RNA–Protein interactions for RNA: ENST00000618934.1

PCDHGB3-202, Transcript of protocadherin gamma subfamily B, 3, humanhuman

APPRIS P1 BASIC

Gene PCDHGB3, Length 2,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-202ENST00000618934 NOMO3P69849 1222 aa20.5■□□□□ 0.87
PCDHGB3-202ENST00000618934 CUL2Q13617 745 aa20.5■□□□□ 0.87
PCDHGB3-202ENST00000618934 SUPT20HL1Q3ZLR7 823 aa20.5■□□□□ 0.87
PCDHGB3-202ENST00000618934 MFSD5Q6N075 450 aa20.5■□□□□ 0.87
PCDHGB3-202ENST00000618934 TRMT10CQ7L0Y3 403 aaKnown RBP20.5■□□□□ 0.87
PCDHGB3-202ENST00000618934 WRNIP1Q96S55 665 aa20.5■□□□□ 0.87
PCDHGB3-202ENST00000618934 SLC40A1Q9NP59 571 aa20.5■□□□□ 0.87
PCDHGB3-202ENST00000618934 MLXIPLQ9NP71 852 aa20.5■□□□□ 0.87
PCDHGB3-202ENST00000618934 ADAMTS5Q9UNA0 930 aa20.5■□□□□ 0.87
PCDHGB3-202ENST00000618934 STYXL1Q9Y6J8 313 aa20.5■□□□□ 0.87
PCDHGB3-202ENST00000618934 LCTP09848 1927 aa20.5■□□□□ 0.87
PCDHGB3-202ENST00000618934 FDX1P10109 184 aa20.49■□□□□ 0.87
PCDHGB3-202ENST00000618934 ITIH2P19823 946 aa20.49■□□□□ 0.87
PCDHGB3-202ENST00000618934 SCTRP47872 440 aa20.49■□□□□ 0.87
PCDHGB3-202ENST00000618934 GMPSP49915 693 aaPredicted RBP20.49■□□□□ 0.87
PCDHGB3-202ENST00000618934 CDR1P51861 262 aa20.49■□□□□ 0.87
PCDHGB3-202ENST00000618934 PTP4A2Q12974 167 aa20.49■□□□□ 0.87
PCDHGB3-202ENST00000618934 XKR3Q5GH77 459 aa20.49■□□□□ 0.87
PCDHGB3-202ENST00000618934 PIGWQ7Z7B1 504 aa20.49■□□□□ 0.87
PCDHGB3-202ENST00000618934 SCYL3Q8IZE3 742 aa20.49■□□□□ 0.87
PCDHGB3-202ENST00000618934 ELAC2Q9BQ52 826 aaKnown RBP20.49■□□□□ 0.87
PCDHGB3-202ENST00000618934 PLVAPQ9BX97 442 aa20.49■□□□□ 0.87
PCDHGB3-202ENST00000618934 RBAKQ9NYW8 714 aaPredicted RBP20.49■□□□□ 0.87
PCDHGB3-202ENST00000618934 ADAM22Q9P0K1 906 aa20.49■□□□□ 0.87
PCDHGB3-202ENST00000618934 FBXO40Q9UH90 709 aa20.49■□□□□ 0.87
PCDHGB3-202ENST00000618934 NFASCO94856 1347 aa20.49■□□□□ 0.87
PCDHGB3-202ENST00000618934 RASSF9O75901 435 aa20.49■□□□□ 0.87
PCDHGB3-202ENST00000618934 CETPP11597 493 aa20.49■□□□□ 0.87
PCDHGB3-202ENST00000618934 ADCY8P40145 1251 aa20.49■□□□□ 0.87
PCDHGB3-202ENST00000618934 CNTN2Q02246 1040 aa20.49■□□□□ 0.87
PCDHGB3-202ENST00000618934 ZNF677Q86XU0 584 aa20.49■□□□□ 0.87
PCDHGB3-202ENST00000618934 ABRAQ8N0Z2 381 aa20.49■□□□□ 0.87
PCDHGB3-202ENST00000618934 CYP4X1Q8N118 509 aa20.49■□□□□ 0.87
PCDHGB3-202ENST00000618934 HARSP12081 509 aaKnown RBP20.48■□□□□ 0.87
PCDHGB3-202ENST00000618934 GNA15P30679 374 aa20.48■□□□□ 0.87
PCDHGB3-202ENST00000618934 SLC1A1P43005 524 aa20.48■□□□□ 0.87
PCDHGB3-202ENST00000618934 RPL7AP62424 266 aaKnown RBP20.48■□□□□ 0.87
PCDHGB3-202ENST00000618934 MPP2Q14168 576 aa20.48■□□□□ 0.87
PCDHGB3-202ENST00000618934 DOCK1Q14185 1865 aa20.48■□□□□ 0.87
PCDHGB3-202ENST00000618934 PI4K2BG5E9Z4 385 aa20.48■□□□□ 0.87
PCDHGB3-202ENST00000618934 NFKBIEO00221 500 aa20.48■□□□□ 0.87
PCDHGB3-202ENST00000618934 TTC4O95801 387 aa20.48■□□□□ 0.87
PCDHGB3-202ENST00000618934 VIMP08670 466 aaKnown RBP20.48■□□□□ 0.87
PCDHGB3-202ENST00000618934 MYBL1P10243 752 aa20.48■□□□□ 0.87
PCDHGB3-202ENST00000618934 SSR1P43307 286 aaKnown RBP20.48■□□□□ 0.87
PCDHGB3-202ENST00000618934 GTF2A1P52655 376 aaPredicted RBP20.48■□□□□ 0.87
PCDHGB3-202ENST00000618934 STRN3Q13033 797 aa20.48■□□□□ 0.87
PCDHGB3-202ENST00000618934 DRP2Q13474 957 aa20.48■□□□□ 0.87
PCDHGB3-202ENST00000618934 VSTM1Q6UX27 236 aa20.48■□□□□ 0.87
PCDHGB3-202ENST00000618934 ARMC9Q7Z3E5 817 aa20.48■□□□□ 0.87
PCDHGB3-202ENST00000618934 GLIS1Q8NBF1 620 aa20.48■□□□□ 0.87
PCDHGB3-202ENST00000618934 CCDC197Q8NCU1 140 aa20.48■□□□□ 0.87
PCDHGB3-202ENST00000618934 ATL2Q8NHH9 583 aa20.48■□□□□ 0.87
PCDHGB3-202ENST00000618934 ARHGEF2Q92974 986 aaKnown RBP20.48■□□□□ 0.87
PCDHGB3-202ENST00000618934 HAUS2Q9NVX0 235 aa20.48■□□□□ 0.87
PCDHGB3-202ENST00000618934 NINJ2Q9NZG7 142 aa20.48■□□□□ 0.87
PCDHGB3-202ENST00000618934 ANAPC5Q9UJX4 755 aa20.48■□□□□ 0.87
PCDHGB3-202ENST00000618934 K7ERI5 159 aa20.47■□□□□ 0.87
PCDHGB3-202ENST00000618934 MIS18BP1Q6P0N0 1132 aa20.47■□□□□ 0.87
PCDHGB3-202ENST00000618934 SEPT14Q6ZU15 432 aa20.47■□□□□ 0.87
PCDHGB3-202ENST00000618934 RBBP8NLQ8NC74 664 aaPredicted RBP20.47■□□□□ 0.87
PCDHGB3-202ENST00000618934 CEP89Q96ST8 783 aa20.47■□□□□ 0.87
PCDHGB3-202ENST00000618934 ROPN1BQ9BZX4 212 aaPredicted RBP20.47■□□□□ 0.87
PCDHGB3-202ENST00000618934 PORCNQ9H237 461 aa20.47■□□□□ 0.87
PCDHGB3-202ENST00000618934 ROPN1Q9HAT0 212 aaPredicted RBP20.47■□□□□ 0.87
PCDHGB3-202ENST00000618934 GINM1Q9NU53 330 aa20.47■□□□□ 0.87
PCDHGB3-202ENST00000618934 GJA3Q9Y6H8 435 aa20.47■□□□□ 0.87
PCDHGB3-202ENST00000618934 CNTNAP2Q9UHC6 1331 aa20.47■□□□□ 0.87
PCDHGB3-202ENST00000618934 DKC1O60832 514 aaKnown RBP eCLIP20.47■□□□□ 0.87
PCDHGB3-202ENST00000618934 CST3P01034 146 aaPredicted RBP20.47■□□□□ 0.87
PCDHGB3-202ENST00000618934 KRT10P13645 584 aa20.47■□□□□ 0.87
PCDHGB3-202ENST00000618934 ATF2P15336 505 aa20.47■□□□□ 0.87
PCDHGB3-202ENST00000618934 LACTB2Q53H82 288 aaPredicted RBP20.47■□□□□ 0.87
PCDHGB3-202ENST00000618934 FAM81BQ96LP2 452 aa20.47■□□□□ 0.87
PCDHGB3-202ENST00000618934 MSTO1Q9BUK6 570 aa20.47■□□□□ 0.87
PCDHGB3-202ENST00000618934 OSBPL8Q9BZF1 889 aa20.47■□□□□ 0.87
PCDHGB3-202ENST00000618934 DHX33Q9H6R0 707 aaKnown RBP20.47■□□□□ 0.87
PCDHGB3-202ENST00000618934 KIAA1586Q9HCI6 787 aa20.47■□□□□ 0.87
PCDHGB3-202ENST00000618934 PIM2Q9P1W9 311 aa20.47■□□□□ 0.87
PCDHGB3-202ENST00000618934 MAFBQ9Y5Q3 323 aaPredicted RBP20.47■□□□□ 0.87
PCDHGB3-202ENST00000618934 TMEM120BA0PK00 339 aa20.46■□□□□ 0.87
PCDHGB3-202ENST00000618934 CCT8L1PA6NM43 557 aa20.46■□□□□ 0.87
PCDHGB3-202ENST00000618934 ASAP2O43150 1006 aa20.46■□□□□ 0.87
PCDHGB3-202ENST00000618934 THAP12O43422 761 aa20.46■□□□□ 0.87
PCDHGB3-202ENST00000618934 CLTAP09496 248 aa20.46■□□□□ 0.87
PCDHGB3-202ENST00000618934 BPIFB4P59827 614 aa20.46■□□□□ 0.87
PCDHGB3-202ENST00000618934 ENPEPQ07075 957 aa20.46■□□□□ 0.87
PCDHGB3-202ENST00000618934 SCLT1Q96NL6 688 aa20.46■□□□□ 0.87
PCDHGB3-202ENST00000618934 CCDC134Q9H6E4 229 aa20.46■□□□□ 0.87
PCDHGB3-202ENST00000618934 ZNF302Q9NR11 478 aa20.46■□□□□ 0.87
PCDHGB3-202ENST00000618934 KLC4Q9NSK0 619 aa20.46■□□□□ 0.87
PCDHGB3-202ENST00000618934 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.46■□□□□ 0.87
PCDHGB3-202ENST00000618934 A0A0B4J269 797 aa20.46■□□□□ 0.87
PCDHGB3-202ENST00000618934 TLR3O15455 904 aaKnown RBP20.46■□□□□ 0.87
PCDHGB3-202ENST00000618934 GH1P01241 217 aa20.46■□□□□ 0.87
PCDHGB3-202ENST00000618934 ARL2P36404 184 aa20.46■□□□□ 0.87
PCDHGB3-202ENST00000618934 TNFSF9P41273 254 aa20.46■□□□□ 0.87
PCDHGB3-202ENST00000618934 NOP14P78316 857 aaKnown RBP20.46■□□□□ 0.87
PCDHGB3-202ENST00000618934 PLCB4Q15147 1175 aa20.46■□□□□ 0.87
PCDHGB3-202ENST00000618934 PLEKHA7Q6IQ23 1121 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms