RNA–Protein interactions for RNA: ENST00000616944.4

CBWD1-225, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-225ENST00000616944 KAT5Q92993 513 aa16.33■□□□□ 0.2
CBWD1-225ENST00000616944 STK33Q9BYT3 514 aa16.33■□□□□ 0.2
CBWD1-225ENST00000616944 UBE2TQ9NPD8 197 aaPredicted RBP16.33■□□□□ 0.2
CBWD1-225ENST00000616944 MIOSQ9NXC5 875 aa16.33■□□□□ 0.2
CBWD1-225ENST00000616944 NUB1Q9Y5A7 615 aa16.33■□□□□ 0.2
CBWD1-225ENST00000616944 CEP290O15078 2479 aa16.33■□□□□ 0.2
CBWD1-225ENST00000616944 F8VZ95 297 aa16.32■□□□□ 0.2
CBWD1-225ENST00000616944 XPOTO43592 962 aaKnown RBP16.32■□□□□ 0.2
CBWD1-225ENST00000616944 OFD1O75665 1012 aa16.32■□□□□ 0.2
CBWD1-225ENST00000616944 STAU1O95793 577 aaKnown RBP16.32■□□□□ 0.2
CBWD1-225ENST00000616944 CSF2RAP15509 400 aa16.32■□□□□ 0.2
CBWD1-225ENST00000616944 POLR2BP30876 1174 aaKnown RBP16.32■□□□□ 0.2
CBWD1-225ENST00000616944 SCNN1GP51170 649 aa16.32■□□□□ 0.2
CBWD1-225ENST00000616944 TRPC3Q13507 836 aa16.32■□□□□ 0.2
CBWD1-225ENST00000616944 WDR44Q5JSH3 913 aa16.32■□□□□ 0.2
CBWD1-225ENST00000616944 CLLU1OSQ5K130 101 aa16.32■□□□□ 0.2
CBWD1-225ENST00000616944 PPM1KQ8N3J5 372 aa16.32■□□□□ 0.2
CBWD1-225ENST00000616944 RNF169Q8NCN4 708 aa16.32■□□□□ 0.2
CBWD1-225ENST00000616944 ZNF397Q8NF99 534 aaPredicted RBP16.32■□□□□ 0.2
CBWD1-225ENST00000616944 BEST2Q8NFU1 509 aa16.32■□□□□ 0.2
CBWD1-225ENST00000616944 TAF4BQ92750 862 aa16.32■□□□□ 0.2
CBWD1-225ENST00000616944 SYN2Q92777 582 aaPredicted RBP16.32■□□□□ 0.2
CBWD1-225ENST00000616944 RPS6KC1Q96S38 1066 aa16.32■□□□□ 0.2
CBWD1-225ENST00000616944 IMPG2Q9BZV3 1241 aa16.32■□□□□ 0.2
CBWD1-225ENST00000616944 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.32■□□□□ 0.2
CBWD1-225ENST00000616944 TSC2P49815 1807 aa16.32■□□□□ 0.2
CBWD1-225ENST00000616944 PIRO00625 290 aa16.31■□□□□ 0.2
CBWD1-225ENST00000616944 PPEF2O14830 753 aa16.31■□□□□ 0.2
CBWD1-225ENST00000616944 THP07101 528 aa16.31■□□□□ 0.2
CBWD1-225ENST00000616944 LRPAP1P30533 357 aa16.31■□□□□ 0.2
CBWD1-225ENST00000616944 ATICP31939 592 aa16.31■□□□□ 0.2
CBWD1-225ENST00000616944 RAPGEF1Q13905 1077 aa16.31■□□□□ 0.2
CBWD1-225ENST00000616944 ZNF699Q32M78 642 aa16.31■□□□□ 0.2
CBWD1-225ENST00000616944 C9orf57Q5W0N0 161 aa16.31■□□□□ 0.2
CBWD1-225ENST00000616944 SHC3Q92529 594 aa16.31■□□□□ 0.2
CBWD1-225ENST00000616944 ZNF830Q96NB3 372 aaPredicted RBP16.31■□□□□ 0.2
CBWD1-225ENST00000616944 ARID3AQ99856 593 aa16.31■□□□□ 0.2
CBWD1-225ENST00000616944 NUCKS1Q9H1E3 243 aaKnown RBP16.31■□□□□ 0.2
CBWD1-225ENST00000616944 GOLGA2P5Q9HBQ8 144 aa16.31■□□□□ 0.2
CBWD1-225ENST00000616944 SLC38A7Q9NVC3 462 aa16.31■□□□□ 0.2
CBWD1-225ENST00000616944 AIPL1Q9NZN9 384 aa16.31■□□□□ 0.2
CBWD1-225ENST00000616944 PCDH10Q9P2E7 1040 aa16.31■□□□□ 0.2
CBWD1-225ENST00000616944 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.31■□□□□ 0.2
CBWD1-225ENST00000616944 KRT19P08727 400 aa16.3■□□□□ 0.2
CBWD1-225ENST00000616944 RBP5P82980 135 aa16.3■□□□□ 0.2
CBWD1-225ENST00000616944 GRIK3Q13003 919 aa16.3■□□□□ 0.2
CBWD1-225ENST00000616944 DRAP1Q14919 205 aaPredicted RBP16.3■□□□□ 0.2
CBWD1-225ENST00000616944 ENOSF1Q7L5Y1 443 aa16.3■□□□□ 0.2
CBWD1-225ENST00000616944 TMEM199Q8N511 208 aa16.3■□□□□ 0.2
CBWD1-225ENST00000616944 LRRC52Q8N7C0 313 aa16.3■□□□□ 0.2
CBWD1-225ENST00000616944 CCDC112Q8NEF3 446 aa16.3■□□□□ 0.2
CBWD1-225ENST00000616944 FAXDC2Q96IV6 333 aa16.3■□□□□ 0.2
CBWD1-225ENST00000616944 FAM81BQ96LP2 452 aa16.3■□□□□ 0.2
CBWD1-225ENST00000616944 SPAG5Q96R06 1193 aa16.3■□□□□ 0.2
CBWD1-225ENST00000616944 NIF3L1Q9GZT8 377 aa16.3■□□□□ 0.2
CBWD1-225ENST00000616944 AGAP1Q9UPQ3 857 aa16.3■□□□□ 0.2
CBWD1-225ENST00000616944 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.3■□□□□ 0.2
CBWD1-225ENST00000616944 PDE4DIPQ5VU43 2346 aa16.3■□□□□ 0.2
CBWD1-225ENST00000616944 PFKMP08237 780 aa16.3■□□□□ 0.2
CBWD1-225ENST00000616944 ASPAP45381 313 aa16.3■□□□□ 0.2
CBWD1-225ENST00000616944 MFAP3P55082 362 aa16.3■□□□□ 0.2
CBWD1-225ENST00000616944 CDK17Q00537 523 aa16.3■□□□□ 0.2
CBWD1-225ENST00000616944 CUL2Q13617 745 aa16.3■□□□□ 0.2
CBWD1-225ENST00000616944 IKBKEQ14164 716 aa16.3■□□□□ 0.2
CBWD1-225ENST00000616944 HGSNATQ68CP4 663 aa16.3■□□□□ 0.2
CBWD1-225ENST00000616944 UBR7Q8N806 425 aa16.3■□□□□ 0.2
CBWD1-225ENST00000616944 JAKMIP2Q96AA8 810 aa16.3■□□□□ 0.2
CBWD1-225ENST00000616944 HPDLQ96IR7 371 aa16.3■□□□□ 0.2
CBWD1-225ENST00000616944 BAG1Q99933 345 aaPredicted RBP16.3■□□□□ 0.2
CBWD1-225ENST00000616944 BCO2Q9BYV7 579 aa16.3■□□□□ 0.2
CBWD1-225ENST00000616944 POMCP01189 267 aa16.29■□□□□ 0.2
CBWD1-225ENST00000616944 PNMA6AP0CW24 399 aaPredicted RBP16.29■□□□□ 0.2
CBWD1-225ENST00000616944 FGFR1P11362 822 aa16.29■□□□□ 0.2
CBWD1-225ENST00000616944 ACO1P21399 889 aaKnown RBP16.29■□□□□ 0.2
CBWD1-225ENST00000616944 TBXAS1P24557 533 aaPredicted RBP16.29■□□□□ 0.2
CBWD1-225ENST00000616944 SOX5P35711 763 aa16.29■□□□□ 0.2
CBWD1-225ENST00000616944 ARHGAP44Q17R89 818 aa16.29■□□□□ 0.2
CBWD1-225ENST00000616944 SFMBT2Q5VUG0 894 aa16.29■□□□□ 0.2
CBWD1-225ENST00000616944 GLB1LQ6UWU2 654 aa16.29■□□□□ 0.2
CBWD1-225ENST00000616944 IRF2BP2Q7Z5L9 587 aa16.29■□□□□ 0.2
CBWD1-225ENST00000616944 ABHD14A-ACY1A0A1B0GW23 586 aa16.28■□□□□ 0.2
CBWD1-225ENST00000616944 FOXN3O00409 490 aaPredicted RBP16.28■□□□□ 0.2
CBWD1-225ENST00000616944 IBSPP21815 317 aaPredicted RBP16.28■□□□□ 0.2
CBWD1-225ENST00000616944 PRKCIP41743 596 aa16.28■□□□□ 0.2
CBWD1-225ENST00000616944 DSC1Q08554 894 aa16.28■□□□□ 0.2
CBWD1-225ENST00000616944 WDR72Q3MJ13 1102 aa16.28■□□□□ 0.2
CBWD1-225ENST00000616944 ZNF667Q5HYK9 610 aa16.28■□□□□ 0.2
CBWD1-225ENST00000616944 SMYD5Q6GMV2 418 aa16.28■□□□□ 0.2
CBWD1-225ENST00000616944 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.28■□□□□ 0.2
CBWD1-225ENST00000616944 NPAS4Q8IUM7 802 aa16.28■□□□□ 0.2
CBWD1-225ENST00000616944 FAM71AQ8IYT1 594 aa16.28■□□□□ 0.2
CBWD1-225ENST00000616944 C7orf61Q8IZ16 206 aa16.28■□□□□ 0.2
CBWD1-225ENST00000616944 RPUSD2Q8IZ73 545 aaKnown RBP16.28■□□□□ 0.2
CBWD1-225ENST00000616944 TRIM44Q96DX7 344 aaPredicted RBP16.28■□□□□ 0.2
CBWD1-225ENST00000616944 CHP1Q99653 195 aa16.28■□□□□ 0.2
CBWD1-225ENST00000616944 IL23AQ9NPF7 189 aa16.28■□□□□ 0.2
CBWD1-225ENST00000616944 ARHGAP20Q9P2F6 1191 aa16.28■□□□□ 0.2
CBWD1-225ENST00000616944 CNTN6Q9UQ52 1028 aa16.28■□□□□ 0.2
CBWD1-225ENST00000616944 PCDHB7Q9Y5E2 793 aa16.28■□□□□ 0.2
CBWD1-225ENST00000616944 KIAA1671Q9BY89 1806 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms