RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 RASGEF1AQ8N9B8 481 aa13.24□□□□□ -0.29
TCF4-248ENST00000616053 PIGSQ96S52 555 aa13.24□□□□□ -0.29
TCF4-248ENST00000616053 MAP2K2P36507 400 aa13.24□□□□□ -0.29
TCF4-248ENST00000616053 CNGA2Q16280 664 aa13.24□□□□□ -0.29
TCF4-248ENST00000616053 TRPM2O94759 1503 aa13.24□□□□□ -0.29
TCF4-248ENST00000616053 UQCRBP14927 111 aa13.24□□□□□ -0.29
TCF4-248ENST00000616053 KCNA6P17658 529 aa13.24□□□□□ -0.29
TCF4-248ENST00000616053 THPOP40225 353 aa13.24□□□□□ -0.29
TCF4-248ENST00000616053 AP2B1P63010 937 aa13.24□□□□□ -0.29
TCF4-248ENST00000616053 SRSF11Q05519 484 aaKnown RBP13.24□□□□□ -0.29
TCF4-248ENST00000616053 INPP5AQ14642 412 aa13.24□□□□□ -0.29
TCF4-248ENST00000616053 FAM45BPQ6NSW5 357 aa13.24□□□□□ -0.29
TCF4-248ENST00000616053 PPM1NQ8N819 430 aa13.24□□□□□ -0.29
TCF4-248ENST00000616053 ORAI2Q96SN7 254 aa13.24□□□□□ -0.29
TCF4-248ENST00000616053 EYA1Q99502 592 aa13.24□□□□□ -0.29
TCF4-248ENST00000616053 SLC13A1Q9BZW2 595 aa13.24□□□□□ -0.29
TCF4-248ENST00000616053 WWOXQ9NZC7 414 aa13.24□□□□□ -0.29
TCF4-248ENST00000616053 STOML1Q9UBI4 398 aa13.24□□□□□ -0.29
TCF4-248ENST00000616053 PSMD3O43242 534 aa13.23□□□□□ -0.29
TCF4-248ENST00000616053 IGSF3O75054 1194 aa13.23□□□□□ -0.29
TCF4-248ENST00000616053 TDP2O95551 362 aa13.23□□□□□ -0.29
TCF4-248ENST00000616053 RRM2P31350 389 aa13.23□□□□□ -0.29
TCF4-248ENST00000616053 RHAGQ02094 409 aa13.23□□□□□ -0.29
TCF4-248ENST00000616053 PTH1RQ03431 593 aa13.23□□□□□ -0.29
TCF4-248ENST00000616053 BTKQ06187 659 aa13.23□□□□□ -0.29
TCF4-248ENST00000616053 ECDO95905 644 aaPredicted RBP13.23□□□□□ -0.29
TCF4-248ENST00000616053 KLC1Q07866 573 aa13.23□□□□□ -0.29
TCF4-248ENST00000616053 UBE2SQ16763 222 aa13.23□□□□□ -0.29
TCF4-248ENST00000616053 ATP13A4Q4VNC1 1196 aa13.23□□□□□ -0.29
TCF4-248ENST00000616053 CACUL1Q86Y37 369 aa13.23□□□□□ -0.29
TCF4-248ENST00000616053 HSPBP1Q9NZL4 362 aa13.23□□□□□ -0.29
TCF4-248ENST00000616053 PCDHA4Q9UN74 947 aa13.23□□□□□ -0.29
TCF4-248ENST00000616053 USP17L15C9J2P7 530 aa13.23□□□□□ -0.29
TCF4-248ENST00000616053 USP17L13C9JLJ4 530 aa13.23□□□□□ -0.29
TCF4-248ENST00000616053 USP17L11C9JVI0 530 aa13.23□□□□□ -0.29
TCF4-248ENST00000616053 USP17L18D6R9N7 530 aa13.23□□□□□ -0.29
TCF4-248ENST00000616053 USP17L22D6RA61 530 aa13.23□□□□□ -0.29
TCF4-248ENST00000616053 USP17L17D6RBQ6 530 aa13.23□□□□□ -0.29
TCF4-248ENST00000616053 USP17L19D6RCP7 530 aa13.23□□□□□ -0.29
TCF4-248ENST00000616053 USP17L20D6RJB6 530 aa13.23□□□□□ -0.29
TCF4-248ENST00000616053 E7EWF7 191 aa13.23□□□□□ -0.29
TCF4-248ENST00000616053 AP3B1O00203 1094 aa13.23□□□□□ -0.29
TCF4-248ENST00000616053 PGRMC1O00264 195 aaKnown RBP13.23□□□□□ -0.29
TCF4-248ENST00000616053 HOXA2O43364 376 aa13.23□□□□□ -0.29
TCF4-248ENST00000616053 ACSL3O95573 720 aa13.23□□□□□ -0.29
TCF4-248ENST00000616053 COPB1P53618 953 aaKnown RBP13.23□□□□□ -0.29
TCF4-248ENST00000616053 NPEPPSP55786 919 aa13.23□□□□□ -0.29
TCF4-248ENST00000616053 USP17L24Q0WX57 530 aa13.23□□□□□ -0.29
TCF4-248ENST00000616053 AP1ARQ63HQ0 302 aa13.23□□□□□ -0.29
TCF4-248ENST00000616053 ABCB11O95342 1321 aa13.23□□□□□ -0.29
TCF4-248ENST00000616053 SCGNO76038 276 aa13.23□□□□□ -0.29
TCF4-248ENST00000616053 TBXAS1P24557 533 aaPredicted RBP13.23□□□□□ -0.29
TCF4-248ENST00000616053 RWDD2BP57060 319 aa13.23□□□□□ -0.29
TCF4-248ENST00000616053 CARNMT1Q8N4J0 409 aa13.23□□□□□ -0.29
TCF4-248ENST00000616053 USP6NLQ92738 828 aa13.23□□□□□ -0.29
TCF4-248ENST00000616053 AGAP3Q96P47 875 aa13.23□□□□□ -0.29
TCF4-248ENST00000616053 NAGPAQ9UK23 515 aa13.23□□□□□ -0.29
TCF4-248ENST00000616053 FGRP09769 529 aa13.23□□□□□ -0.29
TCF4-248ENST00000616053 PCNAP12004 261 aa13.23□□□□□ -0.29
TCF4-248ENST00000616053 OAS2P29728 719 aaKnown RBP13.23□□□□□ -0.29
TCF4-248ENST00000616053 HALP42357 657 aa13.23□□□□□ -0.29
TCF4-248ENST00000616053 C1orf146Q5VVC0 180 aa13.23□□□□□ -0.29
TCF4-248ENST00000616053 FBXO42Q6P3S6 717 aa13.23□□□□□ -0.29
TCF4-248ENST00000616053 ELOVL2Q9NXB9 296 aa13.23□□□□□ -0.29
TCF4-248ENST00000616053 PCDHGA3Q9Y5H0 932 aa13.23□□□□□ -0.29
TCF4-248ENST00000616053 FGFR2P21802 821 aa13.23□□□□□ -0.29
TCF4-248ENST00000616053 SOX6P35712 828 aa13.23□□□□□ -0.29
TCF4-248ENST00000616053 IZUMO3Q5VZ72 239 aa13.23□□□□□ -0.29
TCF4-248ENST00000616053 TRAF7Q6Q0C0 670 aa13.23□□□□□ -0.29
TCF4-248ENST00000616053 TSPAN14Q8NG11 270 aa13.23□□□□□ -0.29
TCF4-248ENST00000616053 RUBCNQ92622 972 aa13.23□□□□□ -0.29
TCF4-248ENST00000616053 CLIP3Q96DZ5 547 aa13.23□□□□□ -0.29
TCF4-248ENST00000616053 H3BUI4 141 aa13.23□□□□□ -0.29
TCF4-248ENST00000616053 CCDC149Q6ZUS6 474 aa13.23□□□□□ -0.29
TCF4-248ENST00000616053 SLC25A41Q8N5S1 370 aa13.23□□□□□ -0.29
TCF4-248ENST00000616053 HTATIP2Q9BUP3 242 aa13.23□□□□□ -0.29
TCF4-248ENST00000616053 OGFRQ9NZT2 677 aa13.23□□□□□ -0.29
TCF4-248ENST00000616053 ALG6Q9Y672 507 aa13.23□□□□□ -0.29
TCF4-248ENST00000616053 RIMS2Q9UQ26 1411 aa13.22□□□□□ -0.29
TCF4-248ENST00000616053 APOL1O14791 398 aa13.22□□□□□ -0.29
TCF4-248ENST00000616053 GYG2O15488 501 aa13.22□□□□□ -0.29
TCF4-248ENST00000616053 ACTR2P61160 394 aa13.22□□□□□ -0.29
TCF4-248ENST00000616053 KIF23Q02241 960 aaPredicted RBP13.22□□□□□ -0.29
TCF4-248ENST00000616053 STX4Q12846 297 aa13.22□□□□□ -0.29
TCF4-248ENST00000616053 ZNF248Q8NDW4 579 aa13.22□□□□□ -0.29
TCF4-248ENST00000616053 COA1Q9GZY4 146 aa13.22□□□□□ -0.29
TCF4-248ENST00000616053 POLR3FQ9H1D9 316 aaPredicted RBP13.22□□□□□ -0.29
TCF4-248ENST00000616053 CATSPERBQ9H7T0 1116 aa13.22□□□□□ -0.29
TCF4-248ENST00000616053 KANSL1LA0AUZ9 987 aa13.22□□□□□ -0.29
TCF4-248ENST00000616053 CCT8P50990 548 aa13.22□□□□□ -0.29
TCF4-248ENST00000616053 ARHGDIBP52566 201 aa13.22□□□□□ -0.29
TCF4-248ENST00000616053 WDR36Q8NI36 951 aaKnown RBP13.22□□□□□ -0.29
TCF4-248ENST00000616053 FANCEQ9HB96 536 aa13.22□□□□□ -0.29
TCF4-248ENST00000616053 CTNNAL1Q9UBT7 734 aa13.22□□□□□ -0.29
TCF4-248ENST00000616053 CSTF3Q12996 717 aaKnown RBP13.22□□□□□ -0.29
TCF4-248ENST00000616053 LMBRD2Q68DH5 695 aaPredicted RBP13.22□□□□□ -0.29
TCF4-248ENST00000616053 UGT3A1Q6NUS8 523 aa13.22□□□□□ -0.29
TCF4-248ENST00000616053 AASDHPPTQ9NRN7 309 aa13.22□□□□□ -0.29
TCF4-248ENST00000616053 GABBR1Q9UBS5 961 aa13.22□□□□□ -0.29
TCF4-248ENST00000616053 SFI1A8K8P3 1242 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 254.6 ms