RNA–Protein interactions for RNA: ENST00000618939.4

CNOT3-210, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-210ENST00000618939 SMG5Q9UPR3 1016 aaKnown RBP14.69□□□□□ -0.06
CNOT3-210ENST00000618939 GTF2H1P32780 548 aa14.69□□□□□ -0.06
CNOT3-210ENST00000618939 PSMD6Q15008 389 aa14.69□□□□□ -0.06
CNOT3-210ENST00000618939 Q3C1V9 767 aa14.69□□□□□ -0.06
CNOT3-210ENST00000618939 TRPM8Q7Z2W7 1104 aa14.69□□□□□ -0.06
CNOT3-210ENST00000618939 CRLF3Q8IUI8 442 aa14.69□□□□□ -0.06
CNOT3-210ENST00000618939 SPC25Q9HBM1 224 aa14.69□□□□□ -0.06
CNOT3-210ENST00000618939 WDR35Q9P2L0 1181 aa14.69□□□□□ -0.06
CNOT3-210ENST00000618939 PPARGC1AQ9UBK2 798 aaKnown RBP14.69□□□□□ -0.06
CNOT3-210ENST00000618939 MAGED2Q9UNF1 606 aaPredicted RBP14.69□□□□□ -0.06
CNOT3-210ENST00000618939 FAM47DPA6NHR8 397 aa14.68□□□□□ -0.06
CNOT3-210ENST00000618939 CCT8L1PA6NM43 557 aa14.68□□□□□ -0.06
CNOT3-210ENST00000618939 MAPTP10636 758 aaKnown RBP14.68□□□□□ -0.06
CNOT3-210ENST00000618939 GARTP22102 1010 aa14.68□□□□□ -0.06
CNOT3-210ENST00000618939 RRM1P23921 792 aa14.68□□□□□ -0.06
CNOT3-210ENST00000618939 ASPHQ12797 758 aa14.68□□□□□ -0.06
CNOT3-210ENST00000618939 FOXR1Q6PIV2 292 aa14.68□□□□□ -0.06
CNOT3-210ENST00000618939 TTC39CQ8N584 583 aa14.68□□□□□ -0.06
CNOT3-210ENST00000618939 DHX38Q92620 1227 aaKnown RBP14.68□□□□□ -0.06
CNOT3-210ENST00000618939 GBP5Q96PP8 586 aa14.68□□□□□ -0.06
CNOT3-210ENST00000618939 ASTN1O14525 1302 aa14.68□□□□□ -0.06
CNOT3-210ENST00000618939 H0Y3Z8 333 aa14.68□□□□□ -0.06
CNOT3-210ENST00000618939 GYG2O15488 501 aa14.68□□□□□ -0.06
CNOT3-210ENST00000618939 LPXNO60711 386 aa14.68□□□□□ -0.06
CNOT3-210ENST00000618939 HAUS5O94927 633 aa14.68□□□□□ -0.06
CNOT3-210ENST00000618939 CRY2Q49AN0 593 aa14.68□□□□□ -0.06
CNOT3-210ENST00000618939 C4orf33Q8N1A6 199 aa14.68□□□□□ -0.06
CNOT3-210ENST00000618939 C3orf20Q8ND61 904 aa14.68□□□□□ -0.06
CNOT3-210ENST00000618939 RBM46Q8TBY0 533 aaKnown RBP14.68□□□□□ -0.06
CNOT3-210ENST00000618939 NIF3L1Q9GZT8 377 aa14.68□□□□□ -0.06
CNOT3-210ENST00000618939 SMYD2Q9NRG4 433 aa14.68□□□□□ -0.06
CNOT3-210ENST00000618939 ZNF263O14978 683 aa14.68□□□□□ -0.06
CNOT3-210ENST00000618939 ZC3H11AO75152 810 aaKnown RBP eCLIP14.68□□□□□ -0.06
CNOT3-210ENST00000618939 SNHG28P0DPA3 235 aa14.68□□□□□ -0.06
CNOT3-210ENST00000618939 GPAT2Q6NUI2 795 aa14.68□□□□□ -0.06
CNOT3-210ENST00000618939 ARHGEF19Q8IW93 802 aa14.68□□□□□ -0.06
CNOT3-210ENST00000618939 ARHGEF26Q96DR7 871 aa14.68□□□□□ -0.06
CNOT3-210ENST00000618939 SERPINB12Q96P63 405 aa14.68□□□□□ -0.06
CNOT3-210ENST00000618939 OATP04181 439 aa14.67□□□□□ -0.06
CNOT3-210ENST00000618939 WEE2P0C1S8 567 aa14.67□□□□□ -0.06
CNOT3-210ENST00000618939 SERPINB6P35237 376 aa14.67□□□□□ -0.06
CNOT3-210ENST00000618939 GABPAQ06546 454 aa14.67□□□□□ -0.06
CNOT3-210ENST00000618939 HYIQ5T013 277 aa14.67□□□□□ -0.06
CNOT3-210ENST00000618939 TMC3Q7Z5M5 1100 aa14.67□□□□□ -0.06
CNOT3-210ENST00000618939 ETNPPLQ8TBG4 499 aa14.67□□□□□ -0.06
CNOT3-210ENST00000618939 ADAMTS3O15072 1205 aa14.67□□□□□ -0.06
CNOT3-210ENST00000618939 DPEP1P16444 411 aa14.67□□□□□ -0.06
CNOT3-210ENST00000618939 ARFIP2P53365 341 aa14.67□□□□□ -0.06
CNOT3-210ENST00000618939 NFX1Q12986 1120 aaKnown RBP14.67□□□□□ -0.06
CNOT3-210ENST00000618939 C1orf228Q6PIY5 440 aa14.67□□□□□ -0.06
CNOT3-210ENST00000618939 SAMD7Q7Z3H4 446 aa14.67□□□□□ -0.06
CNOT3-210ENST00000618939 LRRC34Q8IZ02 419 aa14.67□□□□□ -0.06
CNOT3-210ENST00000618939 CYTH2Q99418 400 aa14.67□□□□□ -0.06
CNOT3-210ENST00000618939 PNMA3Q9UL41 463 aa14.67□□□□□ -0.06
CNOT3-210ENST00000618939 CYP24A1Q07973 514 aa14.67□□□□□ -0.06
CNOT3-210ENST00000618939 ZNF844Q08AG5 666 aa14.67□□□□□ -0.06
CNOT3-210ENST00000618939 GOLGA8RI6L899 631 aa14.67□□□□□ -0.06
CNOT3-210ENST00000618939 PPP1R11O60927 126 aaPredicted RBP14.67□□□□□ -0.06
CNOT3-210ENST00000618939 PSMD10O75832 226 aa14.67□□□□□ -0.06
CNOT3-210ENST00000618939 ITKQ08881 620 aa14.67□□□□□ -0.06
CNOT3-210ENST00000618939 ANGEL2Q5VTE6 544 aaKnown RBP14.67□□□□□ -0.06
CNOT3-210ENST00000618939 WDR75Q8IWA0 830 aaKnown RBP14.67□□□□□ -0.06
CNOT3-210ENST00000618939 TTYH3Q9C0H2 523 aa14.67□□□□□ -0.06
CNOT3-210ENST00000618939 NACA2Q9H009 215 aa14.67□□□□□ -0.06
CNOT3-210ENST00000618939 TLK1Q9UKI8 766 aa14.67□□□□□ -0.06
CNOT3-210ENST00000618939 KIF13AQ9H1H9 1805 aa14.66□□□□□ -0.06
CNOT3-210ENST00000618939 SPATA31C1P0DKV0 1188 aa14.66□□□□□ -0.06
CNOT3-210ENST00000618939 FECHP22830 423 aa14.66□□□□□ -0.06
CNOT3-210ENST00000618939 TNFRSF8P28908 595 aa14.66□□□□□ -0.06
CNOT3-210ENST00000618939 KCNV1Q6PIU1 500 aa14.66□□□□□ -0.06
CNOT3-210ENST00000618939 BTNL9Q6UXG8 535 aa14.66□□□□□ -0.06
CNOT3-210ENST00000618939 SAMD3Q8N6K7 520 aa14.66□□□□□ -0.06
CNOT3-210ENST00000618939 CCDC97Q96F63 343 aaPredicted RBP14.66□□□□□ -0.06
CNOT3-210ENST00000618939 SEMA4AQ9H3S1 761 aa14.66□□□□□ -0.06
CNOT3-210ENST00000618939 LRRC4BQ9NT99 713 aa14.66□□□□□ -0.06
CNOT3-210ENST00000618939 TXNP10599 105 aaKnown RBP14.66□□□□□ -0.06
CNOT3-210ENST00000618939 BRD2P25440 801 aaKnown RBP14.66□□□□□ -0.06
CNOT3-210ENST00000618939 GMPSP49915 693 aaPredicted RBP14.66□□□□□ -0.06
CNOT3-210ENST00000618939 C1orf131Q8NDD1 294 aaKnown RBP14.66□□□□□ -0.06
CNOT3-210ENST00000618939 BEST2Q8NFU1 509 aa14.66□□□□□ -0.06
CNOT3-210ENST00000618939 MMP19Q99542 508 aa14.66□□□□□ -0.06
CNOT3-210ENST00000618939 MRIQ9BWK5 157 aa14.66□□□□□ -0.06
CNOT3-210ENST00000618939 FGFBP2Q9BYJ0 223 aa14.66□□□□□ -0.06
CNOT3-210ENST00000618939 CDC42EP4Q9H3Q1 356 aaKnown RBP14.66□□□□□ -0.06
CNOT3-210ENST00000618939 PSMC3IPQ9P2W1 217 aaPredicted RBP14.66□□□□□ -0.06
CNOT3-210ENST00000618939 PCDHAC2Q9Y5I4 1007 aa14.66□□□□□ -0.06
CNOT3-210ENST00000618939 PSTPIP1O43586 416 aa14.66□□□□□ -0.06
CNOT3-210ENST00000618939 CST8O60676 142 aa14.66□□□□□ -0.06
CNOT3-210ENST00000618939 SRGAP2BP0DMP2 458 aa14.66□□□□□ -0.06
CNOT3-210ENST00000618939 PEX19P40855 299 aa14.66□□□□□ -0.06
CNOT3-210ENST00000618939 FKBP1AP62942 108 aaKnown RBP14.66□□□□□ -0.06
CNOT3-210ENST00000618939 SKOR1P84550 965 aa14.66□□□□□ -0.06
CNOT3-210ENST00000618939 SEZ6Q53EL9 994 aa14.66□□□□□ -0.06
CNOT3-210ENST00000618939 EIF1ADQ8N9N8 165 aaKnown RBP14.66□□□□□ -0.06
CNOT3-210ENST00000618939 INPP4AQ96PE3 977 aaPredicted RBP14.66□□□□□ -0.06
CNOT3-210ENST00000618939 AP5M1Q9H0R1 490 aa14.66□□□□□ -0.06
CNOT3-210ENST00000618939 DHX35Q9H5Z1 703 aaKnown RBP14.66□□□□□ -0.06
CNOT3-210ENST00000618939 PXMP2Q9NR77 195 aa14.66□□□□□ -0.06
CNOT3-210ENST00000618939 WHRNQ9P202 907 aa14.66□□□□□ -0.06
CNOT3-210ENST00000618939 AGAP1Q9UPQ3 857 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms