RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 BIRC3Q13489 604 aa17.01■□□□□ 0.31
RTN1-209ENST00000611068 ITIH4Q14624 930 aa17.01■□□□□ 0.31
RTN1-209ENST00000611068 DPP9Q86TI2 863 aa17.01■□□□□ 0.31
RTN1-209ENST00000611068 ARL10Q8N8L6 244 aa17.01■□□□□ 0.31
RTN1-209ENST00000611068 LNPEPQ9UIQ6 1025 aa17.01■□□□□ 0.31
RTN1-209ENST00000611068 IVNS1ABPQ9Y6Y0 642 aa17.01■□□□□ 0.31
RTN1-209ENST00000611068 ABLIM1O14639 778 aa17■□□□□ 0.31
RTN1-209ENST00000611068 NOL4O94818 638 aa17■□□□□ 0.31
RTN1-209ENST00000611068 GNA14O95837 355 aa17■□□□□ 0.31
RTN1-209ENST00000611068 PRLRP16471 622 aa17■□□□□ 0.31
RTN1-209ENST00000611068 DMP1Q13316 513 aaPredicted RBP17■□□□□ 0.31
RTN1-209ENST00000611068 TSKSQ9UJT2 592 aa17■□□□□ 0.31
RTN1-209ENST00000611068 A0A0G2JMZ2 1700 aa17■□□□□ 0.31
RTN1-209ENST00000611068 GJB1P08034 283 aa17■□□□□ 0.31
RTN1-209ENST00000611068 ATP6V1C1P21283 382 aa17■□□□□ 0.31
RTN1-209ENST00000611068 RNASE9P60153 205 aaKnown RBP17■□□□□ 0.31
RTN1-209ENST00000611068 HLTFQ14527 1009 aaKnown RBP eCLIP17■□□□□ 0.31
RTN1-209ENST00000611068 XKR3Q5GH77 459 aa17■□□□□ 0.31
RTN1-209ENST00000611068 STXBP4Q6ZWJ1 553 aa17■□□□□ 0.31
RTN1-209ENST00000611068 PPP1R16BQ96T49 567 aa17■□□□□ 0.31
RTN1-209ENST00000611068 FRMD4BQ9Y2L6 1034 aa17■□□□□ 0.31
RTN1-209ENST00000611068 MAFBQ9Y5Q3 323 aaPredicted RBP17■□□□□ 0.31
RTN1-209ENST00000611068 ZNFX1Q9P2E3 1918 aaKnown RBP17■□□□□ 0.31
RTN1-209ENST00000611068 ZNF189O75820 626 aaPredicted RBP17■□□□□ 0.31
RTN1-209ENST00000611068 PSMC2P35998 433 aaKnown RBP17■□□□□ 0.31
RTN1-209ENST00000611068 KLC1Q07866 573 aa17■□□□□ 0.31
RTN1-209ENST00000611068 SFSWAPQ12872 951 aaKnown RBP17■□□□□ 0.31
RTN1-209ENST00000611068 EMC2Q15006 297 aa17■□□□□ 0.31
RTN1-209ENST00000611068 MEA1Q16626 185 aa17■□□□□ 0.31
RTN1-209ENST00000611068 LRRC71Q8N4P6 559 aa17■□□□□ 0.31
RTN1-209ENST00000611068 TMEM161BQ8NDZ6 487 aa17■□□□□ 0.31
RTN1-209ENST00000611068 RDM1Q8NG50 284 aa17■□□□□ 0.31
RTN1-209ENST00000611068 SLC35C1Q96A29 364 aa17■□□□□ 0.31
RTN1-209ENST00000611068 ACCSQ96QU6 501 aa17■□□□□ 0.31
RTN1-209ENST00000611068 STRA6Q9BX79 667 aa17■□□□□ 0.31
RTN1-209ENST00000611068 RHBDL2Q9NX52 303 aa17■□□□□ 0.31
RTN1-209ENST00000611068 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.99■□□□□ 0.31
RTN1-209ENST00000611068 AFPP02771 609 aaKnown RBP16.99■□□□□ 0.31
RTN1-209ENST00000611068 EIF4BP23588 611 aaKnown RBP16.99■□□□□ 0.31
RTN1-209ENST00000611068 ECHS1P30084 290 aa16.99■□□□□ 0.31
RTN1-209ENST00000611068 ADCYAP1R1P41586 468 aa16.99■□□□□ 0.31
RTN1-209ENST00000611068 BPIFB4P59827 614 aa16.99■□□□□ 0.31
RTN1-209ENST00000611068 IGBP1P78318 339 aa16.99■□□□□ 0.31
RTN1-209ENST00000611068 ATP11AP98196 1134 aa16.99■□□□□ 0.31
RTN1-209ENST00000611068 PRAMEF19Q5SWL8 479 aa16.99■□□□□ 0.31
RTN1-209ENST00000611068 METTL7BQ6UX53 244 aa16.99■□□□□ 0.31
RTN1-209ENST00000611068 FRMD5Q7Z6J6 570 aa16.99■□□□□ 0.31
RTN1-209ENST00000611068 DDX42Q86XP3 938 aaKnown RBP eCLIP16.99■□□□□ 0.31
RTN1-209ENST00000611068 ZC3H3Q8IXZ2 948 aaKnown RBP16.99■□□□□ 0.31
RTN1-209ENST00000611068 SEPT1Q8WYJ6 367 aa16.99■□□□□ 0.31
RTN1-209ENST00000611068 POP1Q99575 1024 aaKnown RBP16.99■□□□□ 0.31
RTN1-209ENST00000611068 TLR10Q9BXR5 811 aa16.99■□□□□ 0.31
RTN1-209ENST00000611068 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.99■□□□□ 0.31
RTN1-209ENST00000611068 ZNHIT6Q9NWK9 470 aaKnown RBP16.99■□□□□ 0.31
RTN1-209ENST00000611068 ATXN10Q9UBB4 475 aa16.99■□□□□ 0.31
RTN1-209ENST00000611068 SALL4Q9UJQ4 1053 aa16.99■□□□□ 0.31
RTN1-209ENST00000611068 MYH9P35579 1960 aaKnown RBP16.99■□□□□ 0.31
RTN1-209ENST00000611068 LRRIQ4A6NIV6 560 aa16.99■□□□□ 0.31
RTN1-209ENST00000611068 FLT3P36888 993 aa16.99■□□□□ 0.31
RTN1-209ENST00000611068 CCNA1P78396 465 aa16.99■□□□□ 0.31
RTN1-209ENST00000611068 CBWD6Q4V339 395 aa16.99■□□□□ 0.31
RTN1-209ENST00000611068 CBWD3Q5JTY5 395 aa16.99■□□□□ 0.31
RTN1-209ENST00000611068 CBWD5Q5RIA9 395 aa16.99■□□□□ 0.31
RTN1-209ENST00000611068 CELF3Q5SZQ8 465 aaKnown RBP16.99■□□□□ 0.31
RTN1-209ENST00000611068 GPR142Q7Z601 462 aa16.99■□□□□ 0.31
RTN1-209ENST00000611068 DNAAF5Q86Y56 855 aa16.99■□□□□ 0.31
RTN1-209ENST00000611068 CCDC127Q96BQ5 260 aa16.99■□□□□ 0.31
RTN1-209ENST00000611068 AJAP1Q9UKB5 411 aaPredicted RBP16.99■□□□□ 0.31
RTN1-209ENST00000611068 TBX20Q9UMR3 447 aa16.99■□□□□ 0.31
RTN1-209ENST00000611068 ASAP2O43150 1006 aa16.98■□□□□ 0.31
RTN1-209ENST00000611068 RAD51CO43502 376 aa16.98■□□□□ 0.31
RTN1-209ENST00000611068 ATG7O95352 703 aa16.98■□□□□ 0.31
RTN1-209ENST00000611068 RAD23BP54727 409 aa16.98■□□□□ 0.31
RTN1-209ENST00000611068 LACTBP83111 547 aaPredicted RBP16.98■□□□□ 0.31
RTN1-209ENST00000611068 RNASELQ05823 741 aaKnown RBP16.98■□□□□ 0.31
RTN1-209ENST00000611068 RAPGEF1Q13905 1077 aa16.98■□□□□ 0.31
RTN1-209ENST00000611068 RUFY4Q6ZNE9 571 aa16.98■□□□□ 0.31
RTN1-209ENST00000611068 APLFQ8IW19 511 aaPredicted RBP16.98■□□□□ 0.31
RTN1-209ENST00000611068 ASAP3Q8TDY4 903 aa16.98■□□□□ 0.31
RTN1-209ENST00000611068 ZIC5Q96T25 663 aa16.98■□□□□ 0.31
RTN1-209ENST00000611068 GPR20Q99678 358 aa16.98■□□□□ 0.31
RTN1-209ENST00000611068 AZI2Q9H6S1 392 aa16.98■□□□□ 0.31
RTN1-209ENST00000611068 ARHGEF3Q9NR81 526 aa16.98■□□□□ 0.31
RTN1-209ENST00000611068 IGSF9BQ9UPX0 1349 aa16.98■□□□□ 0.31
RTN1-209ENST00000611068 WDR81Q562E7 1941 aa16.98■□□□□ 0.31
RTN1-209ENST00000611068 DGAT1O75907 488 aa16.98■□□□□ 0.31
RTN1-209ENST00000611068 MMEP08473 750 aa16.98■□□□□ 0.31
RTN1-209ENST00000611068 CHN1P15882 459 aa16.98■□□□□ 0.31
RTN1-209ENST00000611068 ADSSP30520 456 aa16.98■□□□□ 0.31
RTN1-209ENST00000611068 PSMC4P43686 418 aa16.98■□□□□ 0.31
RTN1-209ENST00000611068 AGBL2Q5U5Z8 902 aa16.98■□□□□ 0.31
RTN1-209ENST00000611068 UBLCP1Q8WVY7 318 aaPredicted RBP16.98■□□□□ 0.31
RTN1-209ENST00000611068 BAP1Q92560 729 aa16.98■□□□□ 0.31
RTN1-209ENST00000611068 NEUROG2Q9H2A3 272 aa16.98■□□□□ 0.31
RTN1-209ENST00000611068 HSPBP1Q9NZL4 362 aa16.98■□□□□ 0.31
RTN1-209ENST00000611068 ARHGAP20Q9P2F6 1191 aa16.98■□□□□ 0.31
RTN1-209ENST00000611068 FUT4P22083 530 aa16.97■□□□□ 0.31
RTN1-209ENST00000611068 MARSP56192 900 aaKnown RBP16.97■□□□□ 0.31
RTN1-209ENST00000611068 GTF2BQ00403 316 aa16.97■□□□□ 0.31
RTN1-209ENST00000611068 EXOC3L4Q17RC7 722 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms