RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 BFSP1Q12934 665 aa14.32□□□□□ -0.12
MDC1-209ENST00000613547 MYO1EQ12965 1108 aa14.32□□□□□ -0.12
MDC1-209ENST00000613547 STX1AQ16623 288 aa14.32□□□□□ -0.12
MDC1-209ENST00000613547 CCDC40Q4G0X9 1142 aa14.32□□□□□ -0.12
MDC1-209ENST00000613547 FAM171A1Q5VUB5 890 aa14.32□□□□□ -0.12
MDC1-209ENST00000613547 LMBRD2Q68DH5 695 aaPredicted RBP14.32□□□□□ -0.12
MDC1-209ENST00000613547 FILIP1Q7Z7B0 1213 aa14.32□□□□□ -0.12
MDC1-209ENST00000613547 ZC3H3Q8IXZ2 948 aaKnown RBP14.32□□□□□ -0.12
MDC1-209ENST00000613547 MICALL1Q8N3F8 863 aa14.32□□□□□ -0.12
MDC1-209ENST00000613547 EEF2KMTQ96G04 330 aa14.32□□□□□ -0.12
MDC1-209ENST00000613547 ZBP1Q9H171 429 aa14.32□□□□□ -0.12
MDC1-209ENST00000613547 NSUN3Q9H649 340 aaKnown RBP14.32□□□□□ -0.12
MDC1-209ENST00000613547 METTL14Q9HCE5 456 aaKnown RBP14.32□□□□□ -0.12
MDC1-209ENST00000613547 ARMCX3Q9UH62 379 aaPredicted RBP14.32□□□□□ -0.12
MDC1-209ENST00000613547 LAMA2P24043 3122 aaKnown RBP14.32□□□□□ -0.12
MDC1-209ENST00000613547 ANO9A1A5B4 782 aa14.31□□□□□ -0.12
MDC1-209ENST00000613547 LRRIQ3A6PVS8 624 aaPredicted RBP14.31□□□□□ -0.12
MDC1-209ENST00000613547 IKBKBO14920 756 aa14.31□□□□□ -0.12
MDC1-209ENST00000613547 FSCN2O14926 492 aa14.31□□□□□ -0.12
MDC1-209ENST00000613547 CXCL14O95715 111 aa14.31□□□□□ -0.12
MDC1-209ENST00000613547 POLR2BP30876 1174 aaKnown RBP14.31□□□□□ -0.12
MDC1-209ENST00000613547 TAF6P49848 677 aa14.31□□□□□ -0.12
MDC1-209ENST00000613547 CLDN10P78369 228 aa14.31□□□□□ -0.12
MDC1-209ENST00000613547 BIRC3Q13489 604 aa14.31□□□□□ -0.12
MDC1-209ENST00000613547 TRPC3Q13507 836 aa14.31□□□□□ -0.12
MDC1-209ENST00000613547 CAMK1Q14012 370 aa14.31□□□□□ -0.12
MDC1-209ENST00000613547 SV2CQ496J9 727 aa14.31□□□□□ -0.12
MDC1-209ENST00000613547 PLPP4Q5VZY2 271 aa14.31□□□□□ -0.12
MDC1-209ENST00000613547 DSTYKQ6XUX3 929 aa14.31□□□□□ -0.12
MDC1-209ENST00000613547 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.31□□□□□ -0.12
MDC1-209ENST00000613547 TRAPPC11Q7Z392 1133 aa14.31□□□□□ -0.12
MDC1-209ENST00000613547 CEP57Q86XR8 500 aa14.31□□□□□ -0.12
MDC1-209ENST00000613547 GPR65Q8IYL9 337 aa14.31□□□□□ -0.12
MDC1-209ENST00000613547 RNF168Q8IYW5 571 aaPredicted RBP14.31□□□□□ -0.12
MDC1-209ENST00000613547 LRRC52Q8N7C0 313 aa14.31□□□□□ -0.12
MDC1-209ENST00000613547 MRPL43Q8N983 215 aaKnown RBP14.31□□□□□ -0.12
MDC1-209ENST00000613547 C1orf127Q8N9H9 656 aa14.31□□□□□ -0.12
MDC1-209ENST00000613547 C3orf58Q8NDZ4 430 aa14.31□□□□□ -0.12
MDC1-209ENST00000613547 OR5B17Q8NGF7 314 aa14.31□□□□□ -0.12
MDC1-209ENST00000613547 SUSD3Q96L08 255 aa14.31□□□□□ -0.12
MDC1-209ENST00000613547 POP1Q99575 1024 aaKnown RBP14.31□□□□□ -0.12
MDC1-209ENST00000613547 DUSP9Q99956 384 aaKnown RBP14.31□□□□□ -0.12
MDC1-209ENST00000613547 TTPALQ9BTX7 342 aa14.31□□□□□ -0.12
MDC1-209ENST00000613547 VN1R3Q9BXE9 311 aa14.31□□□□□ -0.12
MDC1-209ENST00000613547 GPR62Q9BZJ7 368 aa14.31□□□□□ -0.12
MDC1-209ENST00000613547 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.31□□□□□ -0.12
MDC1-209ENST00000613547 AGAP1Q9UPQ3 857 aa14.31□□□□□ -0.12
MDC1-209ENST00000613547 STXBP5LQ9Y2K9 1186 aa14.31□□□□□ -0.12
MDC1-209ENST00000613547 PTPRJQ12913 1337 aa14.31□□□□□ -0.12
MDC1-209ENST00000613547 NLRC5Q86WI3 1866 aa14.3□□□□□ -0.12
MDC1-209ENST00000613547 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.3□□□□□ -0.12
MDC1-209ENST00000613547 PIRO00625 290 aa14.3□□□□□ -0.12
MDC1-209ENST00000613547 C2CD2LO14523 706 aa14.3□□□□□ -0.12
MDC1-209ENST00000613547 SYN3O14994 580 aa14.3□□□□□ -0.12
MDC1-209ENST00000613547 EFEMP2O95967 443 aa14.3□□□□□ -0.12
MDC1-209ENST00000613547 CCDC192P0DO97 292 aa14.3□□□□□ -0.12
MDC1-209ENST00000613547 IRS1P35568 1242 aa14.3□□□□□ -0.12
MDC1-209ENST00000613547 BRCC3P46736 316 aa14.3□□□□□ -0.12
MDC1-209ENST00000613547 DSG1Q02413 1049 aa14.3□□□□□ -0.12
MDC1-209ENST00000613547 PTPN14Q15678 1187 aa14.3□□□□□ -0.12
MDC1-209ENST00000613547 TCERG1LQ5VWI1 586 aa14.3□□□□□ -0.12
MDC1-209ENST00000613547 APPL2Q8NEU8 664 aa14.3□□□□□ -0.12
MDC1-209ENST00000613547 RIN2Q8WYP3 895 aaPredicted RBP14.3□□□□□ -0.12
MDC1-209ENST00000613547 SRRTQ9BXP5 876 aaKnown RBP14.3□□□□□ -0.12
MDC1-209ENST00000613547 EMILIN2Q9BXX0 1053 aa14.3□□□□□ -0.12
MDC1-209ENST00000613547 NAT10Q9H0A0 1025 aaKnown RBP14.3□□□□□ -0.12
MDC1-209ENST00000613547 CHST7Q9NS84 486 aa14.3□□□□□ -0.12
MDC1-209ENST00000613547 IRAK3Q9Y616 596 aa14.3□□□□□ -0.12
MDC1-209ENST00000613547 KIAA1671Q9BY89 1806 aa14.29□□□□□ -0.12
MDC1-209ENST00000613547 TDRD15B5MCY1 1934 aaKnown RBP14.29□□□□□ -0.12
MDC1-209ENST00000613547 CITO14578 2027 aa14.29□□□□□ -0.12
MDC1-209ENST00000613547 C2orf71A6NGG8 1288 aa14.29□□□□□ -0.12
MDC1-209ENST00000613547 KPNA7A9QM74 516 aa14.29□□□□□ -0.12
MDC1-209ENST00000613547 I3L4J1 428 aa14.29□□□□□ -0.12
MDC1-209ENST00000613547 PPEF2O14830 753 aa14.29□□□□□ -0.12
MDC1-209ENST00000613547 NCK2O43639 380 aa14.29□□□□□ -0.12
MDC1-209ENST00000613547 CLSTN1O94985 981 aa14.29□□□□□ -0.12
MDC1-209ENST00000613547 ODC1P11926 461 aa14.29□□□□□ -0.12
MDC1-209ENST00000613547 FGFR3P22607 806 aa14.29□□□□□ -0.12
MDC1-209ENST00000613547 GTF2H1P32780 548 aa14.29□□□□□ -0.12
MDC1-209ENST00000613547 AARSP49588 968 aaKnown RBP eCLIP14.29□□□□□ -0.12
MDC1-209ENST00000613547 LILRA4P59901 499 aa14.29□□□□□ -0.12
MDC1-209ENST00000613547 DLG4P78352 724 aa14.29□□□□□ -0.12
MDC1-209ENST00000613547 NFKBIBQ15653 356 aa14.29□□□□□ -0.12
MDC1-209ENST00000613547 DCAF17Q5H9S7 520 aaPredicted RBP14.29□□□□□ -0.12
MDC1-209ENST00000613547 ANKS3Q6ZW76 656 aa14.29□□□□□ -0.12
MDC1-209ENST00000613547 TAS1R1Q7RTX1 841 aa14.29□□□□□ -0.12
MDC1-209ENST00000613547 FRMD5Q7Z6J6 570 aa14.29□□□□□ -0.12
MDC1-209ENST00000613547 FAM114A1Q8IWE2 563 aa14.29□□□□□ -0.12
MDC1-209ENST00000613547 PLEKHO2Q8TD55 490 aa14.29□□□□□ -0.12
MDC1-209ENST00000613547 AUTS2Q8WXX7 1259 aa14.29□□□□□ -0.12
MDC1-209ENST00000613547 PIK3R5Q8WYR1 880 aa14.29□□□□□ -0.12
MDC1-209ENST00000613547 CDCA3Q99618 268 aaPredicted RBP14.29□□□□□ -0.12
MDC1-209ENST00000613547 GZF1Q9H116 711 aaPredicted RBP14.29□□□□□ -0.12
MDC1-209ENST00000613547 TLE6Q9H808 572 aa14.29□□□□□ -0.12
MDC1-209ENST00000613547 PCDHB8Q9UN66 801 aa14.29□□□□□ -0.12
MDC1-209ENST00000613547 COL4A4P53420 1690 aaPredicted RBP14.29□□□□□ -0.12
MDC1-209ENST00000613547 H7C4K7 107 aa14.28□□□□□ -0.12
MDC1-209ENST00000613547 M0QZQ0 153 aa14.28□□□□□ -0.12
MDC1-209ENST00000613547 HUS1O60921 280 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms