RNA–Protein interactions for RNA: ENST00000609081.1

LMBR1-220, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-220ENST00000609081 SPATA31D3P0C874 917 aa16.4■□□□□ 0.22
LMBR1-220ENST00000609081 GARTP22102 1010 aa16.4■□□□□ 0.22
LMBR1-220ENST00000609081 AARSP49588 968 aaKnown RBP eCLIP16.4■□□□□ 0.22
LMBR1-220ENST00000609081 SIGLEC14Q08ET2 396 aa16.4■□□□□ 0.22
LMBR1-220ENST00000609081 MRPL58Q14197 206 aaKnown RBP16.4■□□□□ 0.22
LMBR1-220ENST00000609081 PPM1LQ5SGD2 360 aa16.4■□□□□ 0.22
LMBR1-220ENST00000609081 SPATA1Q5VX52 437 aa16.4■□□□□ 0.22
LMBR1-220ENST00000609081 RESP18Q5W5W9 173 aa16.4■□□□□ 0.22
LMBR1-220ENST00000609081 TRIM67Q6ZTA4 783 aa16.4■□□□□ 0.22
LMBR1-220ENST00000609081 SPATA31D4Q6ZUB0 917 aa16.4■□□□□ 0.22
LMBR1-220ENST00000609081 SYCP3Q8IZU3 236 aa16.4■□□□□ 0.22
LMBR1-220ENST00000609081 ZNF461Q8TAF7 563 aa16.4■□□□□ 0.22
LMBR1-220ENST00000609081 DHX58Q96C10 678 aa16.4■□□□□ 0.22
LMBR1-220ENST00000609081 ZNF707Q96C28 371 aaPredicted RBP16.4■□□□□ 0.22
LMBR1-220ENST00000609081 TRIM9Q9C026 710 aa16.4■□□□□ 0.22
LMBR1-220ENST00000609081 TUBGCP4Q9UGJ1 667 aa16.4■□□□□ 0.22
LMBR1-220ENST00000609081 PCDHB8Q9UN66 801 aa16.4■□□□□ 0.22
LMBR1-220ENST00000609081 PCDHA7Q9UN72 937 aa16.4■□□□□ 0.22
LMBR1-220ENST00000609081 CDY1Q9Y6F8 540 aa16.4■□□□□ 0.22
LMBR1-220ENST00000609081 ZFP37Q9Y6Q3 630 aaPredicted RBP16.4■□□□□ 0.22
LMBR1-220ENST00000609081 I3L4J1 428 aa16.39■□□□□ 0.21
LMBR1-220ENST00000609081 M0QZQ0 153 aa16.39■□□□□ 0.21
LMBR1-220ENST00000609081 RFPL2O75678 378 aa16.39■□□□□ 0.21
LMBR1-220ENST00000609081 C8AP07357 584 aa16.39■□□□□ 0.21
LMBR1-220ENST00000609081 KRT85P78386 507 aa16.39■□□□□ 0.21
LMBR1-220ENST00000609081 DNM1Q05193 864 aaKnown RBP16.39■□□□□ 0.21
LMBR1-220ENST00000609081 MTMR3Q13615 1198 aa16.39■□□□□ 0.21
LMBR1-220ENST00000609081 PKP1Q13835 747 aa16.39■□□□□ 0.21
LMBR1-220ENST00000609081 BECN1Q14457 450 aa16.39■□□□□ 0.21
LMBR1-220ENST00000609081 TMEM132DQ14C87 1099 aa16.39■□□□□ 0.21
LMBR1-220ENST00000609081 TPGS2Q68CL5 300 aa16.39■□□□□ 0.21
LMBR1-220ENST00000609081 ZNF280DQ6N043 979 aa16.39■□□□□ 0.21
LMBR1-220ENST00000609081 SPRYD3Q8NCJ5 442 aa16.39■□□□□ 0.21
LMBR1-220ENST00000609081 NXPE3Q969Y0 559 aa16.39■□□□□ 0.21
LMBR1-220ENST00000609081 MFSD14AQ96MC6 490 aa16.39■□□□□ 0.21
LMBR1-220ENST00000609081 FAM86C2PA6NEL3 165 aa16.38■□□□□ 0.21
LMBR1-220ENST00000609081 EIF3DO15371 548 aaKnown RBP eCLIP16.38■□□□□ 0.21
LMBR1-220ENST00000609081 POLR2DO15514 142 aaKnown RBP16.38■□□□□ 0.21
LMBR1-220ENST00000609081 TBC1D4O60343 1298 aa16.38■□□□□ 0.21
LMBR1-220ENST00000609081 SP100P23497 879 aaPredicted RBP16.38■□□□□ 0.21
LMBR1-220ENST00000609081 ADSSP30520 456 aa16.38■□□□□ 0.21
LMBR1-220ENST00000609081 ACOT2P49753 483 aa16.38■□□□□ 0.21
LMBR1-220ENST00000609081 FOXD4L6Q3SYB3 417 aaPredicted RBP16.38■□□□□ 0.21
LMBR1-220ENST00000609081 ZBTB41Q5SVQ8 909 aa16.38■□□□□ 0.21
LMBR1-220ENST00000609081 JADE1Q6IE81 842 aa16.38■□□□□ 0.21
LMBR1-220ENST00000609081 FOXD4L3Q6VB84 417 aaPredicted RBP16.38■□□□□ 0.21
LMBR1-220ENST00000609081 FAM212AQ96EL1 285 aa16.38■□□□□ 0.21
LMBR1-220ENST00000609081 C7orf25Q9BPX7 421 aa16.38■□□□□ 0.21
LMBR1-220ENST00000609081 KCNH6Q9H252 994 aa16.38■□□□□ 0.21
LMBR1-220ENST00000609081 TBC1D7Q9P0N9 293 aa16.38■□□□□ 0.21
LMBR1-220ENST00000609081 IGSF9Q9P2J2 1179 aa16.38■□□□□ 0.21
LMBR1-220ENST00000609081 USP25Q9UHP3 1055 aa16.38■□□□□ 0.21
LMBR1-220ENST00000609081 DOCK8Q8NF50 2099 aa16.38■□□□□ 0.21
LMBR1-220ENST00000609081 PVALEFA0A1B0GWK0 134 aa16.37■□□□□ 0.21
LMBR1-220ENST00000609081 ADAM12O43184 909 aa16.37■□□□□ 0.21
LMBR1-220ENST00000609081 ABLIM3O94929 683 aa16.37■□□□□ 0.21
LMBR1-220ENST00000609081 OAZ2O95190 189 aa16.37■□□□□ 0.21
LMBR1-220ENST00000609081 MYBP10242 640 aa16.37■□□□□ 0.21
LMBR1-220ENST00000609081 ATF2P15336 505 aa16.37■□□□□ 0.21
LMBR1-220ENST00000609081 IGFBP6P24592 240 aaPredicted RBP16.37■□□□□ 0.21
LMBR1-220ENST00000609081 ELF1P32519 619 aa16.37■□□□□ 0.21
LMBR1-220ENST00000609081 SNRPFP62306 86 aaKnown RBP16.37■□□□□ 0.21
LMBR1-220ENST00000609081 ASIC1P78348 528 aa16.37■□□□□ 0.21
LMBR1-220ENST00000609081 ROR1Q01973 937 aa16.37■□□□□ 0.21
LMBR1-220ENST00000609081 YWHAHQ04917 246 aaPredicted RBP16.37■□□□□ 0.21
LMBR1-220ENST00000609081 SPAG1Q07617 926 aa16.37■□□□□ 0.21
LMBR1-220ENST00000609081 CTXN3Q4LDR2 81 aa16.37■□□□□ 0.21
LMBR1-220ENST00000609081 USP37Q86T82 979 aa16.37■□□□□ 0.21
LMBR1-220ENST00000609081 CEP57L1Q8IYX8 460 aa16.37■□□□□ 0.21
LMBR1-220ENST00000609081 EPS15L1Q9UBC2 864 aa16.37■□□□□ 0.21
LMBR1-220ENST00000609081 LIMD1Q9UGP4 676 aa16.37■□□□□ 0.21
LMBR1-220ENST00000609081 KCNH3Q9ULD8 1083 aa16.37■□□□□ 0.21
LMBR1-220ENST00000609081 TRIOO75962 3097 aa16.37■□□□□ 0.21
LMBR1-220ENST00000609081 UBE4BO95155 1302 aa16.37■□□□□ 0.21
LMBR1-220ENST00000609081 ANO9A1A5B4 782 aa16.36■□□□□ 0.21
LMBR1-220ENST00000609081 TMEM221A6NGB7 291 aa16.36■□□□□ 0.21
LMBR1-220ENST00000609081 TISP43B9A030 160 aa16.36■□□□□ 0.21
LMBR1-220ENST00000609081 M0R296 226 aa16.36■□□□□ 0.21
LMBR1-220ENST00000609081 MYL1P05976 194 aa16.36■□□□□ 0.21
LMBR1-220ENST00000609081 TYMPP19971 482 aa16.36■□□□□ 0.21
LMBR1-220ENST00000609081 GBP2P32456 591 aaPredicted RBP16.36■□□□□ 0.21
LMBR1-220ENST00000609081 CASP5P51878 434 aa16.36■□□□□ 0.21
LMBR1-220ENST00000609081 LILRA4P59901 499 aa16.36■□□□□ 0.21
LMBR1-220ENST00000609081 KCNA1Q09470 495 aa16.36■□□□□ 0.21
LMBR1-220ENST00000609081 FAM26FQ5R3K3 315 aa16.36■□□□□ 0.21
LMBR1-220ENST00000609081 C9orf57Q5W0N0 161 aa16.36■□□□□ 0.21
LMBR1-220ENST00000609081 CRELD2Q6UXH1 353 aaPredicted RBP16.36■□□□□ 0.21
LMBR1-220ENST00000609081 RSPO2Q6UXX9 243 aaPredicted RBP16.36■□□□□ 0.21
LMBR1-220ENST00000609081 DSTYKQ6XUX3 929 aa16.36■□□□□ 0.21
LMBR1-220ENST00000609081 UNC13DQ70J99 1090 aa16.36■□□□□ 0.21
LMBR1-220ENST00000609081 BRSK2Q8IWQ3 736 aa16.36■□□□□ 0.21
LMBR1-220ENST00000609081 TCEAL8Q8IYN2 117 aa16.36■□□□□ 0.21
LMBR1-220ENST00000609081 SLC7A14Q8TBB6 771 aa16.36■□□□□ 0.21
LMBR1-220ENST00000609081 CACTINQ8WUQ7 758 aaKnown RBP16.36■□□□□ 0.21
LMBR1-220ENST00000609081 SPATA32Q96LK8 384 aa16.36■□□□□ 0.21
LMBR1-220ENST00000609081 SCAND2PQ9GZW5 306 aaPredicted RBP16.36■□□□□ 0.21
LMBR1-220ENST00000609081 KIAA1586Q9HCI6 787 aa16.36■□□□□ 0.21
LMBR1-220ENST00000609081 FBXL5Q9UKA1 691 aa16.36■□□□□ 0.21
LMBR1-220ENST00000609081 DSEQ9UL01 958 aa16.36■□□□□ 0.21
LMBR1-220ENST00000609081 OR6C75A6NL08 312 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms