RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 EIF3BP55884 814 aaKnown RBP9.97□□□□□ -0.81
CLTCL1-208ENST00000615606 AP1B1Q10567 949 aa9.97□□□□□ -0.81
CLTCL1-208ENST00000615606 NAB2Q15742 525 aa9.97□□□□□ -0.81
CLTCL1-208ENST00000615606 PTGISQ16647 500 aa9.97□□□□□ -0.81
CLTCL1-208ENST00000615606 SEZ6Q53EL9 994 aa9.97□□□□□ -0.81
CLTCL1-208ENST00000615606 RCOR2Q8IZ40 523 aa9.97□□□□□ -0.81
CLTCL1-208ENST00000615606 FAM71BQ8TC56 605 aa9.97□□□□□ -0.81
CLTCL1-208ENST00000615606 STMN2Q93045 179 aa9.97□□□□□ -0.81
CLTCL1-208ENST00000615606 OSBPL9Q96SU4 736 aa9.97□□□□□ -0.81
CLTCL1-208ENST00000615606 MAF1Q9H063 256 aa9.97□□□□□ -0.81
CLTCL1-208ENST00000615606 RASSF4Q9H2L5 321 aa9.97□□□□□ -0.81
CLTCL1-208ENST00000615606 SH3BP1Q9Y3L3 701 aa9.97□□□□□ -0.81
CLTCL1-208ENST00000615606 PSMC6P62333 389 aa9.97□□□□□ -0.81
CLTCL1-208ENST00000615606 DEUP1Q05D60 604 aa9.97□□□□□ -0.81
CLTCL1-208ENST00000615606 ZNF211Q13398 564 aaPredicted RBP9.97□□□□□ -0.81
CLTCL1-208ENST00000615606 EARS2Q5JPH6 523 aaKnown RBP9.97□□□□□ -0.81
CLTCL1-208ENST00000615606 TDRD10Q5VZ19 366 aaKnown RBP9.97□□□□□ -0.81
CLTCL1-208ENST00000615606 SLC27A1Q6PCB7 646 aa9.97□□□□□ -0.81
CLTCL1-208ENST00000615606 ZPBP2Q6X784 338 aa9.97□□□□□ -0.81
CLTCL1-208ENST00000615606 ATP6V1E2Q96A05 226 aa9.97□□□□□ -0.81
CLTCL1-208ENST00000615606 HDAC11Q96DB2 347 aa9.97□□□□□ -0.81
CLTCL1-208ENST00000615606 AGPAT5Q9NUQ2 364 aa9.97□□□□□ -0.81
CLTCL1-208ENST00000615606 LRRC37A3O60309 1634 aa9.97□□□□□ -0.81
CLTCL1-208ENST00000615606 SMIM22K7EJ46 135 aa9.97□□□□□ -0.81
CLTCL1-208ENST00000615606 PIK3R2O00459 728 aa9.97□□□□□ -0.81
CLTCL1-208ENST00000615606 ATP8B1O43520 1251 aa9.97□□□□□ -0.81
CLTCL1-208ENST00000615606 USP2O75604 605 aaPredicted RBP9.97□□□□□ -0.81
CLTCL1-208ENST00000615606 GABPB1Q06547 395 aaPredicted RBP9.97□□□□□ -0.81
CLTCL1-208ENST00000615606 CYP24A1Q07973 514 aa9.97□□□□□ -0.81
CLTCL1-208ENST00000615606 TMED2Q15363 201 aa9.97□□□□□ -0.81
CLTCL1-208ENST00000615606 SCFD1Q8WVM8 642 aa9.97□□□□□ -0.81
CLTCL1-208ENST00000615606 MCUR1Q96AQ8 359 aa9.97□□□□□ -0.81
CLTCL1-208ENST00000615606 DYRK4Q9NR20 520 aa9.97□□□□□ -0.81
CLTCL1-208ENST00000615606 ABI2Q9NYB9 513 aaPredicted RBP9.97□□□□□ -0.81
CLTCL1-208ENST00000615606 KLHL14Q9P2G3 628 aa9.97□□□□□ -0.81
CLTCL1-208ENST00000615606 CYP3A7-CYP3A51PA0A087WV96 503 aa9.96□□□□□ -0.81
CLTCL1-208ENST00000615606 IQANK1A0A1B0GTG1 560 aa9.96□□□□□ -0.81
CLTCL1-208ENST00000615606 CCDC151A5D8V7 595 aa9.96□□□□□ -0.81
CLTCL1-208ENST00000615606 NFKBIEO00221 500 aa9.96□□□□□ -0.81
CLTCL1-208ENST00000615606 ACKR2O00590 384 aa9.96□□□□□ -0.81
CLTCL1-208ENST00000615606 CYB561D2O14569 222 aa9.96□□□□□ -0.81
CLTCL1-208ENST00000615606 MEIS2O14770 477 aa9.96□□□□□ -0.81
CLTCL1-208ENST00000615606 MX2P20592 715 aa9.96□□□□□ -0.81
CLTCL1-208ENST00000615606 CYP3A7P24462 503 aa9.96□□□□□ -0.81
CLTCL1-208ENST00000615606 NXNQ6DKJ4 435 aa9.96□□□□□ -0.81
CLTCL1-208ENST00000615606 CENPPQ6IPU0 288 aa9.96□□□□□ -0.81
CLTCL1-208ENST00000615606 DEFB128Q7Z7B8 93 aa9.96□□□□□ -0.81
CLTCL1-208ENST00000615606 PNMA5Q96PV4 448 aa9.96□□□□□ -0.81
CLTCL1-208ENST00000615606 CYP3A43Q9HB55 503 aa9.96□□□□□ -0.81
CLTCL1-208ENST00000615606 KCPQ6ZWJ8 1503 aa9.96□□□□□ -0.81
CLTCL1-208ENST00000615606 NRCAMQ92823 1304 aa9.96□□□□□ -0.81
CLTCL1-208ENST00000615606 SRGAP2O75044 1071 aa9.96□□□□□ -0.81
CLTCL1-208ENST00000615606 EGFRP00533 1210 aa9.96□□□□□ -0.81
CLTCL1-208ENST00000615606 VDRP11473 427 aa9.96□□□□□ -0.81
CLTCL1-208ENST00000615606 PPARDQ03181 441 aa9.96□□□□□ -0.81
CLTCL1-208ENST00000615606 PAN2Q504Q3 1202 aaKnown RBP9.96□□□□□ -0.81
CLTCL1-208ENST00000615606 TREML2Q5T2D2 321 aa9.96□□□□□ -0.81
CLTCL1-208ENST00000615606 KLC3Q6P597 504 aa9.96□□□□□ -0.81
CLTCL1-208ENST00000615606 EMBQ6PCB8 327 aa9.96□□□□□ -0.81
CLTCL1-208ENST00000615606 TTC30AQ86WT1 665 aa9.96□□□□□ -0.81
CLTCL1-208ENST00000615606 MCEEQ96PE7 176 aa9.96□□□□□ -0.81
CLTCL1-208ENST00000615606 BFARQ9NZS9 450 aa9.96□□□□□ -0.81
CLTCL1-208ENST00000615606 FAM187AA6NFU0 413 aa9.96□□□□□ -0.82
CLTCL1-208ENST00000615606 TMEM253P0C7T8 217 aa9.96□□□□□ -0.82
CLTCL1-208ENST00000615606 LHX1P48742 406 aa9.96□□□□□ -0.82
CLTCL1-208ENST00000615606 ST8SIA6P61647 398 aa9.96□□□□□ -0.82
CLTCL1-208ENST00000615606 PPP1R12CQ9BZL4 782 aa9.96□□□□□ -0.82
CLTCL1-208ENST00000615606 SAYSD1Q9NPB0 183 aa9.96□□□□□ -0.82
CLTCL1-208ENST00000615606 NAGPAQ9UK23 515 aa9.96□□□□□ -0.82
CLTCL1-208ENST00000615606 SNX24Q9Y343 169 aa9.96□□□□□ -0.82
CLTCL1-208ENST00000615606 PCDHB12Q9Y5F1 795 aa9.96□□□□□ -0.82
CLTCL1-208ENST00000615606 DFFAO00273 331 aa9.96□□□□□ -0.82
CLTCL1-208ENST00000615606 RASGRF2O14827 1237 aa9.96□□□□□ -0.82
CLTCL1-208ENST00000615606 GHRP10912 638 aa9.96□□□□□ -0.82
CLTCL1-208ENST00000615606 GPD1P21695 349 aa9.96□□□□□ -0.82
CLTCL1-208ENST00000615606 BRD2P25440 801 aaKnown RBP9.96□□□□□ -0.82
CLTCL1-208ENST00000615606 FXR1P51114 621 aaKnown RBP eCLIP9.96□□□□□ -0.82
CLTCL1-208ENST00000615606 RPL10AP62906 217 aaKnown RBP9.96□□□□□ -0.82
CLTCL1-208ENST00000615606 BEX3Q00994 111 aa9.96□□□□□ -0.82
CLTCL1-208ENST00000615606 ZNF280DQ6N043 979 aa9.96□□□□□ -0.82
CLTCL1-208ENST00000615606 TTI2Q6NXR4 508 aa9.96□□□□□ -0.82
CLTCL1-208ENST00000615606 TRIM59Q8IWR1 403 aa9.96□□□□□ -0.82
CLTCL1-208ENST00000615606 EFHBQ8N7U6 833 aa9.96□□□□□ -0.82
CLTCL1-208ENST00000615606 SLC35G2Q8TBE7 412 aa9.96□□□□□ -0.82
CLTCL1-208ENST00000615606 ASIC4Q96FT7 647 aa9.96□□□□□ -0.82
CLTCL1-208ENST00000615606 MTMR9Q96QG7 549 aa9.96□□□□□ -0.82
CLTCL1-208ENST00000615606 MRPL9Q9BYD2 267 aaKnown RBP9.96□□□□□ -0.82
CLTCL1-208ENST00000615606 KCNMB3Q9NPA1 279 aa9.96□□□□□ -0.82
CLTCL1-208ENST00000615606 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.96□□□□□ -0.821e-15■■■■■ 72.7
CLTCL1-208ENST00000615606 DPP7Q9UHL4 492 aa9.96□□□□□ -0.82
CLTCL1-208ENST00000615606 ITGA11Q9UKX5 1188 aa9.96□□□□□ -0.82
CLTCL1-208ENST00000615606 FAN1Q9Y2M0 1017 aa9.96□□□□□ -0.82
CLTCL1-208ENST00000615606 CARNS1A5YM72 827 aa9.95□□□□□ -0.82
CLTCL1-208ENST00000615606 EML1O00423 815 aa9.95□□□□□ -0.82
CLTCL1-208ENST00000615606 C2CD2LO14523 706 aa9.95□□□□□ -0.82
CLTCL1-208ENST00000615606 KRT37O76014 449 aa9.95□□□□□ -0.82
CLTCL1-208ENST00000615606 ALDH2P05091 517 aa9.95□□□□□ -0.82
CLTCL1-208ENST00000615606 TAF1BQ53T94 588 aaPredicted RBP9.95□□□□□ -0.82
CLTCL1-208ENST00000615606 SPRYD7Q5W111 196 aa9.95□□□□□ -0.82
CLTCL1-208ENST00000615606 TRIM65Q6PJ69 517 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms