RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 TRPA1O75762 1119 aa18.75■□□□□ 0.59
CNOT3-209ENST00000617930 ALDH1A1P00352 501 aa18.75■□□□□ 0.59
CNOT3-209ENST00000617930 UNGP13051 313 aaPredicted RBP18.75■□□□□ 0.59
CNOT3-209ENST00000617930 ITGA4P13612 1032 aa18.75■□□□□ 0.59
CNOT3-209ENST00000617930 FCGRTP55899 365 aa18.75■□□□□ 0.59
CNOT3-209ENST00000617930 BEX3Q00994 111 aa18.75■□□□□ 0.59
CNOT3-209ENST00000617930 AMHR2Q16671 573 aa18.75■□□□□ 0.59
CNOT3-209ENST00000617930 MARCH8Q5T0T0 291 aa18.75■□□□□ 0.59
CNOT3-209ENST00000617930 SYCE1Q8N0S2 351 aa18.75■□□□□ 0.59
CNOT3-209ENST00000617930 KRT12Q99456 494 aa18.75■□□□□ 0.59
CNOT3-209ENST00000617930 INO80BQ9C086 356 aaPredicted RBP18.75■□□□□ 0.59
CNOT3-209ENST00000617930 MTMR12Q9C0I1 747 aa18.75■□□□□ 0.59
CNOT3-209ENST00000617930 TUT1Q9H6E5 874 aaKnown RBP18.75■□□□□ 0.59
CNOT3-209ENST00000617930 FAM204AQ9H8W3 233 aa18.75■□□□□ 0.59
CNOT3-209ENST00000617930 CTTNBP2NLQ9P2B4 639 aa18.75■□□□□ 0.59
CNOT3-209ENST00000617930 AMFRQ9UKV5 643 aa18.75■□□□□ 0.59
CNOT3-209ENST00000617930 CYP1A2P05177 515 aa18.74■□□□□ 0.59
CNOT3-209ENST00000617930 MARCKSL1P49006 195 aa18.74■□□□□ 0.59
CNOT3-209ENST00000617930 OSTNP61366 133 aa18.74■□□□□ 0.59
CNOT3-209ENST00000617930 NCOA4Q13772 614 aa18.74■□□□□ 0.59
CNOT3-209ENST00000617930 CLEC16AQ2KHT3 1053 aa18.74■□□□□ 0.59
CNOT3-209ENST00000617930 WDR44Q5JSH3 913 aa18.74■□□□□ 0.59
CNOT3-209ENST00000617930 ATF7IP2Q5U623 682 aa18.74■□□□□ 0.59
CNOT3-209ENST00000617930 LLGL2Q6P1M3 1020 aa18.74■□□□□ 0.59
CNOT3-209ENST00000617930 RHOT2Q8IXI1 618 aa18.74■□□□□ 0.59
CNOT3-209ENST00000617930 EFCAB13Q8IY85 973 aa18.74■□□□□ 0.59
CNOT3-209ENST00000617930 EXOC8Q8IYI6 725 aa18.74■□□□□ 0.59
CNOT3-209ENST00000617930 THNSL1Q8IYQ7 743 aa18.74■□□□□ 0.59
CNOT3-209ENST00000617930 SELENOOQ9BVL4 669 aa18.74■□□□□ 0.59
CNOT3-209ENST00000617930 AP1M1Q9BXS5 423 aa18.74■□□□□ 0.59
CNOT3-209ENST00000617930 A0A087WZ62 844 aa18.74■□□□□ 0.59
CNOT3-209ENST00000617930 GPR25O00155 361 aa18.74■□□□□ 0.59
CNOT3-209ENST00000617930 CLTAP09496 248 aa18.74■□□□□ 0.59
CNOT3-209ENST00000617930 CYBAP13498 195 aa18.74■□□□□ 0.59
CNOT3-209ENST00000617930 SSTR3P32745 418 aaPredicted RBP18.74■□□□□ 0.59
CNOT3-209ENST00000617930 NOP14P78316 857 aaKnown RBP18.74■□□□□ 0.59
CNOT3-209ENST00000617930 C2CD6Q53TS8 623 aa18.74■□□□□ 0.59
CNOT3-209ENST00000617930 ZNF484Q5JVG2 852 aa18.74■□□□□ 0.59
CNOT3-209ENST00000617930 ACAD10Q6JQN1 1059 aa18.74■□□□□ 0.59
CNOT3-209ENST00000617930 AADACL2Q6P093 401 aa18.74■□□□□ 0.59
CNOT3-209ENST00000617930 MPZL3Q6UWV2 235 aa18.74■□□□□ 0.59
CNOT3-209ENST00000617930 UBR7Q8N806 425 aa18.74■□□□□ 0.59
CNOT3-209ENST00000617930 KRT35Q92764 455 aa18.74■□□□□ 0.59
CNOT3-209ENST00000617930 FAM212AQ96EL1 285 aa18.74■□□□□ 0.59
CNOT3-209ENST00000617930 FDXACB1Q9BRP7 624 aaPredicted RBP18.74■□□□□ 0.59
CNOT3-209ENST00000617930 C2orf40Q9H1Z8 148 aa18.74■□□□□ 0.59
CNOT3-209ENST00000617930 NOC2LQ9Y3T9 749 aaKnown RBP18.74■□□□□ 0.59
CNOT3-209ENST00000617930 MTA2O94776 668 aa18.73■□□□□ 0.59
CNOT3-209ENST00000617930 VTNP04004 478 aa18.73■□□□□ 0.59
CNOT3-209ENST00000617930 IVLP07476 585 aa18.73■□□□□ 0.59
CNOT3-209ENST00000617930 MYL6P60660 151 aa18.73■□□□□ 0.59
CNOT3-209ENST00000617930 IRF5Q13568 498 aa18.73■□□□□ 0.59
CNOT3-209ENST00000617930 WDR49Q8IV35 697 aa18.73■□□□□ 0.59
CNOT3-209ENST00000617930 AENQ8WTP8 325 aaKnown RBP18.73■□□□□ 0.59
CNOT3-209ENST00000617930 RUBCNQ92622 972 aa18.73■□□□□ 0.59
CNOT3-209ENST00000617930 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.73■□□□□ 0.592e-15■■■□□ 17.1
CNOT3-209ENST00000617930 CDT1Q9H211 546 aa18.73■□□□□ 0.59
CNOT3-209ENST00000617930 STIM2Q9P246 746 aa18.73■□□□□ 0.59
CNOT3-209ENST00000617930 CNTN6Q9UQ52 1028 aa18.73■□□□□ 0.59
CNOT3-209ENST00000617930 SYF2O95926 243 aaKnown RBP18.73■□□□□ 0.59
CNOT3-209ENST00000617930 ASS1P00966 412 aaKnown RBP18.73■□□□□ 0.59
CNOT3-209ENST00000617930 DGKDQ16760 1214 aa18.73■□□□□ 0.59
CNOT3-209ENST00000617930 C8orf74Q6P047 294 aa18.73■□□□□ 0.59
CNOT3-209ENST00000617930 CPA5Q8WXQ8 436 aa18.73■□□□□ 0.59
CNOT3-209ENST00000617930 JPH2Q9BR39 696 aaPredicted RBP18.73■□□□□ 0.59
CNOT3-209ENST00000617930 TRIM7Q9C029 511 aa18.73■□□□□ 0.59
CNOT3-209ENST00000617930 PCDHB2Q9Y5E7 798 aa18.73■□□□□ 0.59
CNOT3-209ENST00000617930 ESYT3A0FGR9 886 aa18.72■□□□□ 0.59
CNOT3-209ENST00000617930 RAD51CO43502 376 aa18.72■□□□□ 0.59
CNOT3-209ENST00000617930 SP3Q02447 781 aa18.72■□□□□ 0.59
CNOT3-209ENST00000617930 ZNF211Q13398 564 aaPredicted RBP18.72■□□□□ 0.59
CNOT3-209ENST00000617930 ZNF568Q3ZCX4 644 aa18.72■□□□□ 0.59
CNOT3-209ENST00000617930 C11orf63Q6NUN7 778 aa18.72■□□□□ 0.59
CNOT3-209ENST00000617930 MTHFD1LQ6UB35 978 aa18.72■□□□□ 0.59
CNOT3-209ENST00000617930 TMEM270Q6UE05 265 aa18.72■□□□□ 0.59
CNOT3-209ENST00000617930 KLHL7Q8IXQ5 586 aa18.72■□□□□ 0.59
CNOT3-209ENST00000617930 CD99L2Q8TCZ2 262 aa18.72■□□□□ 0.59
CNOT3-209ENST00000617930 CYFIP2Q96F07 1278 aa18.72■□□□□ 0.59
CNOT3-209ENST00000617930 NUP85Q9BW27 656 aa18.72■□□□□ 0.59
CNOT3-209ENST00000617930 NFKBIZQ9BYH8 718 aa18.72■□□□□ 0.59
CNOT3-209ENST00000617930 CASP8AP2Q9UKL3 1982 aa18.72■□□□□ 0.59
CNOT3-209ENST00000617930 F2P00734 622 aa18.71■□□□□ 0.59
CNOT3-209ENST00000617930 CYP1A1P04798 512 aaPredicted RBP18.71■□□□□ 0.59
CNOT3-209ENST00000617930 ELNP15502 786 aa18.71■□□□□ 0.59
CNOT3-209ENST00000617930 COMTP21964 271 aa18.71■□□□□ 0.59
CNOT3-209ENST00000617930 TFDP1Q14186 410 aa18.71■□□□□ 0.59
CNOT3-209ENST00000617930 PHLDB2Q86SQ0 1253 aa18.71■□□□□ 0.59
CNOT3-209ENST00000617930 CD101Q93033 1021 aa18.71■□□□□ 0.59
CNOT3-209ENST00000617930 ZNF653Q96CK0 615 aa18.71■□□□□ 0.59
CNOT3-209ENST00000617930 ZSWIM1Q9BR11 485 aa18.71■□□□□ 0.59
CNOT3-209ENST00000617930 CFHR5Q9BXR6 569 aa18.71■□□□□ 0.59
CNOT3-209ENST00000617930 GDF3Q9NR23 364 aa18.71■□□□□ 0.59
CNOT3-209ENST00000617930 GTF3C4Q9UKN8 822 aa18.71■□□□□ 0.59
CNOT3-209ENST00000617930 TNFSF13BQ9Y275 285 aa18.71■□□□□ 0.59
CNOT3-209ENST00000617930 PCDHB4Q9Y5E5 795 aa18.71■□□□□ 0.59
CNOT3-209ENST00000617930 TRIP12Q14669 1992 aaPredicted RBP18.71■□□□□ 0.59
CNOT3-209ENST00000617930 THSD7BQ9C0I4 1608 aa18.71■□□□□ 0.59
CNOT3-209ENST00000617930 TMEM110-MUSTN1A8MSY1 372 aa18.71■□□□□ 0.59
CNOT3-209ENST00000617930 PGRMC1O00264 195 aaKnown RBP18.71■□□□□ 0.59
CNOT3-209ENST00000617930 ASAP2O43150 1006 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms