RNA–Protein interactions for RNA: ENST00000617270.4

RFX3-212, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFX3, Length 9,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-212ENST00000617270 RNPC3Q96LT9 517 aaKnown RBP6.29□□□□□ -1.4
RFX3-212ENST00000617270 WNT8AQ9H1J5 351 aa6.29□□□□□ -1.4
RFX3-212ENST00000617270 STON1Q9Y6Q2 735 aa6.29□□□□□ -1.4
RFX3-212ENST00000617270 NESP48681 1621 aa6.29□□□□□ -1.4
RFX3-212ENST00000617270 LOC100653049A0A140TA62 436 aa6.29□□□□□ -1.4
RFX3-212ENST00000617270 KRT34O76011 436 aa6.29□□□□□ -1.4
RFX3-212ENST00000617270 COX10Q12887 443 aa6.29□□□□□ -1.4
RFX3-212ENST00000617270 DDX39BQ13838 428 aaKnown RBP6.29□□□□□ -1.4
RFX3-212ENST00000617270 CYFIP1Q7L576 1253 aa6.29□□□□□ -1.4
RFX3-212ENST00000617270 RBM15Q96T37 977 aaKnown RBP eCLIP6.29□□□□□ -1.4
RFX3-212ENST00000617270 FAM118BQ9BPY3 351 aa6.29□□□□□ -1.4
RFX3-212ENST00000617270 SPATA16Q9BXB7 569 aa6.29□□□□□ -1.4
RFX3-212ENST00000617270 KIAA1586Q9HCI6 787 aa6.29□□□□□ -1.4
RFX3-212ENST00000617270 BLMP54132 1417 aaPredicted RBP6.29□□□□□ -1.4
RFX3-212ENST00000617270 PRAG1Q86YV5 1406 aa6.29□□□□□ -1.4
RFX3-212ENST00000617270 POTEIP0CG38 1075 aa6.29□□□□□ -1.4
RFX3-212ENST00000617270 PSMA4P25789 261 aaKnown RBP6.29□□□□□ -1.4
RFX3-212ENST00000617270 IRX1P78414 480 aaPredicted RBP6.29□□□□□ -1.4
RFX3-212ENST00000617270 PTK7Q13308 1070 aa6.29□□□□□ -1.4
RFX3-212ENST00000617270 PTRHD1Q6GMV3 140 aaKnown RBP6.29□□□□□ -1.4
RFX3-212ENST00000617270 POTEGQ6S5H5 508 aa6.29□□□□□ -1.4
RFX3-212ENST00000617270 SH2D3CQ8N5H7 860 aa6.29□□□□□ -1.4
RFX3-212ENST00000617270 CLEC4MQ9H2X3 399 aaPredicted RBP6.29□□□□□ -1.4
RFX3-212ENST00000617270 PI4KBQ9UBF8 816 aa6.29□□□□□ -1.4
RFX3-212ENST00000617270 IQCA1LA6NCM1 817 aa6.29□□□□□ -1.4
RFX3-212ENST00000617270 TK2O00142 265 aa6.29□□□□□ -1.4
RFX3-212ENST00000617270 ALDH1A2O94788 518 aa6.29□□□□□ -1.4
RFX3-212ENST00000617270 PARNO95453 639 aaKnown RBP6.29□□□□□ -1.4
RFX3-212ENST00000617270 GH2P01242 217 aa6.29□□□□□ -1.4
RFX3-212ENST00000617270 STAT3P40763 770 aa6.29□□□□□ -1.4
RFX3-212ENST00000617270 DMPKQ09013 629 aa6.29□□□□□ -1.4
RFX3-212ENST00000617270 AP3B2Q13367 1082 aa6.29□□□□□ -1.4
RFX3-212ENST00000617270 CNGA2Q16280 664 aa6.29□□□□□ -1.4
RFX3-212ENST00000617270 DAB2IPQ5VWQ8 1189 aa6.29□□□□□ -1.4
RFX3-212ENST00000617270 FAM45BPQ6NSW5 357 aa6.29□□□□□ -1.4
RFX3-212ENST00000617270 SPATA2LQ8IUW3 424 aaPredicted RBP6.29□□□□□ -1.4
RFX3-212ENST00000617270 SPATA33Q96N06 139 aa6.29□□□□□ -1.4
RFX3-212ENST00000617270 RAVER2Q9HCJ3 691 aaKnown RBP6.29□□□□□ -1.4
RFX3-212ENST00000617270 KRCC1Q9NPI7 259 aaPredicted RBP6.29□□□□□ -1.4
RFX3-212ENST00000617270 PSMC3IPQ9P2W1 217 aaPredicted RBP6.29□□□□□ -1.4
RFX3-212ENST00000617270 UVRAGQ9P2Y5 699 aa6.29□□□□□ -1.4
RFX3-212ENST00000617270 SLC30A1Q9Y6M5 507 aa6.29□□□□□ -1.4
RFX3-212ENST00000617270 MYO3BQ8WXR4 1341 aa6.29□□□□□ -1.4
RFX3-212ENST00000617270 E9PBE3 544 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 ATP1A1P05023 1023 aaKnown RBP6.28□□□□□ -1.4
RFX3-212ENST00000617270 CHI3L1P36222 383 aaPredicted RBP6.28□□□□□ -1.4
RFX3-212ENST00000617270 ERFEQ4G0M1 354 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 ARL6IP4Q66PJ3 421 aaKnown RBP6.28□□□□□ -1.4
RFX3-212ENST00000617270 GPR141Q7Z602 305 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 UNC5CLQ8IV45 518 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 AGGF1Q8N302 714 aaeCLIP6.28□□□□□ -1.4
RFX3-212ENST00000617270 KIF24Q5T7B8 1368 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 EVPLLA8MZ36 301 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 SNPHO15079 494 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 DSG1Q02413 1049 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 RESP18Q5W5W9 173 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 OOSP2Q86WS3 158 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 COMMD2Q86X83 199 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 TSEN34Q9BSV6 310 aaKnown RBP6.28□□□□□ -1.4
RFX3-212ENST00000617270 REXO4Q9GZR2 422 aaKnown RBP6.28□□□□□ -1.4
RFX3-212ENST00000617270 PARVAQ9NVD7 372 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 GALNT8Q9NY28 637 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 GABBR1Q9UBS5 961 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 LSM7Q9UK45 103 aaKnown RBP6.28□□□□□ -1.4
RFX3-212ENST00000617270 PCDHB8Q9UN66 801 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 CHMP2BQ9UQN3 213 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 ZBTB39O15060 712 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 CDK8P49336 464 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 POU4F1Q01851 419 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 STAT4Q14765 748 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 GALNTL6Q49A17 601 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 PRUNE1Q86TP1 453 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 SGF29Q96ES7 293 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 THUMPD3Q9BV44 507 aaKnown RBP6.28□□□□□ -1.4
RFX3-212ENST00000617270 CPVLQ9H3G5 476 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 RBAKQ9NYW8 714 aaPredicted RBP6.28□□□□□ -1.4
RFX3-212ENST00000617270 RPS6KB2Q9UBS0 482 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 SMG5Q9UPR3 1016 aaKnown RBP6.28□□□□□ -1.4
RFX3-212ENST00000617270 ZMYM4Q5VZL5 1548 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 B2RBV5 119 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 ALDH1A1P00352 501 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 GSTM1P09488 218 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 ATP6V1C1P21283 382 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 PTPN7P35236 360 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 NCKAP1LP55160 1127 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 ARF5P84085 180 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 MTFR1Q15390 333 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 CYP51A1Q16850 503 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 SCARA3Q6AZY7 606 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 NLGN1Q8N2Q7 840 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 EXD1Q8NHP7 514 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 CMTM5Q96DZ9 223 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 ZNF560Q96MR9 790 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 PNKPQ96T60 521 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 DDX50Q9BQ39 737 aaKnown RBP6.28□□□□□ -1.4
RFX3-212ENST00000617270 EIF2AK4Q9P2K8 1649 aaKnown RBP6.28□□□□□ -1.4
RFX3-212ENST00000617270 FAM187AA6NFU0 413 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 NCF1BA6NI72 391 aaPredicted RBP6.28□□□□□ -1.4
RFX3-212ENST00000617270 SNTNA6NMZ2 147 aa6.28□□□□□ -1.4
RFX3-212ENST00000617270 LRRIQ3A6PVS8 624 aaPredicted RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms