RNA–Protein interactions for RNA: ENST00000614502.4

PDLIM2-218, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-218ENST00000614502 ZNF197O14709 1029 aa13.23□□□□□ -0.29
PDLIM2-218ENST00000614502 TRAK2O60296 914 aa13.23□□□□□ -0.29
PDLIM2-218ENST00000614502 ABLIM3O94929 683 aa13.23□□□□□ -0.29
PDLIM2-218ENST00000614502 CYP3A5P20815 502 aa13.23□□□□□ -0.29
PDLIM2-218ENST00000614502 MRPL58Q14197 206 aaKnown RBP13.23□□□□□ -0.29
PDLIM2-218ENST00000614502 CTXN3Q4LDR2 81 aa13.23□□□□□ -0.29
PDLIM2-218ENST00000614502 GPBP1Q86WP2 473 aa13.23□□□□□ -0.29
PDLIM2-218ENST00000614502 HSCBQ8IWL3 235 aa13.23□□□□□ -0.29
PDLIM2-218ENST00000614502 TCEAL8Q8IYN2 117 aa13.23□□□□□ -0.29
PDLIM2-218ENST00000614502 MYCT1Q8N699 235 aa13.23□□□□□ -0.29
PDLIM2-218ENST00000614502 LEMD2Q8NC56 503 aa13.23□□□□□ -0.29
PDLIM2-218ENST00000614502 RPF1Q9H9Y2 349 aaKnown RBP13.23□□□□□ -0.29
PDLIM2-218ENST00000614502 TBC1D17Q9HA65 648 aa13.23□□□□□ -0.29
PDLIM2-218ENST00000614502 GDE1Q9NZC3 331 aa13.23□□□□□ -0.29
PDLIM2-218ENST00000614502 DNMT3BQ9UBC3 853 aaKnown RBP13.23□□□□□ -0.29
PDLIM2-218ENST00000614502 PCDHB8Q9UN66 801 aa13.23□□□□□ -0.29
PDLIM2-218ENST00000614502 SIT1Q9Y3P8 196 aa13.23□□□□□ -0.29
PDLIM2-218ENST00000614502 CEP250Q9BV73 2442 aa13.23□□□□□ -0.29
PDLIM2-218ENST00000614502 GPR179Q6PRD1 2367 aa13.23□□□□□ -0.29
PDLIM2-218ENST00000614502 TCHHQ07283 1943 aa13.22□□□□□ -0.29
PDLIM2-218ENST00000614502 WDR27A2RRH5 827 aa13.22□□□□□ -0.29
PDLIM2-218ENST00000614502 K7ENM7 598 aa13.22□□□□□ -0.29
PDLIM2-218ENST00000614502 HNRNPDLO14979 420 aaKnown RBP13.22□□□□□ -0.29
PDLIM2-218ENST00000614502 OGTO15294 1046 aa13.22□□□□□ -0.29
PDLIM2-218ENST00000614502 TBC1D4O60343 1298 aa13.22□□□□□ -0.29
PDLIM2-218ENST00000614502 TBCAO75347 108 aaKnown RBP13.22□□□□□ -0.29
PDLIM2-218ENST00000614502 MICAL2O94851 1124 aa13.22□□□□□ -0.29
PDLIM2-218ENST00000614502 PIGRP01833 764 aa13.22□□□□□ -0.29
PDLIM2-218ENST00000614502 DCNP07585 359 aaKnown RBP13.22□□□□□ -0.29
PDLIM2-218ENST00000614502 RHOP08100 348 aa13.22□□□□□ -0.29
PDLIM2-218ENST00000614502 CXCL8P10145 99 aa13.22□□□□□ -0.29
PDLIM2-218ENST00000614502 LRPAP1P30533 357 aa13.22□□□□□ -0.29
PDLIM2-218ENST00000614502 ZNF131P52739 623 aa13.22□□□□□ -0.29
PDLIM2-218ENST00000614502 STARD6P59095 220 aa13.22□□□□□ -0.29
PDLIM2-218ENST00000614502 NTHL1P78549 312 aa13.22□□□□□ -0.29
PDLIM2-218ENST00000614502 PRKCQQ04759 706 aa13.22□□□□□ -0.29
PDLIM2-218ENST00000614502 SF3A1Q15459 793 aaKnown RBP13.22□□□□□ -0.29
PDLIM2-218ENST00000614502 ARSHQ5FYA8 562 aa13.22□□□□□ -0.29
PDLIM2-218ENST00000614502 SPECC1Q5M775 1068 aa13.22□□□□□ -0.29
PDLIM2-218ENST00000614502 IQCEQ6IPM2 695 aa13.22□□□□□ -0.29
PDLIM2-218ENST00000614502 RSPO2Q6UXX9 243 aaPredicted RBP13.22□□□□□ -0.29
PDLIM2-218ENST00000614502 KRI1Q8N9T8 703 aaKnown RBP13.22□□□□□ -0.29
PDLIM2-218ENST00000614502 LARP4BQ92615 738 aaKnown RBP13.22□□□□□ -0.29
PDLIM2-218ENST00000614502 RAD54LQ92698 747 aa13.22□□□□□ -0.29
PDLIM2-218ENST00000614502 DDX12PQ92771 950 aa13.22□□□□□ -0.29
PDLIM2-218ENST00000614502 FGF14Q92915 247 aa13.22□□□□□ -0.29
PDLIM2-218ENST00000614502 C18orf25Q96B23 403 aaPredicted RBP13.22□□□□□ -0.29
PDLIM2-218ENST00000614502 KIF12Q96FN5 646 aa13.22□□□□□ -0.29
PDLIM2-218ENST00000614502 REEP2Q9BRK0 252 aa13.22□□□□□ -0.29
PDLIM2-218ENST00000614502 RPP25Q9BUL9 199 aaKnown RBP13.22□□□□□ -0.29
PDLIM2-218ENST00000614502 CCSER1Q9C0I3 900 aa13.22□□□□□ -0.29
PDLIM2-218ENST00000614502 SEMA4AQ9H3S1 761 aa13.22□□□□□ -0.29
PDLIM2-218ENST00000614502 CYP4F11Q9HBI6 524 aa13.22□□□□□ -0.29
PDLIM2-218ENST00000614502 CCDC39Q9UFE4 941 aa13.22□□□□□ -0.29
PDLIM2-218ENST00000614502 FBXL5Q9UKA1 691 aa13.22□□□□□ -0.29
PDLIM2-218ENST00000614502 TBX20Q9UMR3 447 aa13.22□□□□□ -0.29
PDLIM2-218ENST00000614502 R4GN57 208 aa13.22□□□□□ -0.29
PDLIM2-218ENST00000614502 ANK1P16157 1881 aa13.21□□□□□ -0.29
PDLIM2-218ENST00000614502 PATJQ8NI35 1801 aa13.21□□□□□ -0.29
PDLIM2-218ENST00000614502 NPHP3-ACAD11A0A0J9YXS1 232 aa13.21□□□□□ -0.29
PDLIM2-218ENST00000614502 TTC26A0AVF1 554 aa13.21□□□□□ -0.29
PDLIM2-218ENST00000614502 LRRN2O75325 713 aa13.21□□□□□ -0.29
PDLIM2-218ENST00000614502 ECI2O75521 394 aa13.21□□□□□ -0.29
PDLIM2-218ENST00000614502 IGFBP6P24592 240 aaPredicted RBP13.21□□□□□ -0.29
PDLIM2-218ENST00000614502 TXLNAP40222 546 aa13.21□□□□□ -0.29
PDLIM2-218ENST00000614502 ARPP19P56211 112 aa13.21□□□□□ -0.29
PDLIM2-218ENST00000614502 CACNB1Q02641 598 aaPredicted RBP13.21□□□□□ -0.29
PDLIM2-218ENST00000614502 YWHAHQ04917 246 aaPredicted RBP13.21□□□□□ -0.29
PDLIM2-218ENST00000614502 DHX8Q14562 1220 aaKnown RBP13.21□□□□□ -0.29
PDLIM2-218ENST00000614502 CYP4A22Q5TCH4 519 aa13.21□□□□□ -0.29
PDLIM2-218ENST00000614502 SLFN12LQ6IEE8 588 aa13.21□□□□□ -0.29
PDLIM2-218ENST00000614502 PARM1Q6UWI2 310 aa13.21□□□□□ -0.29
PDLIM2-218ENST00000614502 USP37Q86T82 979 aa13.21□□□□□ -0.29
PDLIM2-218ENST00000614502 NPAS3Q8IXF0 933 aa13.21□□□□□ -0.29
PDLIM2-218ENST00000614502 BEST2Q8NFU1 509 aa13.21□□□□□ -0.29
PDLIM2-218ENST00000614502 ITFG1Q8TB96 612 aa13.21□□□□□ -0.29
PDLIM2-218ENST00000614502 BORCS6Q96GS4 357 aa13.21□□□□□ -0.29
PDLIM2-218ENST00000614502 ZNF512Q96ME7 567 aaPredicted RBP13.21□□□□□ -0.29
PDLIM2-218ENST00000614502 FOXD4L1Q9NU39 408 aa13.21□□□□□ -0.29
PDLIM2-218ENST00000614502 HCFC1R1Q9NWW0 138 aa13.21□□□□□ -0.29
PDLIM2-218ENST00000614502 DLGAP2Q9P1A6 1054 aa13.21□□□□□ -0.29
PDLIM2-218ENST00000614502 STK17AQ9UEE5 414 aa13.21□□□□□ -0.29
PDLIM2-218ENST00000614502 AFF4Q9UHB7 1163 aaKnown RBP13.21□□□□□ -0.29
PDLIM2-218ENST00000614502 DNAH14Q0VDD8 3507 aa13.21□□□□□ -0.3
PDLIM2-218ENST00000614502 VPS37CA5D8V6 355 aaPredicted RBP13.2□□□□□ -0.3
PDLIM2-218ENST00000614502 M0QZQ0 153 aa13.2□□□□□ -0.3
PDLIM2-218ENST00000614502 CPB1P15086 417 aa13.2□□□□□ -0.3
PDLIM2-218ENST00000614502 GLULP15104 373 aa13.2□□□□□ -0.3
PDLIM2-218ENST00000614502 PLCG1P19174 1290 aa13.2□□□□□ -0.3
PDLIM2-218ENST00000614502 SYT1P21579 422 aa13.2□□□□□ -0.3
PDLIM2-218ENST00000614502 DDIT3P35638 169 aa13.2□□□□□ -0.3
PDLIM2-218ENST00000614502 MAGEA9P43362 315 aa13.2□□□□□ -0.3
PDLIM2-218ENST00000614502 GPC5P78333 572 aa13.2□□□□□ -0.3
PDLIM2-218ENST00000614502 GTF2BQ00403 316 aa13.2□□□□□ -0.3
PDLIM2-218ENST00000614502 POU5F1Q01860 360 aaKnown RBP13.2□□□□□ -0.3
PDLIM2-218ENST00000614502 PLD1Q13393 1074 aa13.2□□□□□ -0.3
PDLIM2-218ENST00000614502 MCM6Q14566 821 aa13.2□□□□□ -0.3
PDLIM2-218ENST00000614502 ZBTB6Q15916 424 aa13.2□□□□□ -0.3
PDLIM2-218ENST00000614502 SEZ6Q53EL9 994 aa13.2□□□□□ -0.3
PDLIM2-218ENST00000614502 ZC3H14Q6PJT7 736 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms