RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 SP110Q9HB58 689 aa15.02□□□□□ -0.01
PCDHB16-201ENST00000609684 FAM49BQ9NUQ9 324 aa15.02□□□□□ -0.01
PCDHB16-201ENST00000609684 CDR2Q01850 454 aa15.02□□□□□ -0.01
PCDHB16-201ENST00000609684 SLC15A2Q16348 729 aa15.02□□□□□ -0.01
PCDHB16-201ENST00000609684 CDR2LQ86X02 465 aaPredicted RBP15.02□□□□□ -0.01
PCDHB16-201ENST00000609684 LRRC43Q8N309 656 aa15.02□□□□□ -0.01
PCDHB16-201ENST00000609684 OR6P1Q8NGX9 317 aa15.02□□□□□ -0.01
PCDHB16-201ENST00000609684 SCFD1Q8WVM8 642 aa15.02□□□□□ -0.01
PCDHB16-201ENST00000609684 PRPF31Q8WWY3 499 aaKnown RBP15.02□□□□□ -0.01
PCDHB16-201ENST00000609684 N4BP2L2Q92802 583 aaPredicted RBP15.02□□□□□ -0.01
PCDHB16-201ENST00000609684 PGBD4Q96DM1 585 aa15.02□□□□□ -0.01
PCDHB16-201ENST00000609684 GTF3C4Q9UKN8 822 aa15.02□□□□□ -0.01
PCDHB16-201ENST00000609684 BCL9O00512 1426 aa15.02□□□□□ -0.01
PCDHB16-201ENST00000609684 SLC25A27O95847 323 aa15.01□□□□□ -0.01
PCDHB16-201ENST00000609684 APOEP02649 317 aa15.01□□□□□ -0.01
PCDHB16-201ENST00000609684 TPI1P60174 286 aa15.01□□□□□ -0.01
PCDHB16-201ENST00000609684 DRP2Q13474 957 aa15.01□□□□□ -0.01
PCDHB16-201ENST00000609684 HABP4Q5JVS0 413 aaKnown RBP15.01□□□□□ -0.01
PCDHB16-201ENST00000609684 SPATA21Q7Z572 469 aa15.01□□□□□ -0.01
PCDHB16-201ENST00000609684 ZNF677Q86XU0 584 aa15.01□□□□□ -0.01
PCDHB16-201ENST00000609684 SPON2Q9BUD6 331 aa15.01□□□□□ -0.01
PCDHB16-201ENST00000609684 TRIM4Q9C037 500 aa15.01□□□□□ -0.01
PCDHB16-201ENST00000609684 CARD9Q9H257 536 aa15.01□□□□□ -0.01
PCDHB16-201ENST00000609684 C17orf75Q9HAS0 396 aa15.01□□□□□ -0.01
PCDHB16-201ENST00000609684 SUN2Q9UH99 717 aa15.01□□□□□ -0.01
PCDHB16-201ENST00000609684 IL18RAPO95256 599 aa15.01□□□□□ -0.01
PCDHB16-201ENST00000609684 LMNAP02545 664 aaKnown RBP15.01□□□□□ -0.01
PCDHB16-201ENST00000609684 PMS1P54277 932 aaKnown RBP15.01□□□□□ -0.01
PCDHB16-201ENST00000609684 SNAPC2Q13487 334 aa15.01□□□□□ -0.01
PCDHB16-201ENST00000609684 PDE1CQ14123 709 aaPredicted RBP15.01□□□□□ -0.01
PCDHB16-201ENST00000609684 KYNUQ16719 465 aa15.01□□□□□ -0.01
PCDHB16-201ENST00000609684 C1orf146Q5VVC0 180 aa15.01□□□□□ -0.01
PCDHB16-201ENST00000609684 ZNF473Q8WTR7 871 aaKnown RBP15.01□□□□□ -0.01
PCDHB16-201ENST00000609684 SCFD2Q8WU76 684 aa15.01□□□□□ -0.01
PCDHB16-201ENST00000609684 EPAS1Q99814 870 aa15.01□□□□□ -0.01
PCDHB16-201ENST00000609684 CBWD1Q9BRT8 395 aa15.01□□□□□ -0.01
PCDHB16-201ENST00000609684 PLEKHA5Q9HAU0 1116 aa15.01□□□□□ -0.01
PCDHB16-201ENST00000609684 PRMT7Q9NVM4 692 aaPredicted RBP15.01□□□□□ -0.01
PCDHB16-201ENST00000609684 PRKAG2Q9UGJ0 569 aa15.01□□□□□ -0.01
PCDHB16-201ENST00000609684 GGT7Q9UJ14 662 aa15.01□□□□□ -0.01
PCDHB16-201ENST00000609684 SALL1Q9NSC2 1324 aa15.01□□□□□ -0.01
PCDHB16-201ENST00000609684 DFFAO00273 331 aa15.01□□□□□ -0.01
PCDHB16-201ENST00000609684 PRAMEP78395 509 aa15.01□□□□□ -0.01
PCDHB16-201ENST00000609684 HNRNPLLQ8WVV9 542 aaKnown RBP15.01□□□□□ -0.01
PCDHB16-201ENST00000609684 ALKBH8Q96BT7 664 aaKnown RBP15.01□□□□□ -0.01
PCDHB16-201ENST00000609684 PACSIN1Q9BY11 444 aa15.01□□□□□ -0.01
PCDHB16-201ENST00000609684 BRD2P25440 801 aaKnown RBP15.01□□□□□ -0.01
PCDHB16-201ENST00000609684 CACNB2Q08289 660 aaPredicted RBP15.01□□□□□ -0.01
PCDHB16-201ENST00000609684 SMTNL2Q2TAL5 461 aa15.01□□□□□ -0.01
PCDHB16-201ENST00000609684 C4orf33Q8N1A6 199 aa15.01□□□□□ -0.01
PCDHB16-201ENST00000609684 PIP4K2CQ8TBX8 421 aa15.01□□□□□ -0.01
PCDHB16-201ENST00000609684 ARHGEF26Q96DR7 871 aa15.01□□□□□ -0.01
PCDHB16-201ENST00000609684 AGAP3Q96P47 875 aa15.01□□□□□ -0.01
PCDHB16-201ENST00000609684 NT5C1AQ9BXI3 368 aa15.01□□□□□ -0.01
PCDHB16-201ENST00000609684 ERAP1Q9NZ08 941 aa15.01□□□□□ -0.01
PCDHB16-201ENST00000609684 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.01□□□□□ -0.01
PCDHB16-201ENST00000609684 SLC8A2Q9UPR5 921 aa15.01□□□□□ -0.01
PCDHB16-201ENST00000609684 PHF20L1A8MW92 1017 aa15□□□□□ -0.01
PCDHB16-201ENST00000609684 CTSHP09668 335 aa15□□□□□ -0.01
PCDHB16-201ENST00000609684 CPB1P15086 417 aa15□□□□□ -0.01
PCDHB16-201ENST00000609684 TCF7P36402 384 aaPredicted RBP15□□□□□ -0.01
PCDHB16-201ENST00000609684 HERVK_113P62684 666 aa15□□□□□ -0.01
PCDHB16-201ENST00000609684 HBP1O60381 514 aa15□□□□□ -0.01
PCDHB16-201ENST00000609684 CDC42EP1Q00587 391 aa15□□□□□ -0.01
PCDHB16-201ENST00000609684 ACTN3Q08043 901 aaPredicted RBP15□□□□□ -0.01
PCDHB16-201ENST00000609684 SEZ6Q53EL9 994 aa15□□□□□ -0.01
PCDHB16-201ENST00000609684 FRA10AC1Q70Z53 315 aa15□□□□□ -0.01
PCDHB16-201ENST00000609684 GMCL1P1Q8NEA9 526 aa15□□□□□ -0.01
PCDHB16-201ENST00000609684 TMX2Q9Y320 296 aa15□□□□□ -0.01
PCDHB16-201ENST00000609684 CST8O60676 142 aa15□□□□□ -0.01
PCDHB16-201ENST00000609684 SNX2O60749 519 aa15□□□□□ -0.01
PCDHB16-201ENST00000609684 HSD17B4P51659 736 aa15□□□□□ -0.01
PCDHB16-201ENST00000609684 ITGA8P53708 1063 aa15□□□□□ -0.01
PCDHB16-201ENST00000609684 MTM1Q13496 603 aa15□□□□□ -0.01
PCDHB16-201ENST00000609684 FEZF2Q8TBJ5 459 aa15□□□□□ -0.01
PCDHB16-201ENST00000609684 XPO7Q9UIA9 1087 aaKnown RBP15□□□□□ -0.01
PCDHB16-201ENST00000609684 SMG5Q9UPR3 1016 aaKnown RBP15□□□□□ -0.01
PCDHB16-201ENST00000609684 COL5A2P05997 1499 aaPredicted RBP15□□□□□ -0.01
PCDHB16-201ENST00000609684 AK9Q5TCS8 1911 aa15□□□□□ -0.01
PCDHB16-201ENST00000609684 MEFVO15553 781 aaPredicted RBP15□□□□□ -0.01
PCDHB16-201ENST00000609684 HSPA8P11142 646 aaKnown RBP15□□□□□ -0.01
PCDHB16-201ENST00000609684 SHMT1P34896 483 aa15□□□□□ -0.01
PCDHB16-201ENST00000609684 Q4G0T1 1027 aa15□□□□□ -0.01
PCDHB16-201ENST00000609684 AGBL2Q5U5Z8 902 aa15□□□□□ -0.01
PCDHB16-201ENST00000609684 FAM161BQ96MY7 647 aa15□□□□□ -0.01
PCDHB16-201ENST00000609684 ZC3H7BQ9UGR2 993 aaKnown RBP15□□□□□ -0.01
PCDHB16-201ENST00000609684 AKAP3O75969 853 aa14.99□□□□□ -0.01
PCDHB16-201ENST00000609684 RALAP11233 206 aa14.99□□□□□ -0.01
PCDHB16-201ENST00000609684 TAF1CQ15572 869 aaPredicted RBP14.99□□□□□ -0.01
PCDHB16-201ENST00000609684 NDUFAF2Q8N183 169 aa14.99□□□□□ -0.01
PCDHB16-201ENST00000609684 ARHGAP20Q9P2F6 1191 aa14.99□□□□□ -0.01
PCDHB16-201ENST00000609684 TRIM33Q9UPN9 1127 aa14.99□□□□□ -0.01
PCDHB16-201ENST00000609684 ORC6Q9Y5N6 252 aa14.99□□□□□ -0.01
PCDHB16-201ENST00000609684 SGPL1O95470 568 aa14.99□□□□□ -0.01
PCDHB16-201ENST00000609684 C6orf222P0C671 652 aaPredicted RBP14.99□□□□□ -0.01
PCDHB16-201ENST00000609684 SLC13A5Q86YT5 568 aaPredicted RBP14.99□□□□□ -0.01
PCDHB16-201ENST00000609684 RNF135Q8IUD6 432 aa14.99□□□□□ -0.01
PCDHB16-201ENST00000609684 VGLL2Q8N8G2 317 aa14.99□□□□□ -0.01
PCDHB16-201ENST00000609684 C1orf131Q8NDD1 294 aaKnown RBP14.99□□□□□ -0.01
PCDHB16-201ENST00000609684 UBA3Q8TBC4 463 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms