RNA–Protein interactions for RNA: ENST00000613214.4

TNXB-209, Transcript of tenascin XB, humanhuman

TSL 5 BASIC

Gene TNXB, Length 6,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-209ENST00000613214 HMGB1P1B2RPK0 211 aaPredicted RBP16.22■□□□□ 0.19
TNXB-209ENST00000613214 TEX9Q8N6V9 391 aa16.22■□□□□ 0.19
TNXB-209ENST00000613214 UNKQ9C0B0 810 aaKnown RBP16.22■□□□□ 0.19
TNXB-209ENST00000613214 KIAA1586Q9HCI6 787 aa16.22■□□□□ 0.19
TNXB-209ENST00000613214 KRT7P08729 469 aa16.22■□□□□ 0.19
TNXB-209ENST00000613214 HPCAP84074 193 aa16.22■□□□□ 0.19
TNXB-209ENST00000613214 PLCL1Q15111 1095 aa16.22■□□□□ 0.19
TNXB-209ENST00000613214 TNIP3Q96KP6 325 aa16.22■□□□□ 0.19
TNXB-209ENST00000613214 OSBPL9Q96SU4 736 aa16.22■□□□□ 0.19
TNXB-209ENST00000613214 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.22■□□□□ 0.19
TNXB-209ENST00000613214 AP2B1P63010 937 aa16.22■□□□□ 0.19
TNXB-209ENST00000613214 DEUP1Q05D60 604 aa16.22■□□□□ 0.19
TNXB-209ENST00000613214 HORMAD1Q86X24 394 aa16.22■□□□□ 0.19
TNXB-209ENST00000613214 C4orf33Q8N1A6 199 aa16.22■□□□□ 0.19
TNXB-209ENST00000613214 CPB2Q96IY4 423 aa16.22■□□□□ 0.19
TNXB-209ENST00000613214 LY9Q9HBG7 655 aa16.22■□□□□ 0.19
TNXB-209ENST00000613214 AIM2O14862 343 aa16.22■□□□□ 0.19
TNXB-209ENST00000613214 TOMM20Q15388 145 aa16.22■□□□□ 0.19
TNXB-209ENST00000613214 ADCK1Q86TW2 530 aa16.22■□□□□ 0.19
TNXB-209ENST00000613214 KIAA2013Q8IYS2 634 aa16.22■□□□□ 0.19
TNXB-209ENST00000613214 MKL2Q9ULH7 1088 aa16.22■□□□□ 0.19
TNXB-209ENST00000613214 TRAPPC3O43617 180 aa16.22■□□□□ 0.19
TNXB-209ENST00000613214 MLH1P40692 756 aa16.22■□□□□ 0.19
TNXB-209ENST00000613214 PTPRHQ9HD43 1115 aa16.22■□□□□ 0.19
TNXB-209ENST00000613214 IQCA1LA6NCM1 817 aa16.22■□□□□ 0.19
TNXB-209ENST00000613214 ALDH1A2O94788 518 aa16.22■□□□□ 0.19
TNXB-209ENST00000613214 PDGFRAP16234 1089 aa16.22■□□□□ 0.19
TNXB-209ENST00000613214 TRPC1P48995 793 aa16.22■□□□□ 0.19
TNXB-209ENST00000613214 TMEM39BQ9GZU3 492 aa16.22■□□□□ 0.19
TNXB-209ENST00000613214 ASCC2Q9H1I8 757 aaPredicted RBP16.22■□□□□ 0.19
TNXB-209ENST00000613214 ATP11BQ9Y2G3 1177 aa16.22■□□□□ 0.19
TNXB-209ENST00000613214 CCDC151A5D8V7 595 aa16.21■□□□□ 0.19
TNXB-209ENST00000613214 STKLD1Q8NE28 680 aa16.21■□□□□ 0.19
TNXB-209ENST00000613214 DIS3LQ8TF46 1054 aaKnown RBP16.21■□□□□ 0.19
TNXB-209ENST00000613214 ASZ1Q8WWH4 475 aa16.21■□□□□ 0.19
TNXB-209ENST00000613214 PANX2Q96RD6 677 aa16.21■□□□□ 0.19
TNXB-209ENST00000613214 MYCBPQ99417 103 aaPredicted RBP16.21■□□□□ 0.19
TNXB-209ENST00000613214 METTL5Q9NRN9 209 aaKnown RBP16.21■□□□□ 0.19
TNXB-209ENST00000613214 PCDHA10Q9Y5I2 948 aa16.21■□□□□ 0.19
TNXB-209ENST00000613214 C3orf70A6NLC5 250 aaPredicted RBP16.21■□□□□ 0.19
TNXB-209ENST00000613214 CDH18Q13634 790 aa16.21■□□□□ 0.19
TNXB-209ENST00000613214 FAXCQ5TGI0 409 aa16.21■□□□□ 0.19
TNXB-209ENST00000613214 RHOT1Q8IXI2 618 aa16.21■□□□□ 0.19
TNXB-209ENST00000613214 TRIM51Q9BSJ1 452 aa16.21■□□□□ 0.19
TNXB-209ENST00000613214 ZNF556Q9HAH1 456 aa16.21■□□□□ 0.19
TNXB-209ENST00000613214 PLXNC1O60486 1568 aa16.21■□□□□ 0.19
TNXB-209ENST00000613214 ZC3H11AO75152 810 aaKnown RBP eCLIP16.21■□□□□ 0.19
TNXB-209ENST00000613214 MLNP12872 115 aa16.21■□□□□ 0.19
TNXB-209ENST00000613214 KRT4P19013 534 aa16.21■□□□□ 0.19
TNXB-209ENST00000613214 SFNP31947 248 aa16.21■□□□□ 0.19
TNXB-209ENST00000613214 ARMC2Q8NEN0 867 aa16.21■□□□□ 0.19
TNXB-209ENST00000613214 OSBPL1AQ9BXW6 950 aa16.21■□□□□ 0.19
TNXB-209ENST00000613214 NPHP4O75161 1426 aaPredicted RBP16.21■□□□□ 0.19
TNXB-209ENST00000613214 KHDRBS2Q5VWX1 349 aaKnown RBP16.21■□□□□ 0.19
TNXB-209ENST00000613214 SPACA7Q96KW9 195 aa16.21■□□□□ 0.19
TNXB-209ENST00000613214 SPON1Q9HCB6 807 aa16.21■□□□□ 0.19
TNXB-209ENST00000613214 PCDHB8Q9UN66 801 aa16.21■□□□□ 0.19
TNXB-209ENST00000613214 FAM135BQ49AJ0 1406 aa16.21■□□□□ 0.18
TNXB-209ENST00000613214 RAD23BP54727 409 aa16.21■□□□□ 0.18
TNXB-209ENST00000613214 SCUBE2Q9NQ36 999 aa16.21■□□□□ 0.18
TNXB-209ENST00000613214 TCP11X1B4DZS4 312 aa16.2■□□□□ 0.18
TNXB-209ENST00000613214 PTPN7P35236 360 aa16.2■□□□□ 0.18
TNXB-209ENST00000613214 HARS2P49590 506 aaKnown RBP16.2■□□□□ 0.18
TNXB-209ENST00000613214 MRPS15P82914 257 aaKnown RBP16.2■□□□□ 0.18
TNXB-209ENST00000613214 VPS50Q96JG6 964 aa16.2■□□□□ 0.18
TNXB-209ENST00000613214 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.2■□□□□ 0.18
TNXB-209ENST00000613214 SH3GLB2Q9NR46 395 aa16.2■□□□□ 0.18
TNXB-209ENST00000613214 CHMP2BQ9UQN3 213 aa16.2■□□□□ 0.18
TNXB-209ENST00000613214 PTPRTO14522 1441 aa16.2■□□□□ 0.18
TNXB-209ENST00000613214 IL10P22301 178 aa16.2■□□□□ 0.18
TNXB-209ENST00000613214 SNAPC2Q13487 334 aa16.2■□□□□ 0.18
TNXB-209ENST00000613214 SARM1Q6SZW1 724 aa16.2■□□□□ 0.18
TNXB-209ENST00000613214 OOSP2Q86WS3 158 aa16.2■□□□□ 0.18
TNXB-209ENST00000613214 ZNF555Q8NEP9 628 aa16.2■□□□□ 0.18
TNXB-209ENST00000613214 A8MX80 341 aa16.2■□□□□ 0.18
TNXB-209ENST00000613214 UBE2Q2LH0YL09 131 aa16.2■□□□□ 0.18
TNXB-209ENST00000613214 PSMD14O00487 310 aa16.2■□□□□ 0.18
TNXB-209ENST00000613214 PCNAP12004 261 aa16.2■□□□□ 0.18
TNXB-209ENST00000613214 ALDH7A1P49419 539 aaKnown RBP16.2■□□□□ 0.18
TNXB-209ENST00000613214 EIF3BP55884 814 aaKnown RBP16.2■□□□□ 0.18
TNXB-209ENST00000613214 TOB2Q14106 344 aaPredicted RBP16.2■□□□□ 0.18
TNXB-209ENST00000613214 GPR108Q9NPR9 543 aa16.2■□□□□ 0.18
TNXB-209ENST00000613214 PMPCBO75439 489 aa16.2■□□□□ 0.18
TNXB-209ENST00000613214 ATP1A1P05023 1023 aaKnown RBP16.2■□□□□ 0.18
TNXB-209ENST00000613214 IER5Q5VY09 327 aa16.2■□□□□ 0.18
TNXB-209ENST00000613214 PLD3Q8IV08 490 aa16.2■□□□□ 0.18
TNXB-209ENST00000613214 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.2■□□□□ 0.18
TNXB-209ENST00000613214 PLEKHF1Q96S99 279 aa16.2■□□□□ 0.18
TNXB-209ENST00000613214 MTIF3Q9H2K0 278 aaKnown RBP16.2■□□□□ 0.18
TNXB-209ENST00000613214 ASAP2O43150 1006 aa16.2■□□□□ 0.18
TNXB-209ENST00000613214 LZTS3O60299 673 aaPredicted RBP16.2■□□□□ 0.18
TNXB-209ENST00000613214 GALNTL6Q49A17 601 aa16.2■□□□□ 0.18
TNXB-209ENST00000613214 MIB1Q86YT6 1006 aa16.2■□□□□ 0.18
TNXB-209ENST00000613214 BLOC1S5Q8TDH9 187 aa16.2■□□□□ 0.18
TNXB-209ENST00000613214 DDX56Q9NY93 547 aaKnown RBP16.2■□□□□ 0.18
TNXB-209ENST00000613214 ITGB6P18564 788 aa16.19■□□□□ 0.18
TNXB-209ENST00000613214 PDXDC1Q6P996 788 aa16.19■□□□□ 0.18
TNXB-209ENST00000613214 FBXO38Q6PIJ6 1188 aa16.19■□□□□ 0.18
TNXB-209ENST00000613214 PPP1R13LQ8WUF5 828 aa16.19■□□□□ 0.18
TNXB-209ENST00000613214 ZKSCAN4Q969J2 545 aaPredicted RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms