RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 PDILTQ8N807 584 aa18.67■□□□□ 0.58
HMGN3-203ENST00000620514 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.67■□□□□ 0.58
HMGN3-203ENST00000620514 DNMT3BQ9UBC3 853 aaKnown RBP18.67■□□□□ 0.58
HMGN3-203ENST00000620514 DUSP12Q9UNI6 340 aa18.67■□□□□ 0.58
HMGN3-203ENST00000620514 H7C4K7 107 aa18.66■□□□□ 0.58
HMGN3-203ENST00000620514 PPEF2O14830 753 aa18.66■□□□□ 0.58
HMGN3-203ENST00000620514 XYLBO75191 536 aa18.66■□□□□ 0.58
HMGN3-203ENST00000620514 PPP1R37O75864 691 aa18.66■□□□□ 0.58
HMGN3-203ENST00000620514 ABLIM3O94929 683 aa18.66■□□□□ 0.58
HMGN3-203ENST00000620514 CYP3A5P20815 502 aa18.66■□□□□ 0.58
HMGN3-203ENST00000620514 ACOT2P49753 483 aa18.66■□□□□ 0.58
HMGN3-203ENST00000620514 KCNA1Q09470 495 aa18.66■□□□□ 0.58
HMGN3-203ENST00000620514 ADALQ6DHV7 355 aa18.66■□□□□ 0.58
HMGN3-203ENST00000620514 JADE1Q6IE81 842 aa18.66■□□□□ 0.58
HMGN3-203ENST00000620514 HSCBQ8IWL3 235 aa18.66■□□□□ 0.58
HMGN3-203ENST00000620514 ZNF461Q8TAF7 563 aa18.66■□□□□ 0.58
HMGN3-203ENST00000620514 ITFG1Q8TB96 612 aa18.66■□□□□ 0.58
HMGN3-203ENST00000620514 STRA6Q9BX79 667 aa18.66■□□□□ 0.58
HMGN3-203ENST00000620514 MRPL44Q9H9J2 332 aaKnown RBP18.66■□□□□ 0.58
HMGN3-203ENST00000620514 PCDHB8Q9UN66 801 aa18.66■□□□□ 0.58
HMGN3-203ENST00000620514 TIMM13Q9Y5L4 95 aaPredicted RBP18.66■□□□□ 0.58
HMGN3-203ENST00000620514 MYH15Q9Y2K3 1946 aa18.66■□□□□ 0.58
HMGN3-203ENST00000620514 SPTLC2O15270 562 aa18.65■□□□□ 0.58
HMGN3-203ENST00000620514 SEC24AO95486 1093 aa18.65■□□□□ 0.58
HMGN3-203ENST00000620514 NFICP08651 508 aa18.65■□□□□ 0.58
HMGN3-203ENST00000620514 POU2F2P09086 479 aa18.65■□□□□ 0.58
HMGN3-203ENST00000620514 IDEP14735 1019 aa18.65■□□□□ 0.58
HMGN3-203ENST00000620514 ABCD1P33897 745 aa18.65■□□□□ 0.58
HMGN3-203ENST00000620514 CASP5P51878 434 aa18.65■□□□□ 0.58
HMGN3-203ENST00000620514 FOXD4L6Q3SYB3 417 aaPredicted RBP18.65■□□□□ 0.58
HMGN3-203ENST00000620514 FOXD4L3Q6VB84 417 aaPredicted RBP18.65■□□□□ 0.58
HMGN3-203ENST00000620514 SLC44A3Q8N4M1 653 aa18.65■□□□□ 0.58
HMGN3-203ENST00000620514 APPL2Q8NEU8 664 aa18.65■□□□□ 0.58
HMGN3-203ENST00000620514 FGFBP2Q9BYJ0 223 aa18.65■□□□□ 0.58
HMGN3-203ENST00000620514 STYXL1Q9Y6J8 313 aa18.65■□□□□ 0.58
HMGN3-203ENST00000620514 ANHXE9PGG2 379 aa18.64■□□□□ 0.57
HMGN3-203ENST00000620514 M0QZQ0 153 aa18.64■□□□□ 0.57
HMGN3-203ENST00000620514 XPOTO43592 962 aaKnown RBP18.64■□□□□ 0.57
HMGN3-203ENST00000620514 CFHP08603 1231 aa18.64■□□□□ 0.57
HMGN3-203ENST00000620514 GAP43P17677 238 aa18.64■□□□□ 0.57
HMGN3-203ENST00000620514 ADSSP30520 456 aa18.64■□□□□ 0.57
HMGN3-203ENST00000620514 HOXD11P31277 338 aaPredicted RBP18.64■□□□□ 0.57
HMGN3-203ENST00000620514 AARSP49588 968 aaKnown RBP eCLIP18.64■□□□□ 0.57
HMGN3-203ENST00000620514 TCF15Q12870 199 aa18.64■□□□□ 0.57
HMGN3-203ENST00000620514 HTR4Q13639 388 aa18.64■□□□□ 0.57
HMGN3-203ENST00000620514 SPATA1Q5VX52 437 aa18.64■□□□□ 0.57
HMGN3-203ENST00000620514 SLFN12LQ6IEE8 588 aa18.64■□□□□ 0.57
HMGN3-203ENST00000620514 ZNF280DQ6N043 979 aa18.64■□□□□ 0.57
HMGN3-203ENST00000620514 TMEM105Q8N8V8 129 aa18.64■□□□□ 0.57
HMGN3-203ENST00000620514 HVCN1Q96D96 273 aa18.64■□□□□ 0.57
HMGN3-203ENST00000620514 ZNF396Q96N95 335 aaPredicted RBP18.64■□□□□ 0.57
HMGN3-203ENST00000620514 RPP25Q9BUL9 199 aaKnown RBP18.64■□□□□ 0.57
HMGN3-203ENST00000620514 SEL1LQ9UBV2 794 aa18.64■□□□□ 0.57
HMGN3-203ENST00000620514 AGO2Q9UKV8 859 aaKnown RBP18.64■□□□□ 0.57
HMGN3-203ENST00000620514 CDH7Q9ULB5 785 aa18.64■□□□□ 0.57
HMGN3-203ENST00000620514 GTF3C3Q9Y5Q9 886 aa18.64■□□□□ 0.57
HMGN3-203ENST00000620514 NUMBLQ9Y6R0 609 aa18.64■□□□□ 0.57
HMGN3-203ENST00000620514 NOTCH4Q99466 2003 aa18.64■□□□□ 0.57
HMGN3-203ENST00000620514 ARHGEF37A1IGU5 675 aa18.63■□□□□ 0.57
HMGN3-203ENST00000620514 PRRG1O14668 218 aa18.63■□□□□ 0.57
HMGN3-203ENST00000620514 GCNT3O95395 438 aa18.63■□□□□ 0.57
HMGN3-203ENST00000620514 ATF2P15336 505 aa18.63■□□□□ 0.57
HMGN3-203ENST00000620514 ELF1P32519 619 aa18.63■□□□□ 0.57
HMGN3-203ENST00000620514 PABPC1LQ4VXU2 614 aaKnown RBP18.63■□□□□ 0.57
HMGN3-203ENST00000620514 L1TD1Q5T7N2 865 aaKnown RBP18.63■□□□□ 0.57
HMGN3-203ENST00000620514 PARM1Q6UWI2 310 aa18.63■□□□□ 0.57
HMGN3-203ENST00000620514 CRELD2Q6UXH1 353 aaPredicted RBP18.63■□□□□ 0.57
HMGN3-203ENST00000620514 DSTYKQ6XUX3 929 aa18.63■□□□□ 0.57
HMGN3-203ENST00000620514 RTL10Q7L3V2 364 aa18.63■□□□□ 0.57
HMGN3-203ENST00000620514 CD302Q8IX05 232 aa18.63■□□□□ 0.57
HMGN3-203ENST00000620514 SPRYD3Q8NCJ5 442 aa18.63■□□□□ 0.57
HMGN3-203ENST00000620514 FLCNQ8NFG4 579 aa18.63■□□□□ 0.57
HMGN3-203ENST00000620514 BEST2Q8NFU1 509 aa18.63■□□□□ 0.57
HMGN3-203ENST00000620514 ING5Q8WYH8 240 aa18.63■□□□□ 0.57
HMGN3-203ENST00000620514 POMGNT1Q8WZA1 660 aa18.63■□□□□ 0.57
HMGN3-203ENST00000620514 FGF13Q92913 245 aa18.63■□□□□ 0.57
HMGN3-203ENST00000620514 MFSD1Q9H3U5 465 aa18.63■□□□□ 0.57
HMGN3-203ENST00000620514 CYP4F11Q9HBI6 524 aa18.63■□□□□ 0.57
HMGN3-203ENST00000620514 FBXL21Q9UKT6 434 aa18.63■□□□□ 0.57
HMGN3-203ENST00000620514 WDFY4Q6ZS81 3184 aa18.62■□□□□ 0.57
HMGN3-203ENST00000620514 FRMD3A2A2Y4 597 aa18.62■□□□□ 0.57
HMGN3-203ENST00000620514 SPTLC1O15269 473 aa18.62■□□□□ 0.57
HMGN3-203ENST00000620514 PPP6R2O75170 966 aa18.62■□□□□ 0.57
HMGN3-203ENST00000620514 YEATS4O95619 227 aa18.62■□□□□ 0.57
HMGN3-203ENST00000620514 HSP90AA1P07900 732 aaKnown RBP18.62■□□□□ 0.57
HMGN3-203ENST00000620514 RHOP08100 348 aa18.62■□□□□ 0.57
HMGN3-203ENST00000620514 OR4Q2P0C623 313 aa18.62■□□□□ 0.57
HMGN3-203ENST00000620514 ZSCAN22P10073 491 aaPredicted RBP18.62■□□□□ 0.57
HMGN3-203ENST00000620514 NPR3P17342 541 aa18.62■□□□□ 0.57
HMGN3-203ENST00000620514 ADCY1Q08828 1119 aa18.62■□□□□ 0.57
HMGN3-203ENST00000620514 PKP1Q13835 747 aa18.62■□□□□ 0.57
HMGN3-203ENST00000620514 TMEM132DQ14C87 1099 aa18.62■□□□□ 0.57
HMGN3-203ENST00000620514 SLC5A9Q2M3M2 681 aa18.62■□□□□ 0.57
HMGN3-203ENST00000620514 C9orf57Q5W0N0 161 aa18.62■□□□□ 0.57
HMGN3-203ENST00000620514 CWF19L1Q69YN2 538 aaKnown RBP18.62■□□□□ 0.57
HMGN3-203ENST00000620514 TCEAL8Q8IYN2 117 aa18.62■□□□□ 0.57
HMGN3-203ENST00000620514 SIX5Q8N196 739 aa18.62■□□□□ 0.57
HMGN3-203ENST00000620514 ZSWIM2Q8NEG5 633 aa18.62■□□□□ 0.57
HMGN3-203ENST00000620514 FGF14Q92915 247 aa18.62■□□□□ 0.57
HMGN3-203ENST00000620514 NXPE3Q969Y0 559 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms