RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 NOP14P78316 857 aaKnown RBP11.12□□□□□ -0.63
PABPC1-224ENST00000610907 GUCY1A3Q02108 690 aa11.12□□□□□ -0.63
PABPC1-224ENST00000610907 NCOA4Q13772 614 aa11.12□□□□□ -0.63
PABPC1-224ENST00000610907 PPP1R7Q15435 360 aa11.12□□□□□ -0.63
PABPC1-224ENST00000610907 TREML2Q5T2D2 321 aa11.12□□□□□ -0.63
PABPC1-224ENST00000610907 TMEM270Q6UE05 265 aa11.12□□□□□ -0.63
PABPC1-224ENST00000610907 ARMC9Q7Z3E5 817 aa11.12□□□□□ -0.63
PABPC1-224ENST00000610907 ZBTB8OSQ8IWT0 167 aa11.12□□□□□ -0.63
PABPC1-224ENST00000610907 KATNAL2Q8IYT4 538 aa11.12□□□□□ -0.63
PABPC1-224ENST00000610907 UBR7Q8N806 425 aa11.12□□□□□ -0.63
PABPC1-224ENST00000610907 RBBP8NLQ8NC74 664 aaPredicted RBP11.12□□□□□ -0.63
PABPC1-224ENST00000610907 BBOF1Q8ND07 529 aa11.12□□□□□ -0.63
PABPC1-224ENST00000610907 ATL2Q8NHH9 583 aa11.12□□□□□ -0.63
PABPC1-224ENST00000610907 PRPF31Q8WWY3 499 aaKnown RBP11.12□□□□□ -0.63
PABPC1-224ENST00000610907 CPA5Q8WXQ8 436 aa11.12□□□□□ -0.63
PABPC1-224ENST00000610907 DDX27Q96GQ7 796 aaKnown RBP11.12□□□□□ -0.63
PABPC1-224ENST00000610907 FAXDC2Q96IV6 333 aa11.12□□□□□ -0.63
PABPC1-224ENST00000610907 ZBTB45Q96K62 511 aaPredicted RBP11.12□□□□□ -0.63
PABPC1-224ENST00000610907 ROPN1BQ9BZX4 212 aaPredicted RBP11.12□□□□□ -0.63
PABPC1-224ENST00000610907 ZNF518BQ9C0D4 1074 aa11.12□□□□□ -0.63
PABPC1-224ENST00000610907 RASSF4Q9H2L5 321 aa11.12□□□□□ -0.63
PABPC1-224ENST00000610907 EPB41L4BQ9H329 900 aa11.12□□□□□ -0.63
PABPC1-224ENST00000610907 ROPN1Q9HAT0 212 aaPredicted RBP11.12□□□□□ -0.63
PABPC1-224ENST00000610907 APOBEC3GQ9HC16 384 aaKnown RBP11.12□□□□□ -0.63
PABPC1-224ENST00000610907 PARVAQ9NVD7 372 aa11.12□□□□□ -0.63
PABPC1-224ENST00000610907 NOVA2Q9UNW9 492 aaKnown RBP11.12□□□□□ -0.63
PABPC1-224ENST00000610907 PTPRJQ12913 1337 aa11.12□□□□□ -0.63
PABPC1-224ENST00000610907 A0A087WUV0 522 aaPredicted RBP11.11□□□□□ -0.63
PABPC1-224ENST00000610907 IGKV6-21A0A0C4DH24 114 aa11.11□□□□□ -0.63
PABPC1-224ENST00000610907 A0A0G2JLL6 359 aaPredicted RBP11.11□□□□□ -0.63
PABPC1-224ENST00000610907 TCRBV7S2A1N4TA0A589 114 aa11.11□□□□□ -0.63
PABPC1-224ENST00000610907 OGTO15294 1046 aa11.11□□□□□ -0.63
PABPC1-224ENST00000610907 MSCO60682 206 aa11.11□□□□□ -0.63
PABPC1-224ENST00000610907 GAS8O95995 478 aa11.11□□□□□ -0.63
PABPC1-224ENST00000610907 ASS1P00966 412 aaKnown RBP11.11□□□□□ -0.63
PABPC1-224ENST00000610907 AGTP01019 485 aa11.11□□□□□ -0.63
PABPC1-224ENST00000610907 CALB1P05937 261 aa11.11□□□□□ -0.63
PABPC1-224ENST00000610907 HPDP32754 393 aaPredicted RBP11.11□□□□□ -0.63
PABPC1-224ENST00000610907 TCF7P36402 384 aaPredicted RBP11.11□□□□□ -0.63
PABPC1-224ENST00000610907 IREB2P48200 963 aaKnown RBP11.11□□□□□ -0.63
PABPC1-224ENST00000610907 WNT7BP56706 349 aa11.11□□□□□ -0.63
PABPC1-224ENST00000610907 IRX3P78415 501 aaPredicted RBP11.11□□□□□ -0.63
PABPC1-224ENST00000610907 TAP1Q03518 808 aa11.11□□□□□ -0.63
PABPC1-224ENST00000610907 MCL1Q07820 350 aa11.11□□□□□ -0.63
PABPC1-224ENST00000610907 FSTL1Q12841 308 aa11.11□□□□□ -0.63
PABPC1-224ENST00000610907 MAMLD1Q13495 774 aa11.11□□□□□ -0.63
PABPC1-224ENST00000610907 PTK6Q13882 451 aa11.11□□□□□ -0.63
PABPC1-224ENST00000610907 CCNG2Q16589 344 aa11.11□□□□□ -0.63
PABPC1-224ENST00000610907 DUOXA2Q1HG44 320 aa11.11□□□□□ -0.63
PABPC1-224ENST00000610907 SGSM1Q2NKQ1 1148 aa11.11□□□□□ -0.63
PABPC1-224ENST00000610907 LMBRD2Q68DH5 695 aaPredicted RBP11.11□□□□□ -0.63
PABPC1-224ENST00000610907 TTC19Q6DKK2 380 aaPredicted RBP11.11□□□□□ -0.63
PABPC1-224ENST00000610907 PRRT2Q7Z6L0 340 aaPredicted RBP11.11□□□□□ -0.63
PABPC1-224ENST00000610907 YTHDF3Q7Z739 585 aaKnown RBP11.11□□□□□ -0.63
PABPC1-224ENST00000610907 NLRP14Q86W24 1093 aa11.11□□□□□ -0.63
PABPC1-224ENST00000610907 NCAPG2Q86XI2 1143 aa11.11□□□□□ -0.63
PABPC1-224ENST00000610907 EXD1Q8NHP7 514 aa11.11□□□□□ -0.63
PABPC1-224ENST00000610907 CCT8L2Q96SF2 557 aa11.11□□□□□ -0.63
PABPC1-224ENST00000610907 CCDC113Q9H0I3 377 aa11.11□□□□□ -0.63
PABPC1-224ENST00000610907 BCCIPQ9P287 314 aaKnown RBP eCLIP11.11□□□□□ -0.63
PABPC1-224ENST00000610907 ANKFY1Q9P2R3 1169 aa11.11□□□□□ -0.63
PABPC1-224ENST00000610907 NUB1Q9Y5A7 615 aa11.11□□□□□ -0.63
PABPC1-224ENST00000610907 DICER1Q9UPY3 1922 aaKnown RBP11.11□□□□□ -0.63
PABPC1-224ENST00000610907 GMNCA6NCL1 334 aa11.11□□□□□ -0.63
PABPC1-224ENST00000610907 ASAP2O43150 1006 aa11.11□□□□□ -0.63
PABPC1-224ENST00000610907 THAP12O43422 761 aa11.11□□□□□ -0.63
PABPC1-224ENST00000610907 FAM189A1O60320 539 aa11.11□□□□□ -0.63
PABPC1-224ENST00000610907 SORBS3O60504 671 aa11.11□□□□□ -0.63
PABPC1-224ENST00000610907 MMP8P22894 467 aa11.11□□□□□ -0.63
PABPC1-224ENST00000610907 MAGOHP61326 146 aaKnown RBP11.11□□□□□ -0.63
PABPC1-224ENST00000610907 YWHAEP62258 255 aaKnown RBP11.11□□□□□ -0.63
PABPC1-224ENST00000610907 LMNB2Q03252 620 aa11.11□□□□□ -0.63
PABPC1-224ENST00000610907 TFDP1Q14186 410 aa11.11□□□□□ -0.63
PABPC1-224ENST00000610907 SLC29A2Q14542 456 aa11.11□□□□□ -0.63
PABPC1-224ENST00000610907 MAPK6Q16659 721 aa11.11□□□□□ -0.63
PABPC1-224ENST00000610907 LRRC38Q5VT99 294 aa11.11□□□□□ -0.63
PABPC1-224ENST00000610907 SPOPLQ6IQ16 392 aa11.11□□□□□ -0.63
PABPC1-224ENST00000610907 CEP128Q6ZU80 1094 aa11.11□□□□□ -0.63
PABPC1-224ENST00000610907 ERO1BQ86YB8 467 aa11.11□□□□□ -0.63
PABPC1-224ENST00000610907 OR5B17Q8NGF7 314 aa11.11□□□□□ -0.63
PABPC1-224ENST00000610907 FEZF2Q8TBJ5 459 aa11.11□□□□□ -0.63
PABPC1-224ENST00000610907 MYCBPAPQ8TBZ2 947 aa11.11□□□□□ -0.63
PABPC1-224ENST00000610907 ZNF606Q8WXB4 792 aa11.11□□□□□ -0.63
PABPC1-224ENST00000610907 PPM1EQ8WY54 764 aa11.11□□□□□ -0.63
PABPC1-224ENST00000610907 RNF25Q96BH1 459 aaPredicted RBP11.11□□□□□ -0.63
PABPC1-224ENST00000610907 DCPSQ96C86 337 aaKnown RBP11.11□□□□□ -0.63
PABPC1-224ENST00000610907 ACO2Q99798 780 aaKnown RBP11.11□□□□□ -0.63
PABPC1-224ENST00000610907 FOXP3Q9BZS1 431 aa11.11□□□□□ -0.63
PABPC1-224ENST00000610907 ADARB2Q9NS39 739 aaKnown RBP11.11□□□□□ -0.63
PABPC1-224ENST00000610907 IP6K2Q9UHH9 426 aa11.11□□□□□ -0.63
PABPC1-224ENST00000610907 FAM169AQ9Y6X4 670 aa11.11□□□□□ -0.63
PABPC1-224ENST00000610907 PTPRFP10586 1907 aa11.1□□□□□ -0.63
PABPC1-224ENST00000610907 UMODL1Q5DID0 1318 aa11.1□□□□□ -0.63
PABPC1-224ENST00000610907 FAM170AA1A519 330 aa11.1□□□□□ -0.63
PABPC1-224ENST00000610907 RIPK2O43353 540 aa11.1□□□□□ -0.63
PABPC1-224ENST00000610907 TRAPPC3O43617 180 aa11.1□□□□□ -0.63
PABPC1-224ENST00000610907 KRT17Q04695 432 aa11.1□□□□□ -0.63
PABPC1-224ENST00000610907 SLC20A2Q08357 652 aa11.1□□□□□ -0.63
PABPC1-224ENST00000610907 LAMTOR4Q0VGL1 99 aa11.1□□□□□ -0.63
PABPC1-224ENST00000610907 KLF1Q13351 362 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms