RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 SLFN11Q7Z7L1 901 aa17.58■□□□□ 0.4
CNOT3-208ENST00000613073 FAM71AQ8IYT1 594 aa17.58■□□□□ 0.4
CNOT3-208ENST00000613073 TMC2Q8TDI7 906 aa17.58■□□□□ 0.4
CNOT3-208ENST00000613073 ZNF516Q92618 1163 aa17.58■□□□□ 0.4
CNOT3-208ENST00000613073 NT5C1BQ96P26 610 aa17.58■□□□□ 0.4
CNOT3-208ENST00000613073 ETAA1Q9NY74 926 aa17.58■□□□□ 0.4
CNOT3-208ENST00000613073 CPSF2Q9P2I0 782 aaKnown RBP17.58■□□□□ 0.4
CNOT3-208ENST00000613073 AMACRQ9UHK6 382 aa17.58■□□□□ 0.4
CNOT3-208ENST00000613073 IGKV6D-21A0A0A0MT36 114 aa17.57■□□□□ 0.4
CNOT3-208ENST00000613073 ANKRD62A6NC57 917 aa17.57■□□□□ 0.4
CNOT3-208ENST00000613073 CXCL11O14625 94 aa17.57■□□□□ 0.4
CNOT3-208ENST00000613073 SMNDC1O75940 238 aaKnown RBP eCLIP17.57■□□□□ 0.42e-6■■□□□ 12.7
CNOT3-208ENST00000613073 EDN1P05305 212 aa17.57■□□□□ 0.4
CNOT3-208ENST00000613073 VIMP08670 466 aaKnown RBP17.57■□□□□ 0.4
CNOT3-208ENST00000613073 CHN1P15882 459 aa17.57■□□□□ 0.4
CNOT3-208ENST00000613073 TNNI1P19237 187 aa17.57■□□□□ 0.4
CNOT3-208ENST00000613073 EPHX2P34913 555 aa17.57■□□□□ 0.4
CNOT3-208ENST00000613073 ERICH1Q86X53 443 aa17.57■□□□□ 0.4
CNOT3-208ENST00000613073 LRRC34Q8IZ02 419 aa17.57■□□□□ 0.4
CNOT3-208ENST00000613073 GLG1Q92896 1179 aa17.57■□□□□ 0.4
CNOT3-208ENST00000613073 CELF4Q9BZC1 486 aaKnown RBP17.57■□□□□ 0.4
CNOT3-208ENST00000613073 AGO2Q9UKV8 859 aaKnown RBP17.57■□□□□ 0.4
CNOT3-208ENST00000613073 ATP8A1Q9Y2Q0 1164 aa17.57■□□□□ 0.4
CNOT3-208ENST00000613073 DAAM1Q9Y4D1 1078 aa17.57■□□□□ 0.4
CNOT3-208ENST00000613073 LOC285556D6RIA3 1793 aa17.57■□□□□ 0.4
CNOT3-208ENST00000613073 ATMINO43313 823 aaPredicted RBP17.57■□□□□ 0.4
CNOT3-208ENST00000613073 CAND2O75155 1236 aa17.57■□□□□ 0.4
CNOT3-208ENST00000613073 CHRNB2P17787 502 aa17.57■□□□□ 0.4
CNOT3-208ENST00000613073 GPC3P51654 580 aa17.57■□□□□ 0.4
CNOT3-208ENST00000613073 TRIM68Q6AZZ1 485 aa17.57■□□□□ 0.4
CNOT3-208ENST00000613073 DPY19L2Q6NUT2 758 aa17.57■□□□□ 0.4
CNOT3-208ENST00000613073 SYCE1Q8N0S2 351 aa17.57■□□□□ 0.4
CNOT3-208ENST00000613073 CCDC26Q8TAB7 109 aa17.57■□□□□ 0.4
CNOT3-208ENST00000613073 MAF1Q9H063 256 aa17.57■□□□□ 0.4
CNOT3-208ENST00000613073 STXBP5LQ9Y2K9 1186 aa17.57■□□□□ 0.4
CNOT3-208ENST00000613073 COQ4Q9Y3A0 265 aa17.57■□□□□ 0.4
CNOT3-208ENST00000613073 NCANO14594 1321 aa17.57■□□□□ 0.4
CNOT3-208ENST00000613073 PMM2O15305 246 aa17.57■□□□□ 0.4
CNOT3-208ENST00000613073 SART1O43290 800 aaKnown RBP17.57■□□□□ 0.4
CNOT3-208ENST00000613073 KRT5P13647 590 aa17.57■□□□□ 0.4
CNOT3-208ENST00000613073 ARL2P36404 184 aa17.57■□□□□ 0.4
CNOT3-208ENST00000613073 NAMPTP43490 491 aa17.57■□□□□ 0.4
CNOT3-208ENST00000613073 ARMC3Q5W041 872 aa17.57■□□□□ 0.4
CNOT3-208ENST00000613073 ARMC9Q7Z3E5 817 aa17.57■□□□□ 0.4
CNOT3-208ENST00000613073 USP37Q86T82 979 aa17.57■□□□□ 0.4
CNOT3-208ENST00000613073 FBXO16Q8IX29 292 aaPredicted RBP17.57■□□□□ 0.4
CNOT3-208ENST00000613073 UHMK1Q8TAS1 419 aaKnown RBP17.57■□□□□ 0.4
CNOT3-208ENST00000613073 SEPT1Q8WYJ6 367 aa17.57■□□□□ 0.4
CNOT3-208ENST00000613073 SHC3Q92529 594 aa17.57■□□□□ 0.4
CNOT3-208ENST00000613073 FNBP1Q96RU3 617 aa17.57■□□□□ 0.4
CNOT3-208ENST00000613073 NIFKQ9BYG3 293 aaKnown RBP17.57■□□□□ 0.4
CNOT3-208ENST00000613073 NRBP2Q9NSY0 501 aa17.57■□□□□ 0.4
CNOT3-208ENST00000613073 CTTNBP2NLQ9P2B4 639 aa17.57■□□□□ 0.4
CNOT3-208ENST00000613073 NOCTQ9UK39 431 aaKnown RBP17.57■□□□□ 0.4
CNOT3-208ENST00000613073 AMFRQ9UKV5 643 aa17.57■□□□□ 0.4
CNOT3-208ENST00000613073 PAPPA2Q9BXP8 1791 aa17.56■□□□□ 0.4
CNOT3-208ENST00000613073 TMEM110-MUSTN1A8MSY1 372 aa17.56■□□□□ 0.4
CNOT3-208ENST00000613073 EXTL3O43909 919 aa17.56■□□□□ 0.4
CNOT3-208ENST00000613073 CLSTN1O94985 981 aa17.56■□□□□ 0.4
CNOT3-208ENST00000613073 ITGA4P13612 1032 aa17.56■□□□□ 0.4
CNOT3-208ENST00000613073 METTL7BQ6UX53 244 aa17.56■□□□□ 0.4
CNOT3-208ENST00000613073 L3MBTL3Q96JM7 780 aaPredicted RBP17.56■□□□□ 0.4
CNOT3-208ENST00000613073 ZNF668Q96K58 619 aaPredicted RBP17.56■□□□□ 0.4
CNOT3-208ENST00000613073 PBKQ96KB5 322 aa17.56■□□□□ 0.4
CNOT3-208ENST00000613073 FGD4Q96M96 766 aa17.56■□□□□ 0.4
CNOT3-208ENST00000613073 SUCLA2Q9P2R7 463 aaPredicted RBP17.56■□□□□ 0.4
CNOT3-208ENST00000613073 SLC12A4Q9UP95 1085 aa17.56■□□□□ 0.4
CNOT3-208ENST00000613073 TTLL13PA6NNM8 815 aa17.56■□□□□ 0.4
CNOT3-208ENST00000613073 H0YCG3 227 aa17.56■□□□□ 0.4
CNOT3-208ENST00000613073 UBOX5O94941 541 aa17.56■□□□□ 0.4
CNOT3-208ENST00000613073 PAEPP09466 180 aa17.56■□□□□ 0.4
CNOT3-208ENST00000613073 KCTD2Q14681 263 aa17.56■□□□□ 0.4
CNOT3-208ENST00000613073 NBPF20Q3BBV1 942 aa17.56■□□□□ 0.4
CNOT3-208ENST00000613073 ERMARDQ5T6L9 678 aa17.56■□□□□ 0.4
CNOT3-208ENST00000613073 COPS5Q92905 334 aa17.56■□□□□ 0.4
CNOT3-208ENST00000613073 MMP19Q99542 508 aa17.56■□□□□ 0.4
CNOT3-208ENST00000613073 AZI2Q9H6S1 392 aa17.56■□□□□ 0.4
CNOT3-208ENST00000613073 PTPRJQ12913 1337 aa17.55■□□□□ 0.4
CNOT3-208ENST00000613073 NOP56O00567 594 aaKnown RBP17.55■□□□□ 0.4
CNOT3-208ENST00000613073 SOCS7O14512 581 aa17.55■□□□□ 0.4
CNOT3-208ENST00000613073 CYP2C8P10632 490 aa17.55■□□□□ 0.4
CNOT3-208ENST00000613073 CYP11B1P15538 503 aa17.55■□□□□ 0.4
CNOT3-208ENST00000613073 MOGSQ13724 837 aa17.55■□□□□ 0.4
CNOT3-208ENST00000613073 CAPSQ13938 189 aa17.55■□□□□ 0.4
CNOT3-208ENST00000613073 FAM160B1Q5W0V3 765 aa17.55■□□□□ 0.4
CNOT3-208ENST00000613073 PRPF31Q8WWY3 499 aaKnown RBP17.55■□□□□ 0.4
CNOT3-208ENST00000613073 PSPC1Q8WXF1 523 aaKnown RBP17.55■□□□□ 0.4
CNOT3-208ENST00000613073 HES6Q96HZ4 224 aa17.55■□□□□ 0.4
CNOT3-208ENST00000613073 FAM129AQ9BZQ8 928 aa17.55■□□□□ 0.4
CNOT3-208ENST00000613073 CCDC113Q9H0I3 377 aa17.55■□□□□ 0.4
CNOT3-208ENST00000613073 ZNF408Q9H9D4 720 aa17.55■□□□□ 0.4
CNOT3-208ENST00000613073 NOC2LQ9Y3T9 749 aaKnown RBP17.55■□□□□ 0.4
CNOT3-208ENST00000613073 MCM3APO60318 1980 aa17.55■□□□□ 0.4
CNOT3-208ENST00000613073 A0A0G2JMZ2 1700 aa17.55■□□□□ 0.4
CNOT3-208ENST00000613073 ATP8B3O60423 1300 aa17.55■□□□□ 0.4
CNOT3-208ENST00000613073 SHBGP04278 402 aa17.55■□□□□ 0.4
CNOT3-208ENST00000613073 ZBTB48P10074 688 aaPredicted RBP17.55■□□□□ 0.4
CNOT3-208ENST00000613073 PPIL2Q13356 520 aa17.55■□□□□ 0.4
CNOT3-208ENST00000613073 RBBP5Q15291 538 aaKnown RBP17.55■□□□□ 0.4
CNOT3-208ENST00000613073 TARBP2Q15633 366 aaKnown RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms