.71
VTA1-205ENST00000620996 ACAD10Q6JQN1 1059 aa10.61□□□□□ -0.71
VTA1-205ENST00000620996 ZIC5Q96T25 663 aa10.61□□□□□ -0.71
VTA1-205ENST00000620996 DMGDHQ9UI17 866 aaKnown RBP10.61□□□□□ -0.71
VTA1-205ENST00000620996 ANAPC7Q9UJX3 599 aa10.61□□□□□ -0.71
VTA1-205ENST00000620996 ANKRD65E5RJM6 399 aa10.6□□□□□ -0.71
VTA1-205ENST00000620996 MYO1CO00159 1063 aa10.6□□□□□ -0.71
VTA1-205ENST00000620996 FAM189A1O60320 539 aa10.6□□□□□ -0.71
VTA1-205ENST00000620996 FGGP02679 453 aa10.6□□□□□ -0.71
VTA1-205ENST00000620996 HOXC6P09630 235 aa10.6□□□□□ -0.71
VTA1-205ENST00000620996 GZMAP12544 262 aa10.6□□□□□ -0.71
VTA1-205ENST00000620996 COMTP21964 271 aa10.6□□□□□ -0.71
VTA1-205ENST00000620996 AP3M2P53677 418 aa10.6□□□□□ -0.71
VTA1-205ENST00000620996 ZNF200P98182 395 aaPredicted RBP10.6□□□□□ -0.71
VTA1-205ENST00000620996 GUCY2DQ02846 1103 aa10.6□□□□□ -0.71
VTA1-205ENST00000620996 SGSM1Q2NKQ1 1148 aa10.6□□□□□ -0.71
VTA1-205ENST00000620996 MAP9Q49MG5 647 aa10.6□□□□□ -0.71
VTA1-205ENST00000620996 CPNE8Q86YQ8 564 aa10.6□□□□□ -0.71
VTA1-205ENST00000620996 EGFL6Q8IUX8 553 aa10.6□□□□□ -0.71
VTA1-205ENST00000620996 UBL4BQ8N7F7 174 aa10.6□□□□□ -0.71
VTA1-205ENST00000620996 DNAJB3Q8WWF6 145 aa10.6□□□□□ -0.71
VTA1-205ENST00000620996 NIF3L1Q9GZT8 377 aa10.6□□□□□ -0.71
VTA1-205ENST00000620996 ABLIM1O14639 778 aa10.6□□□□□ -0.71
VTA1-205ENST00000620996 SASH3O75995 380 aa10.6□□□□□ -0.71
VTA1-205ENST00000620996 HEXIM1O94992 359 aaKnown RBP10.6□□□□□ -0.71
VTA1-205ENST00000620996 FAM47CQ5HY64 1035 aa10.6□□□□□ -0.71
VTA1-205ENST00000620996 MARCH8Q5T0T0 291 aa10.6□□□□□ -0.71
VTA1-205ENST00000620996 MMGT1Q8N4V1 131 aa10.6□□□□□ -0.71
VTA1-205ENST00000620996 USP38Q8NB14 1042 aa10.6□□□□□ -0.71
VTA1-205ENST00000620996 DDX1Q92499 740 aaKnown RBP10.6□□□□□ -0.71
VTA1-205ENST00000620996 DDX47Q9H0S4 455 aaKnown RBP10.6□□□□□ -0.71
VTA1-205ENST00000620996 CISHQ9NSE2 258 aa10.6□□□□□ -0.71
VTA1-205ENST00000620996 RNF14Q9UBS8 474 aa10.6□□□□□ -0.71
VTA1-205ENST00000620996 RAB21Q9UL25 225 aa10.6□□□□□ -0.71
VTA1-205ENST00000620996 USTQ9Y2C2 406 aa10.6□□□□□ -0.71
VTA1-205ENST00000620996 COL1A2P08123 1366 aa10.6□□□□□ -0.71
VTA1-205ENST00000620996 TSPAN1O60635 241 aa10.6□□□□□ -0.71
VTA1-205ENST00000620996 ASS1P00966 412 aaKnown RBP10.6□□□□□ -0.71
VTA1-205ENST00000620996 RRM1P23921 792 aa10.6□□□□□ -0.71
VTA1-205ENST00000620996 MARCKSL1P49006 195 aa10.6□□□□□ -0.71
VTA1-205ENST00000620996 CDH8P55286 799 aa10.6□□□□□ -0.71
VTA1-205ENST00000620996 LACTBP83111 547 aaPredicted RBP10.6□□□□□ -0.71
VTA1-205ENST00000620996 ENPEPQ07075 957 aa10.6□□□□□ -0.71
VTA1-205ENST00000620996 ZNF667Q5HYK9 610 aa10.6□□□□□ -0.71
VTA1-205ENST00000620996 AADACL2Q6P093 401 aa10.6□□□□□ -0.71
VTA1-205ENST00000620996 RUFY4Q6ZNE9 571 aa10.6□□□□□ -0.71
VTA1-205ENST00000620996 MMS22LQ6ZRQ5 1243 aa10.6□□□□□ -0.71
VTA1-205ENST00000620996 HDXQ7Z353 690 aa10.6□□□□□ -0.71
VTA1-205ENST00000620996 ACAP3Q96P50 834 aa10.6□□□□□ -0.71
VTA1-205ENST00000620996 GCOM2Q9BZD3 368 aaPredicted RBP10.6□□□□□ -0.71
VTA1-205ENST00000620996 PTPRHQ9HD43 1115 aa10.6□□□□□ -0.71
VTA1-205ENST00000620996 ADAM22Q9P0K1 906 aa10.6□□□□□ -0.71
VTA1-205ENST00000620996 HES2Q9Y543 173 aa10.6□□□□□ -0.71
VTA1-205ENST00000620996 ZSCAN5CA6NGD5 496 aaPredicted RBP10.59□□□□□ -0.71
VTA1-205ENST00000620996 ZRANB2O95218 330 aaKnown RBP eCLIP10.59□□□□□ -0.71
VTA1-205ENST00000620996 IL18RAPO95256 599 aa10.59□□□□□ -0.71
VTA1-205ENST00000620996 GJB6O95452 261 aa10.59□□□□□ -0.71
VTA1-205ENST00000620996 MCF2P10911 925 aa10.59□□□□□ -0.71
VTA1-205ENST00000620996 ACO1P21399 889 aaKnown RBP10.59□□□□□ -0.71
VTA1-205ENST00000620996 PROZP22891 400 aa10.59□□□□□ -0.71
VTA1-205ENST00000620996 PSEN2P49810 448 aa10.59□□□□□ -0.71
VTA1-205ENST00000620996 CPT1AP50416 773 aa10.59□□□□□ -0.71
VTA1-205ENST00000620996 SREBF2Q12772 1141 aa10.59□□□□□ -0.71
VTA1-205ENST00000620996 TMEM132DQ14C87 1099 aa10.59□□□□□ -0.71
VTA1-205ENST00000620996 LIN9Q5TKA1 542 aa10.59□□□□□ -0.71
VTA1-205ENST00000620996 C17orf99Q6UX52 265 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms