RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 VSIG10LQ86VR7 867 aa13.91□□□□□ -0.18
TCF3-220ENST00000611869 ANKMY2Q8IV38 441 aa13.91□□□□□ -0.18
TCF3-220ENST00000611869 CCDC60Q8IWA6 550 aaPredicted RBP13.91□□□□□ -0.18
TCF3-220ENST00000611869 ATP8B4Q8TF62 1192 aa13.91□□□□□ -0.18
TCF3-220ENST00000611869 ARHGEF26Q96DR7 871 aa13.91□□□□□ -0.18
TCF3-220ENST00000611869 RBM15Q96T37 977 aaKnown RBP eCLIP13.91□□□□□ -0.181e-6■■□□□ 14.1
TCF3-220ENST00000611869 KLC2Q9H0B6 622 aa13.91□□□□□ -0.18
TCF3-220ENST00000611869 ABT1Q9ULW3 272 aaKnown RBP13.91□□□□□ -0.18
TCF3-220ENST00000611869 LRP6O75581 1613 aa13.91□□□□□ -0.18
TCF3-220ENST00000611869 ARPP19P56211 112 aa13.91□□□□□ -0.18
TCF3-220ENST00000611869 RBP5P82980 135 aa13.91□□□□□ -0.18
TCF3-220ENST00000611869 BYSLQ13895 437 aaKnown RBP13.91□□□□□ -0.18
TCF3-220ENST00000611869 SPOUT1Q5T280 376 aaKnown RBP13.91□□□□□ -0.18
TCF3-220ENST00000611869 SDCCAG8Q86SQ7 713 aaPredicted RBP13.91□□□□□ -0.18
TCF3-220ENST00000611869 GPRC5AQ8NFJ5 357 aa13.91□□□□□ -0.18
TCF3-220ENST00000611869 FEZF2Q8TBJ5 459 aa13.91□□□□□ -0.18
TCF3-220ENST00000611869 PPP4R1Q8TF05 950 aa13.91□□□□□ -0.18
TCF3-220ENST00000611869 TRAIPQ9BWF2 469 aa13.91□□□□□ -0.18
TCF3-220ENST00000611869 PRMT7Q9NVM4 692 aaPredicted RBP13.91□□□□□ -0.18
TCF3-220ENST00000611869 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.91□□□□□ -0.18
TCF3-220ENST00000611869 M0R2N6 131 aa13.9□□□□□ -0.18
TCF3-220ENST00000611869 EIF3HO15372 352 aaKnown RBP eCLIP13.9□□□□□ -0.18
TCF3-220ENST00000611869 MAGEB2O15479 319 aa13.9□□□□□ -0.18
TCF3-220ENST00000611869 TOM1L1O75674 476 aa13.9□□□□□ -0.18
TCF3-220ENST00000611869 ITGB3P05106 788 aa13.9□□□□□ -0.18
TCF3-220ENST00000611869 PDGFRBP09619 1106 aa13.9□□□□□ -0.18
TCF3-220ENST00000611869 ZNF677Q86XU0 584 aa13.9□□□□□ -0.18
TCF3-220ENST00000611869 RCOR2Q8IZ40 523 aa13.9□□□□□ -0.18
TCF3-220ENST00000611869 ABI1Q8IZP0 508 aa13.9□□□□□ -0.18
TCF3-220ENST00000611869 UBA3Q8TBC4 463 aa13.9□□□□□ -0.18
TCF3-220ENST00000611869 FBXO25Q8TCJ0 367 aa13.9□□□□□ -0.18
TCF3-220ENST00000611869 CCDC97Q96F63 343 aaPredicted RBP13.9□□□□□ -0.18
TCF3-220ENST00000611869 P2RX7Q99572 595 aaKnown RBP13.9□□□□□ -0.18
TCF3-220ENST00000611869 CREB3O43889 395 aa13.9□□□□□ -0.18
TCF3-220ENST00000611869 PCK1P35558 622 aa13.9□□□□□ -0.18
TCF3-220ENST00000611869 TAP1Q03518 808 aa13.9□□□□□ -0.18
TCF3-220ENST00000611869 APTXQ7Z2E3 356 aaKnown RBP13.9□□□□□ -0.18
TCF3-220ENST00000611869 GABPB2Q8TAK5 448 aaPredicted RBP13.9□□□□□ -0.18
TCF3-220ENST00000611869 TTC17Q96AE7 1141 aa13.9□□□□□ -0.18
TCF3-220ENST00000611869 SMYD2Q9NRG4 433 aa13.9□□□□□ -0.18
TCF3-220ENST00000611869 A0A0A6YYK5 440 aaPredicted RBP13.9□□□□□ -0.18
TCF3-220ENST00000611869 SPAG7O75391 227 aa13.9□□□□□ -0.18
TCF3-220ENST00000611869 MAPTP10636 758 aaKnown RBP13.9□□□□□ -0.18
TCF3-220ENST00000611869 LCP1P13796 627 aa13.9□□□□□ -0.18
TCF3-220ENST00000611869 EIF3EP60228 445 aaKnown RBP13.9□□□□□ -0.18
TCF3-220ENST00000611869 MAP7D1Q3KQU3 841 aa13.9□□□□□ -0.18
TCF3-220ENST00000611869 COBLL1Q53SF7 1204 aa13.9□□□□□ -0.18
TCF3-220ENST00000611869 TAS2R14Q9NYV8 317 aa13.9□□□□□ -0.18
TCF3-220ENST00000611869 TRPM3Q9HCF6 1732 aaPredicted RBP13.89□□□□□ -0.19
TCF3-220ENST00000611869 ADM5C9JUS6 153 aa13.89□□□□□ -0.19
TCF3-220ENST00000611869 PSMC4P43686 418 aa13.89□□□□□ -0.19
TCF3-220ENST00000611869 CLK2P49760 499 aaKnown RBP13.89□□□□□ -0.19
TCF3-220ENST00000611869 KCTD19Q17RG1 926 aaPredicted RBP13.89□□□□□ -0.19
TCF3-220ENST00000611869 TADA2BQ86TJ2 420 aa13.89□□□□□ -0.19
TCF3-220ENST00000611869 CCDC117Q8IWD4 279 aaPredicted RBP13.89□□□□□ -0.19
TCF3-220ENST00000611869 CHMP6Q96FZ7 201 aa13.89□□□□□ -0.19
TCF3-220ENST00000611869 SCYL1Q96KG9 808 aa13.89□□□□□ -0.19
TCF3-220ENST00000611869 UBIAD1Q9Y5Z9 338 aa13.89□□□□□ -0.19
TCF3-220ENST00000611869 BAZ2AQ9UIF9 1905 aaKnown RBP13.89□□□□□ -0.19
TCF3-220ENST00000611869 ZNF263O14978 683 aa13.89□□□□□ -0.19
TCF3-220ENST00000611869 ASAP2O43150 1006 aa13.89□□□□□ -0.19
TCF3-220ENST00000611869 RARBP10826 455 aa13.89□□□□□ -0.19
TCF3-220ENST00000611869 ITIH2P19823 946 aa13.89□□□□□ -0.19
TCF3-220ENST00000611869 HNRNPH3P31942 346 aaKnown RBP13.89□□□□□ -0.19
TCF3-220ENST00000611869 LSP1P33241 339 aa13.89□□□□□ -0.19
TCF3-220ENST00000611869 MYL6P60660 151 aa13.89□□□□□ -0.19
TCF3-220ENST00000611869 ITGB3BPQ13352 177 aaPredicted RBP13.89□□□□□ -0.19
TCF3-220ENST00000611869 SPARCL1Q14515 664 aa13.89□□□□□ -0.19
TCF3-220ENST00000611869 PHLDB3Q6NSJ2 640 aa13.89□□□□□ -0.19
TCF3-220ENST00000611869 PPM1NQ8N819 430 aa13.89□□□□□ -0.19
TCF3-220ENST00000611869 TRAPPC12Q8WVT3 735 aa13.89□□□□□ -0.19
TCF3-220ENST00000611869 CCT8L2Q96SF2 557 aa13.89□□□□□ -0.19
TCF3-220ENST00000611869 ADARB2Q9NS39 739 aaKnown RBP13.89□□□□□ -0.19
TCF3-220ENST00000611869 TBC1D12O60347 775 aa13.89□□□□□ -0.19
TCF3-220ENST00000611869 CALCAP01258 141 aa13.89□□□□□ -0.19
TCF3-220ENST00000611869 FAM153BP0C7A2 387 aa13.89□□□□□ -0.19
TCF3-220ENST00000611869 ITGA8P53708 1063 aa13.89□□□□□ -0.19
TCF3-220ENST00000611869 FAM153CQ494X1 144 aa13.89□□□□□ -0.19
TCF3-220ENST00000611869 LRIG3Q6UXM1 1119 aa13.89□□□□□ -0.19
TCF3-220ENST00000611869 FAM84AQ96KN4 292 aa13.89□□□□□ -0.19
TCF3-220ENST00000611869 TTC25Q96NG3 672 aa13.89□□□□□ -0.19
TCF3-220ENST00000611869 FAM153AQ9UHL3 310 aa13.89□□□□□ -0.19
TCF3-220ENST00000611869 SNED1Q8TER0 1413 aa13.89□□□□□ -0.19
TCF3-220ENST00000611869 GNAT1P11488 350 aa13.89□□□□□ -0.19
TCF3-220ENST00000611869 ROR1Q01973 937 aa13.89□□□□□ -0.19
TCF3-220ENST00000611869 PIGHQ14442 188 aaPredicted RBP13.89□□□□□ -0.19
TCF3-220ENST00000611869 E2F5Q15329 346 aa13.89□□□□□ -0.19
TCF3-220ENST00000611869 ZNF449Q6P9G9 518 aa13.89□□□□□ -0.19
TCF3-220ENST00000611869 TBC1D1Q86TI0 1168 aaPredicted RBP13.89□□□□□ -0.19
TCF3-220ENST00000611869 NOP9Q86U38 636 aaKnown RBP13.89□□□□□ -0.19
TCF3-220ENST00000611869 NT5DC3Q86UY8 548 aa13.89□□□□□ -0.19
TCF3-220ENST00000611869 ARHGAP24Q8N264 748 aa13.89□□□□□ -0.19
TCF3-220ENST00000611869 VPS33BQ9H267 617 aa13.89□□□□□ -0.19
TCF3-220ENST00000611869 LCMT1Q9UIC8 334 aa13.89□□□□□ -0.19
TCF3-220ENST00000611869 PCDHGC5Q9Y5F6 944 aa13.89□□□□□ -0.19
TCF3-220ENST00000611869 IQANK1A0A1B0GTG1 560 aa13.88□□□□□ -0.19
TCF3-220ENST00000611869 VGLL3A8MV65 326 aa13.88□□□□□ -0.19
TCF3-220ENST00000611869 CST8O60676 142 aa13.88□□□□□ -0.19
TCF3-220ENST00000611869 KRT10P13645 584 aa13.88□□□□□ -0.19
TCF3-220ENST00000611869 RCN2Q14257 317 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms