RNA–Protein interactions for RNA: ENST00000612828.4

CNTNAP3B-211, Transcript of contactin associated protein like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 7,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-211ENST00000612828 SRP54P61011 504 aaKnown RBP11.35□□□□□ -0.59
CNTNAP3B-211ENST00000612828 PAK1Q13153 545 aa11.35□□□□□ -0.59
CNTNAP3B-211ENST00000612828 UTS2BQ765I0 119 aa11.35□□□□□ -0.59
CNTNAP3B-211ENST00000612828 MYOCDQ8IZQ8 938 aa11.35□□□□□ -0.59
CNTNAP3B-211ENST00000612828 DNAAF1Q8NEP3 725 aa11.35□□□□□ -0.59
CNTNAP3B-211ENST00000612828 GATAD2BQ8WXI9 593 aa11.35□□□□□ -0.59
CNTNAP3B-211ENST00000612828 HEXIM2Q96MH2 286 aaKnown RBP11.35□□□□□ -0.59
CNTNAP3B-211ENST00000612828 CCDC115Q96NT0 180 aa11.35□□□□□ -0.59
CNTNAP3B-211ENST00000612828 CCSER2Q9H7U1 834 aa11.35□□□□□ -0.59
CNTNAP3B-211ENST00000612828 MAGEA13PA6NCF6 341 aa11.35□□□□□ -0.59
CNTNAP3B-211ENST00000612828 SLC33A1O00400 549 aaPredicted RBP11.35□□□□□ -0.59
CNTNAP3B-211ENST00000612828 KMOO15229 486 aa11.35□□□□□ -0.59
CNTNAP3B-211ENST00000612828 PSAPP07602 524 aa11.35□□□□□ -0.59
CNTNAP3B-211ENST00000612828 KRT16P08779 473 aa11.35□□□□□ -0.59
CNTNAP3B-211ENST00000612828 CD58P19256 250 aa11.35□□□□□ -0.59
CNTNAP3B-211ENST00000612828 ADORA1P30542 326 aa11.35□□□□□ -0.59
CNTNAP3B-211ENST00000612828 HSD17B2P37059 387 aa11.35□□□□□ -0.59
CNTNAP3B-211ENST00000612828 NFKB2Q00653 900 aa11.35□□□□□ -0.59
CNTNAP3B-211ENST00000612828 SYCE1Q8N0S2 351 aa11.35□□□□□ -0.59
CNTNAP3B-211ENST00000612828 GRK7Q8WTQ7 553 aa11.35□□□□□ -0.59
CNTNAP3B-211ENST00000612828 RNFT2Q96EX2 444 aa11.35□□□□□ -0.59
CNTNAP3B-211ENST00000612828 C17orf80Q9BSJ5 609 aa11.35□□□□□ -0.59
CNTNAP3B-211ENST00000612828 GPBP1L1Q9HC44 474 aaPredicted RBP11.35□□□□□ -0.59
CNTNAP3B-211ENST00000612828 PPP1R14DQ9NXH3 145 aa11.35□□□□□ -0.59
CNTNAP3B-211ENST00000612828 MTMR4Q9NYA4 1195 aa11.35□□□□□ -0.59
CNTNAP3B-211ENST00000612828 USP27XA6NNY8 438 aa11.35□□□□□ -0.59
CNTNAP3B-211ENST00000612828 FAM200BP0CF97 657 aa11.35□□□□□ -0.59
CNTNAP3B-211ENST00000612828 CMA1P23946 247 aa11.35□□□□□ -0.59
CNTNAP3B-211ENST00000612828 AVL9Q8NBF6 648 aa11.35□□□□□ -0.59
CNTNAP3B-211ENST00000612828 MNTQ99583 582 aa11.35□□□□□ -0.59
CNTNAP3B-211ENST00000612828 TBCDQ9BTW9 1192 aa11.35□□□□□ -0.59
CNTNAP3B-211ENST00000612828 RTL9Q8NET4 1388 aa11.35□□□□□ -0.59
CNTNAP3B-211ENST00000612828 OPLAHO14841 1288 aa11.35□□□□□ -0.59
CNTNAP3B-211ENST00000612828 SCAMP1O15126 338 aa11.35□□□□□ -0.59
CNTNAP3B-211ENST00000612828 TIMM44O43615 452 aa11.35□□□□□ -0.59
CNTNAP3B-211ENST00000612828 CHP2O43745 196 aa11.35□□□□□ -0.59
CNTNAP3B-211ENST00000612828 UFL1O94874 794 aa11.35□□□□□ -0.59
CNTNAP3B-211ENST00000612828 CLK1P49759 484 aaKnown RBP11.35□□□□□ -0.59
CNTNAP3B-211ENST00000612828 SMYD4Q8IYR2 804 aaPredicted RBP11.35□□□□□ -0.59
CNTNAP3B-211ENST00000612828 ANKRD13CQ8N6S4 541 aa11.35□□□□□ -0.59
CNTNAP3B-211ENST00000612828 CCNYL1Q8N7R7 359 aa11.35□□□□□ -0.59
CNTNAP3B-211ENST00000612828 C19orf18Q8NEA5 215 aa11.35□□□□□ -0.59
CNTNAP3B-211ENST00000612828 RAD21L1Q9H4I0 556 aa11.35□□□□□ -0.59
CNTNAP3B-211ENST00000612828 CAB39LQ9H9S4 337 aa11.35□□□□□ -0.59
CNTNAP3B-211ENST00000612828 GID8Q9NWU2 228 aa11.35□□□□□ -0.59
CNTNAP3B-211ENST00000612828 HSPBP1Q9NZL4 362 aa11.35□□□□□ -0.59
CNTNAP3B-211ENST00000612828 NUP50Q9UKX7 468 aa11.35□□□□□ -0.59
CNTNAP3B-211ENST00000612828 TRPM2O94759 1503 aa11.35□□□□□ -0.59
CNTNAP3B-211ENST00000612828 HMOX2P30519 316 aa11.34□□□□□ -0.59
CNTNAP3B-211ENST00000612828 CHRNA3P32297 505 aa11.34□□□□□ -0.59
CNTNAP3B-211ENST00000612828 SARSP49591 514 aaKnown RBP11.34□□□□□ -0.59
CNTNAP3B-211ENST00000612828 KPNA2P52292 529 aaKnown RBP11.34□□□□□ -0.59
CNTNAP3B-211ENST00000612828 GYS2P54840 703 aa11.34□□□□□ -0.59
CNTNAP3B-211ENST00000612828 CDH11P55287 796 aa11.34□□□□□ -0.59
CNTNAP3B-211ENST00000612828 ZNF274Q96GC6 653 aaPredicted RBP11.34□□□□□ -0.59
CNTNAP3B-211ENST00000612828 RBM17Q96I25 401 aaKnown RBP11.34□□□□□ -0.59
CNTNAP3B-211ENST00000612828 TNKS2Q9H2K2 1166 aa11.34□□□□□ -0.59
CNTNAP3B-211ENST00000612828 FAM207AQ9NSI2 230 aaPredicted RBP11.34□□□□□ -0.59
CNTNAP3B-211ENST00000612828 SHOC2Q9UQ13 582 aa11.34□□□□□ -0.59
CNTNAP3B-211ENST00000612828 C2CD2LO14523 706 aa11.34□□□□□ -0.59
CNTNAP3B-211ENST00000612828 ECE2O60344 883 aa11.34□□□□□ -0.59
CNTNAP3B-211ENST00000612828 MOCS2O96007 188 aaPredicted RBP11.34□□□□□ -0.59
CNTNAP3B-211ENST00000612828 UMPSP11172 480 aa11.34□□□□□ -0.59
CNTNAP3B-211ENST00000612828 WEE1P30291 646 aa11.34□□□□□ -0.59
CNTNAP3B-211ENST00000612828 HSPA9P38646 679 aaKnown RBP11.34□□□□□ -0.59
CNTNAP3B-211ENST00000612828 CRLF3Q8IUI8 442 aa11.34□□□□□ -0.59
CNTNAP3B-211ENST00000612828 DTNBP1Q96EV8 351 aa11.34□□□□□ -0.59
CNTNAP3B-211ENST00000612828 TMEM68Q96MH6 324 aa11.34□□□□□ -0.59
CNTNAP3B-211ENST00000612828 RIOK2Q9BVS4 552 aaKnown RBP11.34□□□□□ -0.59
CNTNAP3B-211ENST00000612828 DBIP07108 87 aaKnown RBP11.34□□□□□ -0.59
CNTNAP3B-211ENST00000612828 CHI3L1P36222 383 aaPredicted RBP11.34□□□□□ -0.59
CNTNAP3B-211ENST00000612828 MTTPP55157 894 aa11.34□□□□□ -0.59
CNTNAP3B-211ENST00000612828 CYP4X1Q8N118 509 aa11.34□□□□□ -0.59
CNTNAP3B-211ENST00000612828 SCAIQ8N9R8 606 aa11.34□□□□□ -0.59
CNTNAP3B-211ENST00000612828 KIF28PB7ZC32 967 aa11.34□□□□□ -0.59
CNTNAP3B-211ENST00000612828 HMBSP08397 361 aa11.34□□□□□ -0.59
CNTNAP3B-211ENST00000612828 PPP2R1BP30154 601 aa11.34□□□□□ -0.59
CNTNAP3B-211ENST00000612828 ORC2Q13416 577 aaPredicted RBP11.34□□□□□ -0.59
CNTNAP3B-211ENST00000612828 MESDQ14696 234 aa11.34□□□□□ -0.59
CNTNAP3B-211ENST00000612828 NECTIN1Q15223 517 aa11.34□□□□□ -0.59
CNTNAP3B-211ENST00000612828 FAM45BPQ6NSW5 357 aa11.34□□□□□ -0.59
CNTNAP3B-211ENST00000612828 IRGCQ6NXR0 463 aa11.34□□□□□ -0.59
CNTNAP3B-211ENST00000612828 ADD3Q9UEY8 706 aaKnown RBP11.34□□□□□ -0.59
CNTNAP3B-211ENST00000612828 MAD2L2Q9UI95 211 aa11.34□□□□□ -0.59
CNTNAP3B-211ENST00000612828 ANKRD6Q9Y2G4 727 aa11.34□□□□□ -0.59
CNTNAP3B-211ENST00000612828 ADCY9O60503 1353 aa11.34□□□□□ -0.59
CNTNAP3B-211ENST00000612828 TBC1D4O60343 1298 aa11.34□□□□□ -0.59
CNTNAP3B-211ENST00000612828 OR6A2O95222 327 aa11.34□□□□□ -0.59
CNTNAP3B-211ENST00000612828 COPS2P61201 443 aa11.34□□□□□ -0.59
CNTNAP3B-211ENST00000612828 TPTE2Q6XPS3 522 aa11.34□□□□□ -0.59
CNTNAP3B-211ENST00000612828 RRAGAQ7L523 313 aa11.34□□□□□ -0.59
CNTNAP3B-211ENST00000612828 CALML6Q8TD86 181 aa11.34□□□□□ -0.59
CNTNAP3B-211ENST00000612828 PSD3Q9NYI0 1048 aa11.34□□□□□ -0.59
CNTNAP3B-211ENST00000612828 CCDC151A5D8V7 595 aa11.34□□□□□ -0.59
CNTNAP3B-211ENST00000612828 SRGAP2O75044 1071 aa11.34□□□□□ -0.59
CNTNAP3B-211ENST00000612828 HSMCR30P0CW71 290 aa11.34□□□□□ -0.59
CNTNAP3B-211ENST00000612828 MORC3Q14149 939 aa11.34□□□□□ -0.59
CNTNAP3B-211ENST00000612828 NKX1-1Q15270 411 aaPredicted RBP11.34□□□□□ -0.59
CNTNAP3B-211ENST00000612828 NELFBQ8WX92 580 aa11.34□□□□□ -0.59
CNTNAP3B-211ENST00000612828 EPC1Q9H2F5 836 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms