RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 CCDC160A6NGH7 325 aa13.95□□□□□ -0.18
MSH6-214ENST00000616033 SMAPO00193 183 aa13.95□□□□□ -0.18
MSH6-214ENST00000616033 TXNDC9O14530 226 aa13.95□□□□□ -0.18
MSH6-214ENST00000616033 MEIS2O14770 477 aa13.95□□□□□ -0.18
MSH6-214ENST00000616033 GAS7O60861 476 aa13.95□□□□□ -0.18
MSH6-214ENST00000616033 USP1O94782 785 aa13.95□□□□□ -0.18
MSH6-214ENST00000616033 FGFR1P11362 822 aa13.95□□□□□ -0.18
MSH6-214ENST00000616033 SERPINB3P29508 390 aa13.95□□□□□ -0.18
MSH6-214ENST00000616033 ABCD1P33897 745 aa13.95□□□□□ -0.18
MSH6-214ENST00000616033 NEK3P51956 506 aa13.95□□□□□ -0.18
MSH6-214ENST00000616033 GPSM2P81274 684 aa13.95□□□□□ -0.18
MSH6-214ENST00000616033 ICA1Q05084 483 aa13.95□□□□□ -0.18
MSH6-214ENST00000616033 GPS1Q13098 491 aa13.95□□□□□ -0.18
MSH6-214ENST00000616033 RASA3Q14644 834 aa13.95□□□□□ -0.18
MSH6-214ENST00000616033 DOK7Q18PE1 504 aa13.95□□□□□ -0.18
MSH6-214ENST00000616033 ACSBG2Q5FVE4 666 aa13.95□□□□□ -0.18
MSH6-214ENST00000616033 SPDYCQ5MJ68 293 aa13.95□□□□□ -0.18
MSH6-214ENST00000616033 TMEM63BQ5T3F8 832 aa13.95□□□□□ -0.18
MSH6-214ENST00000616033 ZFPM1Q8IX07 1006 aa13.95□□□□□ -0.18
MSH6-214ENST00000616033 TEX9Q8N6V9 391 aa13.95□□□□□ -0.18
MSH6-214ENST00000616033 RBBP8NLQ8NC74 664 aaPredicted RBP13.95□□□□□ -0.18
MSH6-214ENST00000616033 EPS8L1Q8TE68 723 aa13.95□□□□□ -0.18
MSH6-214ENST00000616033 MIPEPQ99797 713 aa13.95□□□□□ -0.18
MSH6-214ENST00000616033 LRMDAQ9H2I8 198 aa13.95□□□□□ -0.18
MSH6-214ENST00000616033 PCNTO95613 3336 aa13.94□□□□□ -0.18
MSH6-214ENST00000616033 TP73O15350 636 aa13.94□□□□□ -0.18
MSH6-214ENST00000616033 FESP07332 822 aa13.94□□□□□ -0.18
MSH6-214ENST00000616033 ESRRAP11474 423 aaPredicted RBP13.94□□□□□ -0.18
MSH6-214ENST00000616033 SKIP12755 728 aa13.94□□□□□ -0.18
MSH6-214ENST00000616033 RHBDL3P58872 404 aa13.94□□□□□ -0.18
MSH6-214ENST00000616033 PPP2R5CQ13362 524 aa13.94□□□□□ -0.18
MSH6-214ENST00000616033 SIX1Q15475 284 aaPredicted RBP13.94□□□□□ -0.18
MSH6-214ENST00000616033 FAM81AQ8TBF8 368 aa13.94□□□□□ -0.18
MSH6-214ENST00000616033 C11orf70Q9BRQ4 267 aa13.94□□□□□ -0.18
MSH6-214ENST00000616033 CADM1Q9BY67 442 aaKnown RBP13.94□□□□□ -0.18
MSH6-214ENST00000616033 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.94□□□□□ -0.18
MSH6-214ENST00000616033 NEU2Q9Y3R4 380 aa13.94□□□□□ -0.18
MSH6-214ENST00000616033 LRRC42Q9Y546 428 aa13.94□□□□□ -0.18
MSH6-214ENST00000616033 ZMYM2Q9UBW7 1377 aa13.94□□□□□ -0.18
MSH6-214ENST00000616033 CCDC195A0A1B0GUA6 201 aa13.94□□□□□ -0.18
MSH6-214ENST00000616033 OPHN1O60890 802 aa13.94□□□□□ -0.18
MSH6-214ENST00000616033 ZNF189O75820 626 aaPredicted RBP13.94□□□□□ -0.18
MSH6-214ENST00000616033 EYA4O95677 639 aa13.94□□□□□ -0.18
MSH6-214ENST00000616033 SSTR1P30872 391 aa13.94□□□□□ -0.18
MSH6-214ENST00000616033 CLK2P49760 499 aaKnown RBP13.94□□□□□ -0.18
MSH6-214ENST00000616033 NFIAQ12857 509 aa13.94□□□□□ -0.18
MSH6-214ENST00000616033 PDIA2Q13087 525 aaKnown RBP13.94□□□□□ -0.18
MSH6-214ENST00000616033 MAPK6Q16659 721 aa13.94□□□□□ -0.18
MSH6-214ENST00000616033 C1QTNF12Q5T7M4 302 aa13.94□□□□□ -0.18
MSH6-214ENST00000616033 ZNF720Q7Z2F6 126 aa13.94□□□□□ -0.18
MSH6-214ENST00000616033 ETNPPLQ8TBG4 499 aa13.94□□□□□ -0.18
MSH6-214ENST00000616033 FAM210AQ96ND0 272 aa13.94□□□□□ -0.18
MSH6-214ENST00000616033 SHCBP1LQ9BZQ2 653 aa13.94□□□□□ -0.18
MSH6-214ENST00000616033 GPRC5CQ9NQ84 441 aa13.94□□□□□ -0.18
MSH6-214ENST00000616033 SAE1Q9UBE0 346 aaPredicted RBP13.94□□□□□ -0.18
MSH6-214ENST00000616033 PCDHAC2Q9Y5I4 1007 aa13.94□□□□□ -0.18
MSH6-214ENST00000616033 MYH11P35749 1972 aa13.94□□□□□ -0.18
MSH6-214ENST00000616033 SORBS3O60504 671 aa13.93□□□□□ -0.18
MSH6-214ENST00000616033 TBX10O75333 385 aa13.93□□□□□ -0.18
MSH6-214ENST00000616033 HAUS5O94927 633 aa13.93□□□□□ -0.18
MSH6-214ENST00000616033 VHLP40337 213 aa13.93□□□□□ -0.18
MSH6-214ENST00000616033 IRX4P78413 519 aa13.93□□□□□ -0.18
MSH6-214ENST00000616033 SPIRE1Q08AE8 756 aa13.93□□□□□ -0.18
MSH6-214ENST00000616033 PLEKHG4Q58EX7 1191 aa13.93□□□□□ -0.18
MSH6-214ENST00000616033 HYIQ5T013 277 aa13.93□□□□□ -0.18
MSH6-214ENST00000616033 NRG4Q8WWG1 115 aa13.93□□□□□ -0.18
MSH6-214ENST00000616033 KIFAP3Q92845 792 aa13.93□□□□□ -0.18
MSH6-214ENST00000616033 DCLRE1BQ9H816 532 aa13.93□□□□□ -0.18
MSH6-214ENST00000616033 DAGLAQ9Y4D2 1042 aa13.93□□□□□ -0.18
MSH6-214ENST00000616033 COL14A1Q05707 1796 aaKnown RBP13.93□□□□□ -0.18
MSH6-214ENST00000616033 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.93□□□□□ -0.18
MSH6-214ENST00000616033 ENO1P06733 434 aaKnown RBP13.93□□□□□ -0.18
MSH6-214ENST00000616033 CA8P35219 290 aa13.93□□□□□ -0.18
MSH6-214ENST00000616033 PPP4CP60510 307 aa13.93□□□□□ -0.18
MSH6-214ENST00000616033 GAD2Q05329 585 aa13.93□□□□□ -0.18
MSH6-214ENST00000616033 C11orf63Q6NUN7 778 aa13.93□□□□□ -0.18
MSH6-214ENST00000616033 FBXO11Q86XK2 927 aa13.93□□□□□ -0.18
MSH6-214ENST00000616033 GORASP1Q9BQQ3 440 aa13.93□□□□□ -0.18
MSH6-214ENST00000616033 WHRNQ9P202 907 aa13.93□□□□□ -0.18
MSH6-214ENST00000616033 COL16A1Q07092 1604 aaPredicted RBP13.93□□□□□ -0.18
MSH6-214ENST00000616033 STK10O94804 968 aaKnown RBP13.93□□□□□ -0.18
MSH6-214ENST00000616033 SLITRK3O94933 977 aa13.93□□□□□ -0.18
MSH6-214ENST00000616033 TROVE2P10155 538 aaKnown RBP eCLIP13.93□□□□□ -0.18
MSH6-214ENST00000616033 ARSEP51690 589 aa13.93□□□□□ -0.18
MSH6-214ENST00000616033 ROR2Q01974 943 aaKnown RBP13.93□□□□□ -0.18
MSH6-214ENST00000616033 MKRN3Q13064 507 aaKnown RBP13.93□□□□□ -0.18
MSH6-214ENST00000616033 CLEC4GQ6UXB4 293 aa13.93□□□□□ -0.18
MSH6-214ENST00000616033 LRRC74BQ6ZQY2 392 aa13.93□□□□□ -0.18
MSH6-214ENST00000616033 CBWD2Q8IUF1 395 aa13.93□□□□□ -0.18
MSH6-214ENST00000616033 ZNF75CPQ92670 426 aaPredicted RBP13.93□□□□□ -0.18
MSH6-214ENST00000616033 TMEM109Q9BVC6 243 aa13.93□□□□□ -0.18
MSH6-214ENST00000616033 PREBQ9HCU5 417 aa13.93□□□□□ -0.18
MSH6-214ENST00000616033 WRAP73Q9P2S5 460 aaPredicted RBP13.93□□□□□ -0.18
MSH6-214ENST00000616033 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.93□□□□□ -0.18
MSH6-214ENST00000616033 PHLPP1O60346 1717 aa13.93□□□□□ -0.18
MSH6-214ENST00000616033 GPR75-ASB3A0A0A6YYF3 556 aa13.92□□□□□ -0.18
MSH6-214ENST00000616033 H3BRJ5 948 aa13.92□□□□□ -0.18
MSH6-214ENST00000616033 SLC16A4O15374 487 aa13.92□□□□□ -0.18
MSH6-214ENST00000616033 PTPN4P29074 926 aa13.92□□□□□ -0.18
MSH6-214ENST00000616033 FMO1Q01740 532 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms