RNA–Protein interactions for RNA: ENST00000611963.4

TARDBP-213, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-213ENST00000611963 FAAP100Q0VG06 881 aa8.72□□□□□ -1.01
TARDBP-213ENST00000611963 NCOA4Q13772 614 aa8.72□□□□□ -1.01
TARDBP-213ENST00000611963 SURF1Q15526 300 aa8.72□□□□□ -1.01
TARDBP-213ENST00000611963 SLC10A6Q3KNW5 377 aa8.72□□□□□ -1.01
TARDBP-213ENST00000611963 LRIT3Q3SXY7 679 aa8.72□□□□□ -1.01
TARDBP-213ENST00000611963 TDRD12Q587J7 1177 aaKnown RBP8.72□□□□□ -1.01
TARDBP-213ENST00000611963 UBXN11Q5T124 520 aa8.72□□□□□ -1.01
TARDBP-213ENST00000611963 HGSNATQ68CP4 663 aa8.72□□□□□ -1.01
TARDBP-213ENST00000611963 JADE1Q6IE81 842 aa8.72□□□□□ -1.01
TARDBP-213ENST00000611963 ANKRD33Q7Z3H0 272 aa8.72□□□□□ -1.01
TARDBP-213ENST00000611963 RPAINQ86UA6 219 aa8.72□□□□□ -1.01
TARDBP-213ENST00000611963 WDR49Q8IV35 697 aa8.72□□□□□ -1.01
TARDBP-213ENST00000611963 SLC43A3Q8NBI5 491 aa8.72□□□□□ -1.01
TARDBP-213ENST00000611963 ATRIPQ8WXE1 791 aa8.72□□□□□ -1.01
TARDBP-213ENST00000611963 SYN2Q92777 582 aaPredicted RBP8.72□□□□□ -1.01
TARDBP-213ENST00000611963 PPP1R13BQ96KQ4 1090 aa8.72□□□□□ -1.01
TARDBP-213ENST00000611963 KREMEN1Q96MU8 473 aa8.72□□□□□ -1.01
TARDBP-213ENST00000611963 NT5C1BQ96P26 610 aa8.72□□□□□ -1.01
TARDBP-213ENST00000611963 ACAP3Q96P50 834 aa8.72□□□□□ -1.01
TARDBP-213ENST00000611963 CCDC94Q9BW85 323 aaPredicted RBP8.72□□□□□ -1.01
TARDBP-213ENST00000611963 STK33Q9BYT3 514 aa8.72□□□□□ -1.01
TARDBP-213ENST00000611963 GPR88Q9GZN0 384 aa8.72□□□□□ -1.01
TARDBP-213ENST00000611963 CXCL16Q9H2A7 254 aa8.72□□□□□ -1.01
TARDBP-213ENST00000611963 NHEJ1Q9H9Q4 299 aaPredicted RBP8.72□□□□□ -1.01
TARDBP-213ENST00000611963 APOBEC3GQ9HC16 384 aaKnown RBP8.72□□□□□ -1.01
TARDBP-213ENST00000611963 PRDM5Q9NQX1 630 aaPredicted RBP8.72□□□□□ -1.01
TARDBP-213ENST00000611963 SPTLC3Q9NUV7 552 aa8.72□□□□□ -1.01
TARDBP-213ENST00000611963 RNF19AQ9NV58 838 aa8.72□□□□□ -1.01
TARDBP-213ENST00000611963 ARHGAP20Q9P2F6 1191 aa8.72□□□□□ -1.01
TARDBP-213ENST00000611963 FBXL5Q9UKA1 691 aa8.72□□□□□ -1.01
TARDBP-213ENST00000611963 ST3GAL5Q9UNP4 418 aa8.72□□□□□ -1.01
TARDBP-213ENST00000611963 PLAGL2Q9UPG8 496 aa8.72□□□□□ -1.01
TARDBP-213ENST00000611963 PPP2R2CQ9Y2T4 447 aa8.72□□□□□ -1.01
TARDBP-213ENST00000611963 HES2Q9Y543 173 aa8.72□□□□□ -1.01
TARDBP-213ENST00000611963 ADGRG1Q9Y653 693 aa8.72□□□□□ -1.01
TARDBP-213ENST00000611963 UMODL1Q5DID0 1318 aa8.72□□□□□ -1.01
TARDBP-213ENST00000611963 TANC1Q9C0D5 1861 aa8.71□□□□□ -1.01
TARDBP-213ENST00000611963 FOXN3O00409 490 aaPredicted RBP8.71□□□□□ -1.02
TARDBP-213ENST00000611963 KIAA0355O15063 1070 aa8.71□□□□□ -1.02
TARDBP-213ENST00000611963 RECQL4O94761 1208 aa8.71□□□□□ -1.02
TARDBP-213ENST00000611963 NDUFA10O95299 355 aa8.71□□□□□ -1.02
TARDBP-213ENST00000611963 TNNC2P02585 160 aa8.71□□□□□ -1.02
TARDBP-213ENST00000611963 SERPING1P05155 500 aa8.71□□□□□ -1.02
TARDBP-213ENST00000611963 CLTBP09497 229 aa8.71□□□□□ -1.02
TARDBP-213ENST00000611963 AKAP5P24588 427 aa8.71□□□□□ -1.02
TARDBP-213ENST00000611963 CD52P31358 61 aa8.71□□□□□ -1.02
TARDBP-213ENST00000611963 SOX5P35711 763 aa8.71□□□□□ -1.02
TARDBP-213ENST00000611963 STAT1P42224 750 aa8.71□□□□□ -1.02
TARDBP-213ENST00000611963 EPHB4P54760 987 aa8.71□□□□□ -1.02
TARDBP-213ENST00000611963 CDK17Q00537 523 aa8.71□□□□□ -1.02
TARDBP-213ENST00000611963 KLHL30Q0D2K2 578 aa8.71□□□□□ -1.02
TARDBP-213ENST00000611963 NFX1Q12986 1120 aaKnown RBP8.71□□□□□ -1.02
TARDBP-213ENST00000611963 LPIN1Q14693 890 aa8.71□□□□□ -1.02
TARDBP-213ENST00000611963 TMEM132DQ14C87 1099 aa8.71□□□□□ -1.02
TARDBP-213ENST00000611963 PCBP1Q15365 356 aaKnown RBP eCLIP8.71□□□□□ -1.02
TARDBP-213ENST00000611963 KYAT1Q16773 422 aa8.71□□□□□ -1.02
TARDBP-213ENST00000611963 DUOXA2Q1HG44 320 aa8.71□□□□□ -1.02
TARDBP-213ENST00000611963 FBXO47Q5MNV8 452 aa8.71□□□□□ -1.02
TARDBP-213ENST00000611963 ZNF618Q5T7W0 954 aa8.71□□□□□ -1.02
TARDBP-213ENST00000611963 TWF2Q6IBS0 349 aaKnown RBP8.71□□□□□ -1.02
TARDBP-213ENST00000611963 TRAPPC11Q7Z392 1133 aa8.71□□□□□ -1.02
TARDBP-213ENST00000611963 IRF2BP2Q7Z5L9 587 aa8.71□□□□□ -1.02
TARDBP-213ENST00000611963 APBB1IPQ7Z5R6 666 aaPredicted RBP8.71□□□□□ -1.02
TARDBP-213ENST00000611963 REXO1L1PQ8IX06 675 aa8.71□□□□□ -1.02
TARDBP-213ENST00000611963 PPM1KQ8N3J5 372 aa8.71□□□□□ -1.02
TARDBP-213ENST00000611963 HELQQ8TDG4 1101 aa8.71□□□□□ -1.02
TARDBP-213ENST00000611963 BADQ92934 168 aa8.71□□□□□ -1.02
TARDBP-213ENST00000611963 ANKRD36BP1Q96IX9 119 aa8.71□□□□□ -1.02
TARDBP-213ENST00000611963 SNX27Q96L92 541 aa8.71□□□□□ -1.02
TARDBP-213ENST00000611963 TOX2Q96NM4 488 aa8.71□□□□□ -1.02
TARDBP-213ENST00000611963 LBHD1Q9BQE6 289 aaPredicted RBP8.71□□□□□ -1.02
TARDBP-213ENST00000611963 TRIM6Q9C030 488 aaPredicted RBP8.71□□□□□ -1.02
TARDBP-213ENST00000611963 NUCKS1Q9H1E3 243 aaKnown RBP8.71□□□□□ -1.02
TARDBP-213ENST00000611963 AGO3Q9H9G7 860 aaKnown RBP8.71□□□□□ -1.02
TARDBP-213ENST00000611963 ERVK-5Q9HDB9 667 aa8.71□□□□□ -1.02
TARDBP-213ENST00000611963 NPDC1Q9NQX5 325 aaPredicted RBP8.71□□□□□ -1.02
TARDBP-213ENST00000611963 C1orf112Q9NSG2 853 aa8.71□□□□□ -1.02
TARDBP-213ENST00000611963 AIPL1Q9NZN9 384 aa8.71□□□□□ -1.02
TARDBP-213ENST00000611963 SIX4Q9UIU6 781 aa8.71□□□□□ -1.02
TARDBP-213ENST00000611963 TBX21Q9UL17 535 aa8.71□□□□□ -1.02
TARDBP-213ENST00000611963 MYO6Q9UM54 1294 aa8.71□□□□□ -1.02
TARDBP-213ENST00000611963 REXO2Q9Y3B8 237 aaKnown RBP8.71□□□□□ -1.02
TARDBP-213ENST00000611963 EPN1Q9Y6I3 576 aaPredicted RBP8.71□□□□□ -1.02
TARDBP-213ENST00000611963 MGEA5O60502 916 aa8.7□□□□□ -1.02
TARDBP-213ENST00000611963 CST3P01034 146 aaPredicted RBP8.7□□□□□ -1.02
TARDBP-213ENST00000611963 RPLP2P05387 115 aaKnown RBP8.7□□□□□ -1.02
TARDBP-213ENST00000611963 CKBP12277 381 aa8.7□□□□□ -1.02
TARDBP-213ENST00000611963 IBSPP21815 317 aaPredicted RBP8.7□□□□□ -1.02
TARDBP-213ENST00000611963 RFX1P22670 979 aa8.7□□□□□ -1.02
TARDBP-213ENST00000611963 CYLC1P35663 651 aaPredicted RBP8.7□□□□□ -1.02
TARDBP-213ENST00000611963 USP8P40818 1118 aa8.7□□□□□ -1.02
TARDBP-213ENST00000611963 KIF11P52732 1056 aa8.7□□□□□ -1.02
TARDBP-213ENST00000611963 AP3M2P53677 418 aa8.7□□□□□ -1.02
TARDBP-213ENST00000611963 MYL6P60660 151 aa8.7□□□□□ -1.02
TARDBP-213ENST00000611963 NOP14P78316 857 aaKnown RBP8.7□□□□□ -1.02
TARDBP-213ENST00000611963 CYP27A1Q02318 531 aa8.7□□□□□ -1.02
TARDBP-213ENST00000611963 PAK2Q13177 524 aa8.7□□□□□ -1.02
TARDBP-213ENST00000611963 TRPC3Q13507 836 aa8.7□□□□□ -1.02
TARDBP-213ENST00000611963 WDR44Q5JSH3 913 aa8.7□□□□□ -1.02
TARDBP-213ENST00000611963 FAM26DQ5JW98 314 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms