RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 SLC44A4Q53GD3 710 aa20.68■□□□□ 0.9
CDX1-202ENST00000616154 ZPBP2Q6X784 338 aa20.68■□□□□ 0.9
CDX1-202ENST00000616154 TCEAL8Q8IYN2 117 aa20.68■□□□□ 0.9
CDX1-202ENST00000616154 SUSD3Q96L08 255 aa20.68■□□□□ 0.9
CDX1-202ENST00000616154 ANKFY1Q9P2R3 1169 aa20.68■□□□□ 0.9
CDX1-202ENST00000616154 OTOGLQ3ZCN5 2332 aa20.68■□□□□ 0.9
CDX1-202ENST00000616154 PRRG1O14668 218 aa20.67■□□□□ 0.9
CDX1-202ENST00000616154 LMNAP02545 664 aaKnown RBP20.67■□□□□ 0.9
CDX1-202ENST00000616154 PLA2G4BP0C869 781 aa20.67■□□□□ 0.9
CDX1-202ENST00000616154 SP9P0CG40 484 aa20.67■□□□□ 0.9
CDX1-202ENST00000616154 DDIT3P35638 169 aa20.67■□□□□ 0.9
CDX1-202ENST00000616154 UBA7P41226 1012 aa20.67■□□□□ 0.9
CDX1-202ENST00000616154 SMTNP53814 917 aa20.67■□□□□ 0.9
CDX1-202ENST00000616154 GRIN1Q05586 938 aa20.67■□□□□ 0.9
CDX1-202ENST00000616154 RAD51AP2Q09MP3 1159 aa20.67■□□□□ 0.9
CDX1-202ENST00000616154 SLC10A6Q3KNW5 377 aa20.67■□□□□ 0.9
CDX1-202ENST00000616154 TPGS2Q68CL5 300 aa20.67■□□□□ 0.9
CDX1-202ENST00000616154 ZC3H14Q6PJT7 736 aaKnown RBP20.67■□□□□ 0.9
CDX1-202ENST00000616154 LRRC15Q8TF66 581 aa20.67■□□□□ 0.9
CDX1-202ENST00000616154 OSBPL6Q9BZF3 934 aa20.67■□□□□ 0.9
CDX1-202ENST00000616154 CCSER1Q9C0I3 900 aa20.67■□□□□ 0.9
CDX1-202ENST00000616154 ZSCAN16Q9H4T2 348 aaPredicted RBP20.67■□□□□ 0.9
CDX1-202ENST00000616154 FBXL5Q9UKA1 691 aa20.67■□□□□ 0.9
CDX1-202ENST00000616154 R4GN57 208 aa20.67■□□□□ 0.9
CDX1-202ENST00000616154 STX6O43752 255 aa20.66■□□□□ 0.9
CDX1-202ENST00000616154 LRRN2O75325 713 aa20.66■□□□□ 0.9
CDX1-202ENST00000616154 CEBPBP17676 345 aa20.66■□□□□ 0.9
CDX1-202ENST00000616154 MCL1Q07820 350 aa20.66■□□□□ 0.9
CDX1-202ENST00000616154 PRSS36Q5K4E3 855 aa20.66■□□□□ 0.9
CDX1-202ENST00000616154 ZNF280DQ6N043 979 aa20.66■□□□□ 0.9
CDX1-202ENST00000616154 MCRS1Q96EZ8 462 aa20.66■□□□□ 0.9
CDX1-202ENST00000616154 CDK5RAP3Q96JB5 506 aa20.66■□□□□ 0.9
CDX1-202ENST00000616154 CYP4F11Q9HBI6 524 aa20.66■□□□□ 0.9
CDX1-202ENST00000616154 BLOC1S4Q9NUP1 217 aa20.66■□□□□ 0.9
CDX1-202ENST00000616154 INSL5Q9Y5Q6 135 aa20.66■□□□□ 0.9
CDX1-202ENST00000616154 CLIC4Q9Y696 253 aa20.66■□□□□ 0.9
CDX1-202ENST00000616154 DCHS1Q96JQ0 3298 aa20.65■□□□□ 0.9
CDX1-202ENST00000616154 MICAL2O94851 1124 aa20.65■□□□□ 0.9
CDX1-202ENST00000616154 SEC24AO95486 1093 aa20.65■□□□□ 0.9
CDX1-202ENST00000616154 MCM4P33991 863 aa20.65■□□□□ 0.9
CDX1-202ENST00000616154 ARPP19P56211 112 aa20.65■□□□□ 0.9
CDX1-202ENST00000616154 CTXN3Q4LDR2 81 aa20.65■□□□□ 0.9
CDX1-202ENST00000616154 ARSHQ5FYA8 562 aa20.65■□□□□ 0.9
CDX1-202ENST00000616154 POTEHQ6S545 545 aa20.65■□□□□ 0.9
CDX1-202ENST00000616154 APPL2Q8NEU8 664 aa20.65■□□□□ 0.9
CDX1-202ENST00000616154 KCNG4Q8TDN1 519 aa20.65■□□□□ 0.9
CDX1-202ENST00000616154 DDX12PQ92771 950 aa20.65■□□□□ 0.9
CDX1-202ENST00000616154 CALML4Q96GE6 196 aa20.65■□□□□ 0.9
CDX1-202ENST00000616154 BCO2Q9BYV7 579 aa20.65■□□□□ 0.9
CDX1-202ENST00000616154 TUBGCP4Q9UGJ1 667 aa20.65■□□□□ 0.9
CDX1-202ENST00000616154 FBXO2Q9UK22 296 aaPredicted RBP20.65■□□□□ 0.9
CDX1-202ENST00000616154 ODF2LQ9ULJ1 636 aa20.65■□□□□ 0.9
CDX1-202ENST00000616154 MAFFQ9ULX9 164 aa20.65■□□□□ 0.9
CDX1-202ENST00000616154 PCDHB8Q9UN66 801 aa20.65■□□□□ 0.9
CDX1-202ENST00000616154 SRPRBQ9Y5M8 271 aaKnown RBP20.65■□□□□ 0.9
CDX1-202ENST00000616154 H0YCG3 227 aa20.64■□□□□ 0.89
CDX1-202ENST00000616154 CLDN3O15551 220 aa20.64■□□□□ 0.89
CDX1-202ENST00000616154 HSP90AA1P07900 732 aaKnown RBP20.64■□□□□ 0.89
CDX1-202ENST00000616154 PDIA4P13667 645 aaKnown RBP20.64■□□□□ 0.89
CDX1-202ENST00000616154 MAGEA9P43362 315 aa20.64■□□□□ 0.89
CDX1-202ENST00000616154 FOXK2Q01167 660 aa20.64■□□□□ 0.89
CDX1-202ENST00000616154 UBXN2BQ14CS0 331 aa20.64■□□□□ 0.89
CDX1-202ENST00000616154 SEZ6Q53EL9 994 aa20.64■□□□□ 0.89
CDX1-202ENST00000616154 MAML2Q8IZL2 1156 aaPredicted RBP20.64■□□□□ 0.89
CDX1-202ENST00000616154 ELSPBP1Q96BH3 223 aa20.64■□□□□ 0.89
CDX1-202ENST00000616154 PLIN2Q99541 437 aa20.64■□□□□ 0.89
CDX1-202ENST00000616154 CORO1BQ9BR76 489 aa20.64■□□□□ 0.89
CDX1-202ENST00000616154 PLA2G2FQ9BZM2 168 aa20.64■□□□□ 0.89
CDX1-202ENST00000616154 PLEKHA5Q9HAU0 1116 aa20.64■□□□□ 0.89
CDX1-202ENST00000616154 LTB4R2Q9NPC1 389 aa20.64■□□□□ 0.89
CDX1-202ENST00000616154 LARSQ9P2J5 1176 aaKnown RBP20.64■□□□□ 0.89
CDX1-202ENST00000616154 AFF4Q9UHB7 1163 aaKnown RBP20.64■□□□□ 0.89
CDX1-202ENST00000616154 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.64■□□□□ 0.89
CDX1-202ENST00000616154 CACNA1AO00555 2505 aa20.63■□□□□ 0.89
CDX1-202ENST00000616154 ZNF197O14709 1029 aa20.63■□□□□ 0.89
CDX1-202ENST00000616154 CXCL8P10145 99 aa20.63■□□□□ 0.89
CDX1-202ENST00000616154 PLCG1P19174 1290 aa20.63■□□□□ 0.89
CDX1-202ENST00000616154 FCARP24071 287 aa20.63■□□□□ 0.89
CDX1-202ENST00000616154 LRPAP1P30533 357 aa20.63■□□□□ 0.89
CDX1-202ENST00000616154 ZNF131P52739 623 aa20.63■□□□□ 0.89
CDX1-202ENST00000616154 NCKAP1LP55160 1127 aa20.63■□□□□ 0.89
CDX1-202ENST00000616154 FAM173BQ6P4H8 233 aa20.63■□□□□ 0.89
CDX1-202ENST00000616154 HAPLN2Q9GZV7 340 aa20.63■□□□□ 0.89
CDX1-202ENST00000616154 MTF2Q9Y483 593 aaPredicted RBP20.63■□□□□ 0.89
CDX1-202ENST00000616154 F5P12259 2224 aa20.63■□□□□ 0.89
CDX1-202ENST00000616154 COL4A2P08572 1712 aa20.63■□□□□ 0.89
CDX1-202ENST00000616154 NPHP3-ACAD11A0A0J9YXS1 232 aa20.62■□□□□ 0.89
CDX1-202ENST00000616154 TTC26A0AVF1 554 aa20.62■□□□□ 0.89
CDX1-202ENST00000616154 FAM170BA6NMN3 283 aa20.62■□□□□ 0.89
CDX1-202ENST00000616154 CLTAP09496 248 aa20.62■□□□□ 0.89
CDX1-202ENST00000616154 SCP2P22307 547 aa20.62■□□□□ 0.89
CDX1-202ENST00000616154 NASPP49321 788 aaPredicted RBP20.62■□□□□ 0.89
CDX1-202ENST00000616154 ADCY1Q08828 1119 aa20.62■□□□□ 0.89
CDX1-202ENST00000616154 SLC39A14Q15043 492 aa20.62■□□□□ 0.89
CDX1-202ENST00000616154 KARSQ15046 597 aaKnown RBP20.62■□□□□ 0.89
CDX1-202ENST00000616154 ZNF528Q3MIS6 628 aa20.62■□□□□ 0.89
CDX1-202ENST00000616154 TANGO2Q6ICL3 276 aa20.62■□□□□ 0.89
CDX1-202ENST00000616154 PDZD4Q76G19 769 aaPredicted RBP20.62■□□□□ 0.89
CDX1-202ENST00000616154 ELMOD1Q8N336 334 aa20.62■□□□□ 0.89
CDX1-202ENST00000616154 RAD54LQ92698 747 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms