RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 KCNH4Q9UQ05 1017 aa8.77□□□□□ -1.01
PTPDC1-204ENST00000620992 MCF2LO15068 1137 aa8.77□□□□□ -1.01
PTPDC1-204ENST00000620992 TBX3O15119 743 aa8.77□□□□□ -1.01
PTPDC1-204ENST00000620992 SLC16A3O15427 465 aaKnown RBP8.77□□□□□ -1.01
PTPDC1-204ENST00000620992 TGFB1I1O43294 461 aa8.77□□□□□ -1.01
PTPDC1-204ENST00000620992 ZBED1O96006 694 aa8.77□□□□□ -1.01
PTPDC1-204ENST00000620992 CYP2C9P11712 490 aa8.77□□□□□ -1.01
PTPDC1-204ENST00000620992 PRKCIP41743 596 aa8.77□□□□□ -1.01
PTPDC1-204ENST00000620992 OR1G1P47890 313 aa8.77□□□□□ -1.01
PTPDC1-204ENST00000620992 CBWD6Q4V339 395 aa8.77□□□□□ -1.01
PTPDC1-204ENST00000620992 CBWD3Q5JTY5 395 aa8.77□□□□□ -1.01
PTPDC1-204ENST00000620992 CBWD5Q5RIA9 395 aa8.77□□□□□ -1.01
PTPDC1-204ENST00000620992 HHIPL2Q6UWX4 724 aa8.77□□□□□ -1.01
PTPDC1-204ENST00000620992 DEFB128Q7Z7B8 93 aa8.77□□□□□ -1.01
PTPDC1-204ENST00000620992 PGBD3Q8N328 593 aa8.77□□□□□ -1.01
PTPDC1-204ENST00000620992 RFFLQ8WZ73 363 aa8.77□□□□□ -1.01
PTPDC1-204ENST00000620992 LENG9Q96B70 501 aa8.77□□□□□ -1.01
PTPDC1-204ENST00000620992 ATXN7L3BQ96GX2 97 aa8.77□□□□□ -1.01
PTPDC1-204ENST00000620992 GCNAQ96QF7 691 aa8.77□□□□□ -1.01
PTPDC1-204ENST00000620992 LBHD1Q9BQE6 289 aaPredicted RBP8.77□□□□□ -1.01
PTPDC1-204ENST00000620992 SIX2Q9NPC8 291 aa8.77□□□□□ -1.01
PTPDC1-204ENST00000620992 TAS2R14Q9NYV8 317 aa8.77□□□□□ -1.01
PTPDC1-204ENST00000620992 GMNCA6NCL1 334 aa8.76□□□□□ -1.01
PTPDC1-204ENST00000620992 DCDC2CA8MYV0 355 aa8.76□□□□□ -1.01
PTPDC1-204ENST00000620992 FAM107AO95990 144 aa8.76□□□□□ -1.01
PTPDC1-204ENST00000620992 WEE2P0C1S8 567 aa8.76□□□□□ -1.01
PTPDC1-204ENST00000620992 HNRNPH1P31943 449 aaKnown RBP8.76□□□□□ -1.01
PTPDC1-204ENST00000620992 CIITAP33076 1130 aa8.76□□□□□ -1.01
PTPDC1-204ENST00000620992 CLCN3P51790 818 aa8.76□□□□□ -1.01
PTPDC1-204ENST00000620992 IL1RL1Q01638 556 aa8.76□□□□□ -1.01
PTPDC1-204ENST00000620992 RCN2Q14257 317 aa8.76□□□□□ -1.01
PTPDC1-204ENST00000620992 KIZQ2M2Z5 673 aa8.76□□□□□ -1.01
PTPDC1-204ENST00000620992 Q4G0T1 1027 aa8.76□□□□□ -1.01
PTPDC1-204ENST00000620992 AADACL2Q6P093 401 aa8.76□□□□□ -1.01
PTPDC1-204ENST00000620992 ZC3H18Q86VM9 953 aaKnown RBP8.76□□□□□ -1.01
PTPDC1-204ENST00000620992 CD302Q8IX05 232 aa8.76□□□□□ -1.01
PTPDC1-204ENST00000620992 BBS5Q8N3I7 341 aa8.76□□□□□ -1.01
PTPDC1-204ENST00000620992 MDM1Q8TC05 714 aa8.76□□□□□ -1.01
PTPDC1-204ENST00000620992 DPF3Q92784 378 aa8.76□□□□□ -1.01
PTPDC1-204ENST00000620992 ARHGEF26Q96DR7 871 aa8.76□□□□□ -1.01
PTPDC1-204ENST00000620992 CYFIP2Q96F07 1278 aa8.76□□□□□ -1.01
PTPDC1-204ENST00000620992 CFAP36Q96G28 342 aa8.76□□□□□ -1.01
PTPDC1-204ENST00000620992 INTS2Q9H0H0 1204 aaKnown RBP8.76□□□□□ -1.01
PTPDC1-204ENST00000620992 FAM114A2Q9NRY5 505 aa8.76□□□□□ -1.01
PTPDC1-204ENST00000620992 TMEM59LQ9UK28 342 aa8.76□□□□□ -1.01
PTPDC1-204ENST00000620992 ANGPTL3Q9Y5C1 460 aa8.76□□□□□ -1.01
PTPDC1-204ENST00000620992 GPC4O75487 556 aa8.76□□□□□ -1.01
PTPDC1-204ENST00000620992 DNAJB2P25686 324 aa8.76□□□□□ -1.01
PTPDC1-204ENST00000620992 HOXA10P31260 410 aaPredicted RBP8.76□□□□□ -1.01
PTPDC1-204ENST00000620992 RECQLP46063 649 aaPredicted RBP8.76□□□□□ -1.01
PTPDC1-204ENST00000620992 PSMC1P62191 440 aaKnown RBP8.76□□□□□ -1.01
PTPDC1-204ENST00000620992 PPP2R2AP63151 447 aa8.76□□□□□ -1.01
PTPDC1-204ENST00000620992 RNF219Q5W0B1 726 aaPredicted RBP8.76□□□□□ -1.01
PTPDC1-204ENST00000620992 MOXD1Q6UVY6 613 aa8.76□□□□□ -1.01
PTPDC1-204ENST00000620992 EPM2AIP1Q7L775 607 aaPredicted RBP8.76□□□□□ -1.01
PTPDC1-204ENST00000620992 FBXO16Q8IX29 292 aaPredicted RBP8.76□□□□□ -1.01
PTPDC1-204ENST00000620992 GPRC5AQ8NFJ5 357 aa8.76□□□□□ -1.01
PTPDC1-204ENST00000620992 AGAP3Q96P47 875 aa8.76□□□□□ -1.01
PTPDC1-204ENST00000620992 STK33Q9BYT3 514 aa8.76□□□□□ -1.01
PTPDC1-204ENST00000620992 MTFR1LQ9H019 292 aa8.76□□□□□ -1.01
PTPDC1-204ENST00000620992 OLA1Q9NTK5 396 aaKnown RBP8.76□□□□□ -1.01
PTPDC1-204ENST00000620992 IGSF9BQ9UPX0 1349 aa8.76□□□□□ -1.01
PTPDC1-204ENST00000620992 BTNL10A8MVZ5 291 aa8.76□□□□□ -1.01
PTPDC1-204ENST00000620992 VAMP7P51809 220 aa8.76□□□□□ -1.01
PTPDC1-204ENST00000620992 SOX10P56693 466 aa8.76□□□□□ -1.01
PTPDC1-204ENST00000620992 SESN3P58005 492 aa8.76□□□□□ -1.01
PTPDC1-204ENST00000620992 KRT33BQ14525 404 aa8.76□□□□□ -1.01
PTPDC1-204ENST00000620992 FAM102AQ5T9C2 384 aaPredicted RBP8.76□□□□□ -1.01
PTPDC1-204ENST00000620992 SLFN12LQ6IEE8 588 aa8.76□□□□□ -1.01
PTPDC1-204ENST00000620992 LRIG3Q6UXM1 1119 aa8.76□□□□□ -1.01
PTPDC1-204ENST00000620992 SZRD1Q7Z422 152 aa8.76□□□□□ -1.01
PTPDC1-204ENST00000620992 PALB2Q86YC2 1186 aa8.76□□□□□ -1.01
PTPDC1-204ENST00000620992 TCP11Q8WWU5 503 aa8.76□□□□□ -1.01
PTPDC1-204ENST00000620992 SEPT1Q8WYJ6 367 aa8.76□□□□□ -1.01
PTPDC1-204ENST00000620992 GLT1D1Q96MS3 346 aa8.76□□□□□ -1.01
PTPDC1-204ENST00000620992 DHX35Q9H5Z1 703 aaKnown RBP8.76□□□□□ -1.01
PTPDC1-204ENST00000620992 SYNDIG1Q9H7V2 258 aa8.76□□□□□ -1.01
PTPDC1-204ENST00000620992 ZFYVE28Q9HCC9 887 aa8.76□□□□□ -1.01
PTPDC1-204ENST00000620992 GINM1Q9NU53 330 aa8.76□□□□□ -1.01
PTPDC1-204ENST00000620992 SPTA1P02549 2419 aa8.75□□□□□ -1.01
PTPDC1-204ENST00000620992 AHDC1Q5TGY3 1603 aaPredicted RBP8.75□□□□□ -1.01
PTPDC1-204ENST00000620992 PHF20L1A8MW92 1017 aa8.75□□□□□ -1.01
PTPDC1-204ENST00000620992 TADA2AO75478 443 aa8.75□□□□□ -1.01
PTPDC1-204ENST00000620992 CPP00450 1065 aa8.75□□□□□ -1.01
PTPDC1-204ENST00000620992 ECHS1P30084 290 aa8.75□□□□□ -1.01
PTPDC1-204ENST00000620992 GPC3P51654 580 aa8.75□□□□□ -1.01
PTPDC1-204ENST00000620992 TSPY1Q01534 308 aa8.75□□□□□ -1.01
PTPDC1-204ENST00000620992 TMC3Q7Z5M5 1100 aa8.75□□□□□ -1.01
PTPDC1-204ENST00000620992 SPATS2Q86XZ4 545 aaKnown RBP8.75□□□□□ -1.01
PTPDC1-204ENST00000620992 KLHL8Q9P2G9 620 aaPredicted RBP8.75□□□□□ -1.01
PTPDC1-204ENST00000620992 BAIAP2L1Q9UHR4 511 aa8.75□□□□□ -1.01
PTPDC1-204ENST00000620992 VAV3Q9UKW4 847 aa8.75□□□□□ -1.01
PTPDC1-204ENST00000620992 FOXN3O00409 490 aaPredicted RBP8.75□□□□□ -1.01
PTPDC1-204ENST00000620992 CES2O00748 559 aa8.75□□□□□ -1.01
PTPDC1-204ENST00000620992 CYP26A1O43174 497 aa8.75□□□□□ -1.01
PTPDC1-204ENST00000620992 SLITRK3O94933 977 aa8.75□□□□□ -1.01
PTPDC1-204ENST00000620992 BCAR1P56945 870 aa8.75□□□□□ -1.01
PTPDC1-204ENST00000620992 JAM2P57087 298 aa8.75□□□□□ -1.01
PTPDC1-204ENST00000620992 ZC3H3Q8IXZ2 948 aaKnown RBP8.75□□□□□ -1.01
PTPDC1-204ENST00000620992 CCDC33Q8N5R6 958 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms