RNA–Protein interactions for RNA: ENST00000611723.1

CLTCL1-207, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-207ENST00000611723 TRIM65Q6PJ69 517 aa17.2■□□□□ 0.34
CLTCL1-207ENST00000611723 OTOP2Q7RTS6 562 aa17.2■□□□□ 0.34
CLTCL1-207ENST00000611723 PDLIM2Q96JY6 352 aa17.2■□□□□ 0.34
CLTCL1-207ENST00000611723 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.2■□□□□ 0.34
CLTCL1-207ENST00000611723 LSM14BQ9BX40 385 aaKnown RBP17.2■□□□□ 0.34
CLTCL1-207ENST00000611723 XYLT2Q9H1B5 865 aa17.2■□□□□ 0.34
CLTCL1-207ENST00000611723 TUBGCP4Q9UGJ1 667 aa17.2■□□□□ 0.34
CLTCL1-207ENST00000611723 LRRN2O75325 713 aa17.19■□□□□ 0.34
CLTCL1-207ENST00000611723 DGKIO75912 1065 aa17.19■□□□□ 0.34
CLTCL1-207ENST00000611723 POMCP01189 267 aa17.19■□□□□ 0.34
CLTCL1-207ENST00000611723 ITGB3P05106 788 aa17.19■□□□□ 0.34
CLTCL1-207ENST00000611723 IBSPP21815 317 aaPredicted RBP17.19■□□□□ 0.34
CLTCL1-207ENST00000611723 PIK3CAP42336 1068 aa17.19■□□□□ 0.34
CLTCL1-207ENST00000611723 KCNJ6P48051 423 aa17.19■□□□□ 0.34
CLTCL1-207ENST00000611723 GUCY2FP51841 1108 aa17.19■□□□□ 0.34
CLTCL1-207ENST00000611723 MYL6P60660 151 aa17.19■□□□□ 0.34
CLTCL1-207ENST00000611723 DEFB103AP81534 67 aa17.19■□□□□ 0.34
CLTCL1-207ENST00000611723 DSC1Q08554 894 aa17.19■□□□□ 0.34
CLTCL1-207ENST00000611723 TUSC3Q13454 348 aa17.19■□□□□ 0.34
CLTCL1-207ENST00000611723 PTPN21Q16825 1174 aa17.19■□□□□ 0.34
CLTCL1-207ENST00000611723 WDR44Q5JSH3 913 aa17.19■□□□□ 0.34
CLTCL1-207ENST00000611723 RASIP1Q5U651 963 aa17.19■□□□□ 0.34
CLTCL1-207ENST00000611723 ABI1Q8IZP0 508 aa17.19■□□□□ 0.34
CLTCL1-207ENST00000611723 LRRC52Q8N7C0 313 aa17.19■□□□□ 0.34
CLTCL1-207ENST00000611723 NEK11Q8NG66 645 aa17.19■□□□□ 0.34
CLTCL1-207ENST00000611723 ZNF689Q96CS4 500 aaPredicted RBP17.19■□□□□ 0.34
CLTCL1-207ENST00000611723 DDX27Q96GQ7 796 aaKnown RBP17.19■□□□□ 0.34
CLTCL1-207ENST00000611723 PCMTD1Q96MG8 357 aaPredicted RBP17.19■□□□□ 0.34
CLTCL1-207ENST00000611723 UROC1Q96N76 676 aa17.19■□□□□ 0.34
CLTCL1-207ENST00000611723 TTYH3Q9C0H2 523 aa17.19■□□□□ 0.34
CLTCL1-207ENST00000611723 GANQ9H2C0 597 aa17.19■□□□□ 0.34
CLTCL1-207ENST00000611723 IMPACTQ9P2X3 320 aa17.19■□□□□ 0.34
CLTCL1-207ENST00000611723 AGAP1Q9UPQ3 857 aa17.19■□□□□ 0.34
CLTCL1-207ENST00000611723 INPP5FQ9Y2H2 1132 aa17.19■□□□□ 0.34
CLTCL1-207ENST00000611723 RFX1P22670 979 aa17.18■□□□□ 0.34
CLTCL1-207ENST00000611723 POLR2BP30876 1174 aaKnown RBP17.18■□□□□ 0.34
CLTCL1-207ENST00000611723 TRIM14Q14142 442 aa17.18■□□□□ 0.34
CLTCL1-207ENST00000611723 TMC6Q7Z403 805 aa17.18■□□□□ 0.34
CLTCL1-207ENST00000611723 COLGALT2Q8IYK4 626 aa17.18■□□□□ 0.34
CLTCL1-207ENST00000611723 CCDC150Q8NCX0 1101 aa17.18■□□□□ 0.34
CLTCL1-207ENST00000611723 PHOSPHO2Q8TCD6 241 aa17.18■□□□□ 0.34
CLTCL1-207ENST00000611723 FAM81BQ96LP2 452 aa17.18■□□□□ 0.34
CLTCL1-207ENST00000611723 NAA15Q9BXJ9 866 aaKnown RBP17.18■□□□□ 0.34
CLTCL1-207ENST00000611723 MRPL9Q9BYD2 267 aaKnown RBP17.18■□□□□ 0.34
CLTCL1-207ENST00000611723 TBC1D13Q9NVG8 400 aa17.18■□□□□ 0.34
CLTCL1-207ENST00000611723 APEX2Q9UBZ4 518 aa17.18■□□□□ 0.34
CLTCL1-207ENST00000611723 A0A1W2PQJ5 194 aa17.17■□□□□ 0.34
CLTCL1-207ENST00000611723 DDHD2O94830 711 aa17.17■□□□□ 0.34
CLTCL1-207ENST00000611723 KRT19P08727 400 aa17.17■□□□□ 0.34
CLTCL1-207ENST00000611723 UCHL3P15374 230 aa17.17■□□□□ 0.34
CLTCL1-207ENST00000611723 PAX3P23760 479 aa17.17■□□□□ 0.34
CLTCL1-207ENST00000611723 PNPLA4P41247 253 aa17.17■□□□□ 0.34
CLTCL1-207ENST00000611723 UPP1Q16831 310 aa17.17■□□□□ 0.34
CLTCL1-207ENST00000611723 FAM109BQ6ICB4 259 aaPredicted RBP17.17■□□□□ 0.34
CLTCL1-207ENST00000611723 PHLDB3Q6NSJ2 640 aa17.17■□□□□ 0.34
CLTCL1-207ENST00000611723 DRC7Q8IY82 874 aa17.17■□□□□ 0.34
CLTCL1-207ENST00000611723 TMEM130Q8N3G9 435 aa17.17■□□□□ 0.34
CLTCL1-207ENST00000611723 TATDN2Q93075 761 aa17.17■□□□□ 0.34
CLTCL1-207ENST00000611723 HPDLQ96IR7 371 aa17.17■□□□□ 0.34
CLTCL1-207ENST00000611723 NT5C1BQ96P26 610 aa17.17■□□□□ 0.34
CLTCL1-207ENST00000611723 PI4K2AQ9BTU6 479 aa17.17■□□□□ 0.34
CLTCL1-207ENST00000611723 IMPG2Q9BZV3 1241 aa17.17■□□□□ 0.34
CLTCL1-207ENST00000611723 MTIF3Q9H2K0 278 aaKnown RBP17.17■□□□□ 0.34
CLTCL1-207ENST00000611723 RC3H2Q9HBD1 1191 aaKnown RBP17.17■□□□□ 0.34
CLTCL1-207ENST00000611723 APOBEC3GQ9HC16 384 aaKnown RBP17.17■□□□□ 0.34
CLTCL1-207ENST00000611723 FAM207AQ9NSI2 230 aaPredicted RBP17.17■□□□□ 0.34
CLTCL1-207ENST00000611723 CAPN11Q9UMQ6 739 aa17.17■□□□□ 0.34
CLTCL1-207ENST00000611723 R3HCC1Q9Y3T6 440 aaKnown RBP17.17■□□□□ 0.34
CLTCL1-207ENST00000611723 UNC80Q8N2C7 3258 aa17.16■□□□□ 0.34
CLTCL1-207ENST00000611723 TDRD15B5MCY1 1934 aaKnown RBP17.16■□□□□ 0.34
CLTCL1-207ENST00000611723 TBKBP1A7MCY6 615 aa17.16■□□□□ 0.34
CLTCL1-207ENST00000611723 EPHB6O15197 1021 aa17.16■□□□□ 0.34
CLTCL1-207ENST00000611723 UPP2O95045 317 aa17.16■□□□□ 0.34
CLTCL1-207ENST00000611723 GYPCP04921 128 aa17.16■□□□□ 0.34
CLTCL1-207ENST00000611723 TRIM21P19474 475 aaKnown RBP17.16■□□□□ 0.34
CLTCL1-207ENST00000611723 GATMP50440 423 aa17.16■□□□□ 0.34
CLTCL1-207ENST00000611723 NOP14P78316 857 aaKnown RBP17.16■□□□□ 0.34
CLTCL1-207ENST00000611723 GCNT1Q02742 428 aa17.16■□□□□ 0.34
CLTCL1-207ENST00000611723 MYO1EQ12965 1108 aa17.16■□□□□ 0.34
CLTCL1-207ENST00000611723 DCLRE1AQ6PJP8 1040 aa17.16■□□□□ 0.34
CLTCL1-207ENST00000611723 ENOSF1Q7L5Y1 443 aa17.16■□□□□ 0.34
CLTCL1-207ENST00000611723 PPFIBP1Q86W92 1011 aa17.16■□□□□ 0.34
CLTCL1-207ENST00000611723 ZNF280BQ86YH2 543 aa17.16■□□□□ 0.34
CLTCL1-207ENST00000611723 CMTR2Q8IYT2 770 aaKnown RBP17.16■□□□□ 0.34
CLTCL1-207ENST00000611723 JAKMIP2Q96AA8 810 aa17.16■□□□□ 0.34
CLTCL1-207ENST00000611723 PPP1R9BQ96SB3 815 aa17.16■□□□□ 0.34
CLTCL1-207ENST00000611723 SLC9A7Q96T83 725 aa17.16■□□□□ 0.34
CLTCL1-207ENST00000611723 CDX2Q99626 313 aaPredicted RBP17.16■□□□□ 0.34
CLTCL1-207ENST00000611723 TMEM175Q9BSA9 504 aa17.16■□□□□ 0.34
CLTCL1-207ENST00000611723 NRDE2Q9H7Z3 1164 aa17.16■□□□□ 0.34
CLTCL1-207ENST00000611723 GOLGA2P5Q9HBQ8 144 aa17.16■□□□□ 0.34
CLTCL1-207ENST00000611723 CXXC1Q9P0U4 656 aaPredicted RBP17.16■□□□□ 0.34
CLTCL1-207ENST00000611723 CEP72Q9P209 647 aa17.16■□□□□ 0.34
CLTCL1-207ENST00000611723 NUB1Q9Y5A7 615 aa17.16■□□□□ 0.34
CLTCL1-207ENST00000611723 SCN1AP35498 2009 aa17.16■□□□□ 0.34
CLTCL1-207ENST00000611723 FNDC1Q4ZHG4 1894 aaPredicted RBP17.16■□□□□ 0.34
CLTCL1-207ENST00000611723 ZBBXA8MT70 800 aa17.15■□□□□ 0.34
CLTCL1-207ENST00000611723 TMEM189-UBE2V1I3L0A0 370 aa17.15■□□□□ 0.34
CLTCL1-207ENST00000611723 PODXLO00592 558 aa17.15■□□□□ 0.34
CLTCL1-207ENST00000611723 PPEF2O14830 753 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms