RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 PPFIA4O75335 1185 aa20.46■□□□□ 0.87
MMP28-204ENST00000615136 MMP3P08254 477 aa20.46■□□□□ 0.87
MMP28-204ENST00000615136 CLTAP09496 248 aa20.46■□□□□ 0.87
MMP28-204ENST00000615136 HOXC6P09630 235 aa20.46■□□□□ 0.87
MMP28-204ENST00000615136 MAPK4P31152 587 aa20.46■□□□□ 0.87
MMP28-204ENST00000615136 HSPA9P38646 679 aaKnown RBP20.46■□□□□ 0.87
MMP28-204ENST00000615136 TRADDQ15628 312 aa20.46■□□□□ 0.87
MMP28-204ENST00000615136 TTMPQ5BVD1 217 aa20.46■□□□□ 0.87
MMP28-204ENST00000615136 MARCH8Q5T0T0 291 aa20.46■□□□□ 0.87
MMP28-204ENST00000615136 CD302Q8IX05 232 aa20.46■□□□□ 0.87
MMP28-204ENST00000615136 RHOT2Q8IXI1 618 aa20.46■□□□□ 0.87
MMP28-204ENST00000615136 EFCAB13Q8IY85 973 aa20.46■□□□□ 0.87
MMP28-204ENST00000615136 PIK3R5Q8WYR1 880 aa20.46■□□□□ 0.87
MMP28-204ENST00000615136 LENG1Q96BZ8 264 aaPredicted RBP20.46■□□□□ 0.87
MMP28-204ENST00000615136 BTBD6Q96KE9 485 aa20.46■□□□□ 0.87
MMP28-204ENST00000615136 CDT1Q9H211 546 aa20.46■□□□□ 0.87
MMP28-204ENST00000615136 FLRT1Q9NZU1 646 aa20.46■□□□□ 0.87
MMP28-204ENST00000615136 ZSWIM8A7E2V4 1837 aa20.46■□□□□ 0.87
MMP28-204ENST00000615136 GPR25O00155 361 aa20.46■□□□□ 0.87
MMP28-204ENST00000615136 AMHR2Q16671 573 aa20.46■□□□□ 0.87
MMP28-204ENST00000615136 CFAP58Q5T655 872 aa20.46■□□□□ 0.87
MMP28-204ENST00000615136 MTHFD1LQ6UB35 978 aa20.46■□□□□ 0.87
MMP28-204ENST00000615136 RASAL3Q86YV0 1011 aa20.46■□□□□ 0.87
MMP28-204ENST00000615136 WDR49Q8IV35 697 aa20.46■□□□□ 0.87
MMP28-204ENST00000615136 DDX47Q9H0S4 455 aaKnown RBP20.46■□□□□ 0.87
MMP28-204ENST00000615136 CARD9Q9H257 536 aa20.46■□□□□ 0.87
MMP28-204ENST00000615136 ABHD16BQ9H3Z7 469 aa20.46■□□□□ 0.87
MMP28-204ENST00000615136 AKT3Q9Y243 479 aa20.46■□□□□ 0.87
MMP28-204ENST00000615136 TMEM110-MUSTN1A8MSY1 372 aa20.45■□□□□ 0.86
MMP28-204ENST00000615136 GUCY2FP51841 1108 aa20.45■□□□□ 0.86
MMP28-204ENST00000615136 MYL6P60660 151 aa20.45■□□□□ 0.86
MMP28-204ENST00000615136 CLEC16AQ2KHT3 1053 aa20.45■□□□□ 0.86
MMP28-204ENST00000615136 C2CD6Q53TS8 623 aa20.45■□□□□ 0.86
MMP28-204ENST00000615136 TMEM270Q6UE05 265 aa20.45■□□□□ 0.86
MMP28-204ENST00000615136 OR6J1Q8NGC5 347 aa20.45■□□□□ 0.86
MMP28-204ENST00000615136 ARL8AQ96BM9 186 aa20.45■□□□□ 0.86
MMP28-204ENST00000615136 ALG6Q9Y672 507 aa20.45■□□□□ 0.86
MMP28-204ENST00000615136 ASAP2O43150 1006 aa20.44■□□□□ 0.86
MMP28-204ENST00000615136 UNGP13051 313 aaPredicted RBP20.44■□□□□ 0.86
MMP28-204ENST00000615136 ITGA4P13612 1032 aa20.44■□□□□ 0.86
MMP28-204ENST00000615136 TMEM132AQ24JP5 1023 aa20.44■□□□□ 0.86
MMP28-204ENST00000615136 ACAD10Q6JQN1 1059 aa20.44■□□□□ 0.86
MMP28-204ENST00000615136 LLGL2Q6P1M3 1020 aa20.44■□□□□ 0.86
MMP28-204ENST00000615136 SEC14L1Q92503 715 aa20.44■□□□□ 0.86
MMP28-204ENST00000615136 ALG3Q92685 438 aa20.44■□□□□ 0.86
MMP28-204ENST00000615136 ZNF653Q96CK0 615 aa20.44■□□□□ 0.86
MMP28-204ENST00000615136 CPB2Q96IY4 423 aa20.44■□□□□ 0.86
MMP28-204ENST00000615136 PCDHB4Q9Y5E5 795 aa20.44■□□□□ 0.86
MMP28-204ENST00000615136 SLC15A5A6NIM6 579 aa20.44■□□□□ 0.86
MMP28-204ENST00000615136 CXCL8P10145 99 aa20.44■□□□□ 0.86
MMP28-204ENST00000615136 MARCKSL1P49006 195 aa20.44■□□□□ 0.86
MMP28-204ENST00000615136 ZNF157P51786 506 aaPredicted RBP20.44■□□□□ 0.86
MMP28-204ENST00000615136 C11orf63Q6NUN7 778 aa20.44■□□□□ 0.86
MMP28-204ENST00000615136 PHLDB2Q86SQ0 1253 aa20.44■□□□□ 0.86
MMP28-204ENST00000615136 C1orf131Q8NDD1 294 aaKnown RBP20.44■□□□□ 0.86
MMP28-204ENST00000615136 CPA5Q8WXQ8 436 aa20.44■□□□□ 0.86
MMP28-204ENST00000615136 NUP85Q9BW27 656 aa20.44■□□□□ 0.86
MMP28-204ENST00000615136 TNFSF13BQ9Y275 285 aa20.44■□□□□ 0.86
MMP28-204ENST00000615136 PCDHB2Q9Y5E7 798 aa20.44■□□□□ 0.86
MMP28-204ENST00000615136 ASS1P00966 412 aaKnown RBP20.43■□□□□ 0.86
MMP28-204ENST00000615136 CYP1A2P05177 515 aa20.43■□□□□ 0.86
MMP28-204ENST00000615136 HOXD8P13378 290 aaPredicted RBP20.43■□□□□ 0.86
MMP28-204ENST00000615136 TFAMQ00059 246 aaKnown RBP20.43■□□□□ 0.86
MMP28-204ENST00000615136 POU5F1Q01860 360 aaKnown RBP20.43■□□□□ 0.86
MMP28-204ENST00000615136 GRM1Q13255 1194 aa20.43■□□□□ 0.86
MMP28-204ENST00000615136 CCL14Q16627 93 aa20.43■□□□□ 0.86
MMP28-204ENST00000615136 MORN1Q5T089 497 aa20.43■□□□□ 0.86
MMP28-204ENST00000615136 KRT35Q92764 455 aa20.43■□□□□ 0.86
MMP28-204ENST00000615136 NFKBIZQ9BYH8 718 aa20.43■□□□□ 0.86
MMP28-204ENST00000615136 MAGEB2O15479 319 aa20.43■□□□□ 0.86
MMP28-204ENST00000615136 PHKA2P46019 1235 aa20.43■□□□□ 0.86
MMP28-204ENST00000615136 SKOR1P84550 965 aa20.43■□□□□ 0.86
MMP28-204ENST00000615136 ZNF211Q13398 564 aaPredicted RBP20.43■□□□□ 0.86
MMP28-204ENST00000615136 MESDQ14696 234 aa20.43■□□□□ 0.86
MMP28-204ENST00000615136 GRIK4Q16099 956 aa20.43■□□□□ 0.86
MMP28-204ENST00000615136 AADACL2Q6P093 401 aa20.43■□□□□ 0.86
MMP28-204ENST00000615136 MAATS1Q7Z4T9 603 aa20.43■□□□□ 0.86
MMP28-204ENST00000615136 PASD1Q8IV76 773 aa20.43■□□□□ 0.86
MMP28-204ENST00000615136 UBR7Q8N806 425 aa20.43■□□□□ 0.86
MMP28-204ENST00000615136 RBBP8NLQ8NC74 664 aaPredicted RBP20.43■□□□□ 0.86
MMP28-204ENST00000615136 CCDC26Q8TAB7 109 aa20.43■□□□□ 0.86
MMP28-204ENST00000615136 CYFIP2Q96F07 1278 aa20.43■□□□□ 0.86
MMP28-204ENST00000615136 GTF3C4Q9UKN8 822 aa20.43■□□□□ 0.86
MMP28-204ENST00000615136 NR2E1Q9Y466 385 aa20.43■□□□□ 0.86
MMP28-204ENST00000615136 ZNF236Q9UL36 1845 aa20.42■□□□□ 0.86
MMP28-204ENST00000615136 MTA2O94776 668 aa20.42■□□□□ 0.86
MMP28-204ENST00000615136 KRT14P02533 472 aa20.42■□□□□ 0.86
MMP28-204ENST00000615136 FGGP02679 453 aa20.42■□□□□ 0.86
MMP28-204ENST00000615136 TNFAIP2Q03169 654 aa20.42■□□□□ 0.86
MMP28-204ENST00000615136 HLTFQ14527 1009 aaKnown RBP eCLIP20.42■□□□□ 0.86
MMP28-204ENST00000615136 ZNF564Q8TBZ8 553 aaPredicted RBP20.42■□□□□ 0.86
MMP28-204ENST00000615136 FAM81BQ96LP2 452 aa20.42■□□□□ 0.86
MMP28-204ENST00000615136 PDZD7Q9H5P4 517 aa20.42■□□□□ 0.86
MMP28-204ENST00000615136 SETD4Q9NVD3 440 aa20.42■□□□□ 0.86
MMP28-204ENST00000615136 PRMT7Q9NVM4 692 aaPredicted RBP20.42■□□□□ 0.86
MMP28-204ENST00000615136 AMACRQ9UHK6 382 aa20.42■□□□□ 0.86
MMP28-204ENST00000615136 CNTN6Q9UQ52 1028 aa20.42■□□□□ 0.86
MMP28-204ENST00000615136 DYNC1LI2O43237 492 aaPredicted RBP20.41■□□□□ 0.86
MMP28-204ENST00000615136 COMTP21964 271 aa20.41■□□□□ 0.86
MMP28-204ENST00000615136 FGFR4P22455 802 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms