RNA–Protein interactions for RNA: ENST00000615540.4

PDLIM5-222, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 6,219 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-222ENST00000615540 SLC1A1P43005 524 aa9.44□□□□□ -0.9
PDLIM5-222ENST00000615540 RARRES1P49788 294 aa9.44□□□□□ -0.9
PDLIM5-222ENST00000615540 FIGNQ5HY92 759 aa9.44□□□□□ -0.9
PDLIM5-222ENST00000615540 C9orf131Q5VYM1 1079 aa9.44□□□□□ -0.9
PDLIM5-222ENST00000615540 ABI1Q8IZP0 508 aa9.44□□□□□ -0.9
PDLIM5-222ENST00000615540 C9orf72Q96LT7 481 aa9.44□□□□□ -0.9
PDLIM5-222ENST00000615540 BCAS3Q9H6U6 928 aa9.44□□□□□ -0.9
PDLIM5-222ENST00000615540 TRAF3IP3Q9Y228 551 aa9.44□□□□□ -0.9
PDLIM5-222ENST00000615540 A0A087WUV0 522 aaPredicted RBP9.44□□□□□ -0.9
PDLIM5-222ENST00000615540 CYP3A7-CYP3A51PA0A087WV96 503 aa9.44□□□□□ -0.9
PDLIM5-222ENST00000615540 APOL1O14791 398 aa9.44□□□□□ -0.9
PDLIM5-222ENST00000615540 SRGAP2BP0DMP2 458 aa9.44□□□□□ -0.9
PDLIM5-222ENST00000615540 CYP3A7P24462 503 aa9.44□□□□□ -0.9
PDLIM5-222ENST00000615540 TRIM72Q6ZMU5 477 aa9.44□□□□□ -0.9
PDLIM5-222ENST00000615540 TRPM4Q8TD43 1214 aa9.44□□□□□ -0.9
PDLIM5-222ENST00000615540 ZNF473Q8WTR7 871 aaKnown RBP9.44□□□□□ -0.9
PDLIM5-222ENST00000615540 SLC35C1Q96A29 364 aa9.44□□□□□ -0.9
PDLIM5-222ENST00000615540 CALR3Q96L12 384 aaKnown RBP9.44□□□□□ -0.9
PDLIM5-222ENST00000615540 DNAJC18Q9H819 358 aa9.44□□□□□ -0.9
PDLIM5-222ENST00000615540 SPON1Q9HCB6 807 aa9.44□□□□□ -0.9
PDLIM5-222ENST00000615540 UVRAGQ9P2Y5 699 aa9.44□□□□□ -0.9
PDLIM5-222ENST00000615540 CELF2O95319 508 aaKnown RBP9.44□□□□□ -0.9
PDLIM5-222ENST00000615540 CYP3A4P08684 503 aa9.44□□□□□ -0.9
PDLIM5-222ENST00000615540 KRT10P13645 584 aa9.44□□□□□ -0.9
PDLIM5-222ENST00000615540 MDH1P40925 334 aaKnown RBP9.44□□□□□ -0.9
PDLIM5-222ENST00000615540 MEA1Q16626 185 aa9.44□□□□□ -0.9
PDLIM5-222ENST00000615540 C4orf19Q8IY42 314 aa9.44□□□□□ -0.9
PDLIM5-222ENST00000615540 RCOR2Q8IZ40 523 aa9.44□□□□□ -0.9
PDLIM5-222ENST00000615540 SPATA20Q8TB22 786 aa9.44□□□□□ -0.9
PDLIM5-222ENST00000615540 KLC2Q9H0B6 622 aa9.44□□□□□ -0.9
PDLIM5-222ENST00000615540 BAZ2AQ9UIF9 1905 aaKnown RBP9.44□□□□□ -0.9
PDLIM5-222ENST00000615540 PDE2AO00408 941 aaPredicted RBP9.44□□□□□ -0.9
PDLIM5-222ENST00000615540 PLSCR1O15162 318 aa9.44□□□□□ -0.9
PDLIM5-222ENST00000615540 SLC35G1Q2M3R5 365 aa9.44□□□□□ -0.9
PDLIM5-222ENST00000615540 CCDC117Q8IWD4 279 aaPredicted RBP9.44□□□□□ -0.9
PDLIM5-222ENST00000615540 SCN4BQ8IWT1 228 aa9.44□□□□□ -0.9
PDLIM5-222ENST00000615540 GPRC5AQ8NFJ5 357 aa9.44□□□□□ -0.9
PDLIM5-222ENST00000615540 VIPAS39Q9H9C1 493 aa9.44□□□□□ -0.9
PDLIM5-222ENST00000615540 OLFML3Q9NRN5 406 aa9.44□□□□□ -0.9
PDLIM5-222ENST00000615540 DFFAO00273 331 aa9.44□□□□□ -0.9
PDLIM5-222ENST00000615540 DDX3XO00571 662 aaKnown RBP eCLIP9.44□□□□□ -0.98e-10■■■□□ 15.6
PDLIM5-222ENST00000615540 MOCS2O96007 188 aaPredicted RBP9.44□□□□□ -0.9
PDLIM5-222ENST00000615540 CYP2C8P10632 490 aa9.44□□□□□ -0.9
PDLIM5-222ENST00000615540 PBX1P40424 430 aa9.44□□□□□ -0.9
PDLIM5-222ENST00000615540 SEC24CP53992 1094 aa9.44□□□□□ -0.9
PDLIM5-222ENST00000615540 LAMTOR4Q0VGL1 99 aa9.44□□□□□ -0.9
PDLIM5-222ENST00000615540 DAB2IPQ5VWQ8 1189 aa9.44□□□□□ -0.9
PDLIM5-222ENST00000615540 PDIK1LQ8N165 341 aa9.44□□□□□ -0.9
PDLIM5-222ENST00000615540 SLC13A1Q9BZW2 595 aa9.44□□□□□ -0.9
PDLIM5-222ENST00000615540 KCND1Q9NSA2 647 aa9.44□□□□□ -0.9
PDLIM5-222ENST00000615540 DMGDHQ9UI17 866 aaKnown RBP9.44□□□□□ -0.9
PDLIM5-222ENST00000615540 VAV3Q9UKW4 847 aa9.44□□□□□ -0.9
PDLIM5-222ENST00000615540 CCDC78A2IDD5 438 aa9.43□□□□□ -0.9
PDLIM5-222ENST00000615540 BRAFP15056 766 aa9.43□□□□□ -0.9
PDLIM5-222ENST00000615540 CDR2Q01850 454 aa9.43□□□□□ -0.9
PDLIM5-222ENST00000615540 TATDN1Q6P1N9 297 aa9.43□□□□□ -0.9
PDLIM5-222ENST00000615540 FAM83AQ86UY5 434 aa9.43□□□□□ -0.9
PDLIM5-222ENST00000615540 IRF2BP1Q8IU81 584 aa9.43□□□□□ -0.9
PDLIM5-222ENST00000615540 LNX1Q8TBB1 728 aaPredicted RBP9.43□□□□□ -0.9
PDLIM5-222ENST00000615540 KCTD10Q9H3F6 313 aa9.43□□□□□ -0.9
PDLIM5-222ENST00000615540 XPO7Q9UIA9 1087 aaKnown RBP9.43□□□□□ -0.9
PDLIM5-222ENST00000615540 IQANK1A0A1B0GTG1 560 aa9.43□□□□□ -0.9
PDLIM5-222ENST00000615540 AP3M2P53677 418 aa9.43□□□□□ -0.9
PDLIM5-222ENST00000615540 MYL6P60660 151 aa9.43□□□□□ -0.9
PDLIM5-222ENST00000615540 MOB2Q70IA6 237 aa9.43□□□□□ -0.9
PDLIM5-222ENST00000615540 ARMCX2Q7L311 632 aa9.43□□□□□ -0.9
PDLIM5-222ENST00000615540 SDCCAG8Q86SQ7 713 aaPredicted RBP9.43□□□□□ -0.9
PDLIM5-222ENST00000615540 PPM1NQ8N819 430 aa9.43□□□□□ -0.9
PDLIM5-222ENST00000615540 ATL2Q8NHH9 583 aa9.43□□□□□ -0.9
PDLIM5-222ENST00000615540 RUBCNQ92622 972 aa9.43□□□□□ -0.9
PDLIM5-222ENST00000615540 PITPNM3Q9BZ71 974 aa9.43□□□□□ -0.9
PDLIM5-222ENST00000615540 VGLL4Q14135 290 aa9.43□□□□□ -0.9
PDLIM5-222ENST00000615540 PSMD6Q15008 389 aa9.43□□□□□ -0.9
PDLIM5-222ENST00000615540 CLEC16AQ2KHT3 1053 aa9.43□□□□□ -0.9
PDLIM5-222ENST00000615540 TREML2Q5T2D2 321 aa9.43□□□□□ -0.9
PDLIM5-222ENST00000615540 KCNV1Q6PIU1 500 aa9.43□□□□□ -0.9
PDLIM5-222ENST00000615540 C4orf33Q8N1A6 199 aa9.43□□□□□ -0.9
PDLIM5-222ENST00000615540 EXT2Q93063 718 aa9.43□□□□□ -0.9
PDLIM5-222ENST00000615540 P2RX7Q99572 595 aaKnown RBP9.43□□□□□ -0.9
PDLIM5-222ENST00000615540 MTFR1LQ9H019 292 aa9.43□□□□□ -0.9
PDLIM5-222ENST00000615540 KLHL8Q9P2G9 620 aaPredicted RBP9.43□□□□□ -0.9
PDLIM5-222ENST00000615540 DCTN4Q9UJW0 460 aa9.43□□□□□ -0.9
PDLIM5-222ENST00000615540 TCP11X1B4DZS4 312 aa9.43□□□□□ -0.9
PDLIM5-222ENST00000615540 ATP9AO75110 1047 aa9.43□□□□□ -0.9
PDLIM5-222ENST00000615540 PTPRAP18433 802 aa9.43□□□□□ -0.9
PDLIM5-222ENST00000615540 ALDH5A1P51649 535 aaPredicted RBP9.43□□□□□ -0.9
PDLIM5-222ENST00000615540 NOP9Q86U38 636 aaKnown RBP9.43□□□□□ -0.9
PDLIM5-222ENST00000615540 CCDC60Q8IWA6 550 aaPredicted RBP9.43□□□□□ -0.9
PDLIM5-222ENST00000615540 FEZF2Q8TBJ5 459 aa9.43□□□□□ -0.9
PDLIM5-222ENST00000615540 HVCN1Q96D96 273 aa9.43□□□□□ -0.9
PDLIM5-222ENST00000615540 PPP1R12CQ9BZL4 782 aa9.43□□□□□ -0.9
PDLIM5-222ENST00000615540 ECT2Q9H8V3 914 aa9.43□□□□□ -0.9
PDLIM5-222ENST00000615540 PCDHB2Q9Y5E7 798 aa9.43□□□□□ -0.9
PDLIM5-222ENST00000615540 TRIM66O15016 1216 aa9.43□□□□□ -0.9
PDLIM5-222ENST00000615540 EIF3HO15372 352 aaKnown RBP eCLIP9.43□□□□□ -0.9
PDLIM5-222ENST00000615540 P4HA2O15460 535 aa9.43□□□□□ -0.9
PDLIM5-222ENST00000615540 CXCL8P10145 99 aa9.43□□□□□ -0.9
PDLIM5-222ENST00000615540 ANXA13P27216 316 aa9.43□□□□□ -0.9
PDLIM5-222ENST00000615540 ZNF157P51786 506 aaPredicted RBP9.43□□□□□ -0.9
PDLIM5-222ENST00000615540 PPP3CAQ08209 521 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms