RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 FAM47EQ6ZV65 393 aa23.73■■□□□ 1.39
SHANK2-220ENST00000608988 MIER3Q7Z3K6 550 aa23.73■■□□□ 1.39
SHANK2-220ENST00000608988 ASAP3Q8TDY4 903 aa23.73■■□□□ 1.39
SHANK2-220ENST00000608988 DEFB129Q9H1M3 183 aa23.73■■□□□ 1.39
SHANK2-220ENST00000608988 DNAJC17Q9NVM6 304 aaKnown RBP23.73■■□□□ 1.39
SHANK2-220ENST00000608988 FETUBQ9UGM5 382 aa23.73■■□□□ 1.39
SHANK2-220ENST00000608988 R3HDM2Q9Y2K5 976 aaKnown RBP23.73■■□□□ 1.39
SHANK2-220ENST00000608988 ZNFX1Q9P2E3 1918 aaKnown RBP23.72■■□□□ 1.39
SHANK2-220ENST00000608988 RAD23BP54727 409 aa23.72■■□□□ 1.39
SHANK2-220ENST00000608988 SNRNP35Q16560 246 aaKnown RBP23.72■■□□□ 1.39
SHANK2-220ENST00000608988 CCDC142Q17RM4 750 aa23.72■■□□□ 1.39
SHANK2-220ENST00000608988 SH3BP5LQ7L8J4 393 aa23.72■■□□□ 1.39
SHANK2-220ENST00000608988 LONP2Q86WA8 852 aa23.72■■□□□ 1.39
SHANK2-220ENST00000608988 KIAA0825Q8IV33 1275 aa23.72■■□□□ 1.39
SHANK2-220ENST00000608988 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.72■■□□□ 1.39
SHANK2-220ENST00000608988 PARD3BQ8TEW8 1205 aa23.72■■□□□ 1.39
SHANK2-220ENST00000608988 SLC7A6OSQ96CW6 309 aaPredicted RBP23.72■■□□□ 1.39
SHANK2-220ENST00000608988 NUDCD1Q96RS6 583 aa23.72■■□□□ 1.39
SHANK2-220ENST00000608988 MXRA8Q9BRK3 442 aa23.72■■□□□ 1.39
SHANK2-220ENST00000608988 RAB20Q9NX57 234 aa23.72■■□□□ 1.39
SHANK2-220ENST00000608988 NKX1-2Q9UD57 310 aaPredicted RBP23.72■■□□□ 1.39
SHANK2-220ENST00000608988 NFASCO94856 1347 aa23.71■■□□□ 1.39
SHANK2-220ENST00000608988 FAM196BA6NMK8 535 aa23.71■■□□□ 1.39
SHANK2-220ENST00000608988 FOXO6A8MYZ6 492 aa23.71■■□□□ 1.39
SHANK2-220ENST00000608988 C2CD2LO14523 706 aa23.71■■□□□ 1.39
SHANK2-220ENST00000608988 ZBED4O75132 1171 aa23.71■■□□□ 1.39
SHANK2-220ENST00000608988 RALAP11233 206 aa23.71■■□□□ 1.39
SHANK2-220ENST00000608988 GYS1P13807 737 aa23.71■■□□□ 1.39
SHANK2-220ENST00000608988 PTPN4P29074 926 aa23.71■■□□□ 1.39
SHANK2-220ENST00000608988 HSPA1LP34931 641 aa23.71■■□□□ 1.39
SHANK2-220ENST00000608988 LIN9Q5TKA1 542 aa23.71■■□□□ 1.39
SHANK2-220ENST00000608988 TRIM72Q6ZMU5 477 aa23.71■■□□□ 1.39
SHANK2-220ENST00000608988 APBB1IPQ7Z5R6 666 aaPredicted RBP23.71■■□□□ 1.39
SHANK2-220ENST00000608988 C9orf72Q96LT7 481 aa23.71■■□□□ 1.39
SHANK2-220ENST00000608988 SH3GL3Q99963 347 aa23.71■■□□□ 1.39
SHANK2-220ENST00000608988 HERPUD2Q9BSE4 406 aa23.71■■□□□ 1.39
SHANK2-220ENST00000608988 TBC1D10AQ9BXI6 508 aa23.71■■□□□ 1.39
SHANK2-220ENST00000608988 OSBPL8Q9BZF1 889 aa23.71■■□□□ 1.39
SHANK2-220ENST00000608988 KIAA1683Q9H0B3 1180 aa23.71■■□□□ 1.39
SHANK2-220ENST00000608988 RANBP17Q9H2T7 1088 aaKnown RBP23.71■■□□□ 1.39
SHANK2-220ENST00000608988 DCLRE1BQ9H816 532 aa23.71■■□□□ 1.39
SHANK2-220ENST00000608988 TISP43B9A030 160 aa23.7■■□□□ 1.39
SHANK2-220ENST00000608988 DNALI1O14645 258 aaPredicted RBP23.7■■□□□ 1.39
SHANK2-220ENST00000608988 RARRES1P49788 294 aa23.7■■□□□ 1.39
SHANK2-220ENST00000608988 DNAJC3Q13217 504 aa23.7■■□□□ 1.39
SHANK2-220ENST00000608988 FYB2Q5VWT5 728 aa23.7■■□□□ 1.39
SHANK2-220ENST00000608988 OGFOD1Q8N543 542 aa23.7■■□□□ 1.39
SHANK2-220ENST00000608988 VCPIP1Q96JH7 1222 aa23.7■■□□□ 1.39
SHANK2-220ENST00000608988 MFSD14AQ96MC6 490 aa23.7■■□□□ 1.39
SHANK2-220ENST00000608988 PAIP2Q9BPZ3 127 aaKnown RBP23.7■■□□□ 1.39
SHANK2-220ENST00000608988 PHACTR1Q9C0D0 580 aa23.7■■□□□ 1.39
SHANK2-220ENST00000608988 KIAA1586Q9HCI6 787 aa23.7■■□□□ 1.39
SHANK2-220ENST00000608988 CYLDQ9NQC7 956 aa23.7■■□□□ 1.39
SHANK2-220ENST00000608988 HAO1Q9UJM8 370 aa23.7■■□□□ 1.39
SHANK2-220ENST00000608988 RGPD3A6NKT7 1758 aaPredicted RBP23.7■■□□□ 1.39
SHANK2-220ENST00000608988 RGPD4Q7Z3J3 1758 aa23.7■■□□□ 1.39
SHANK2-220ENST00000608988 AHCYL1O43865 530 aa23.7■■□□□ 1.38
SHANK2-220ENST00000608988 ECE2O60344 883 aa23.7■■□□□ 1.38
SHANK2-220ENST00000608988 PLA2G6O60733 806 aa23.7■■□□□ 1.38
SHANK2-220ENST00000608988 SKAP2O75563 359 aaPredicted RBP23.7■■□□□ 1.38
SHANK2-220ENST00000608988 ZWINTO95229 277 aa23.7■■□□□ 1.38
SHANK2-220ENST00000608988 SLURP2P0DP57 97 aa23.7■■□□□ 1.38
SHANK2-220ENST00000608988 TARSP26639 723 aaKnown RBP23.7■■□□□ 1.38
SHANK2-220ENST00000608988 GCAP28676 217 aa23.7■■□□□ 1.38
SHANK2-220ENST00000608988 SLC30A10Q6XR72 485 aa23.7■■□□□ 1.38
SHANK2-220ENST00000608988 MRPL47Q9HD33 250 aaKnown RBP23.7■■□□□ 1.38
SHANK2-220ENST00000608988 ACP6Q9NPH0 428 aa23.7■■□□□ 1.38
SHANK2-220ENST00000608988 NPTXRO95502 500 aa23.69■■□□□ 1.38
SHANK2-220ENST00000608988 FESP07332 822 aa23.69■■□□□ 1.38
SHANK2-220ENST00000608988 LINGO3P0C6S8 592 aa23.69■■□□□ 1.38
SHANK2-220ENST00000608988 T-ENOLP0DO92 83 aa23.69■■□□□ 1.38
SHANK2-220ENST00000608988 TAL1P17542 331 aaPredicted RBP23.69■■□□□ 1.38
SHANK2-220ENST00000608988 SEPT14Q6ZU15 432 aa23.69■■□□□ 1.38
SHANK2-220ENST00000608988 KCNV2Q8TDN2 545 aa23.69■■□□□ 1.38
SHANK2-220ENST00000608988 FBXL18Q96ME1 805 aa23.69■■□□□ 1.38
SHANK2-220ENST00000608988 ARHGEF10LQ9HCE6 1279 aa23.69■■□□□ 1.38
SHANK2-220ENST00000608988 SAYSD1Q9NPB0 183 aa23.69■■□□□ 1.38
SHANK2-220ENST00000608988 BCS1LQ9Y276 419 aa23.69■■□□□ 1.38
SHANK2-220ENST00000608988 PCDHB2Q9Y5E7 798 aa23.69■■□□□ 1.38
SHANK2-220ENST00000608988 UMODL1Q5DID0 1318 aa23.69■■□□□ 1.38
SHANK2-220ENST00000608988 GDF11O95390 407 aa23.68■■□□□ 1.38
SHANK2-220ENST00000608988 MARK3P27448 753 aa23.68■■□□□ 1.38
SHANK2-220ENST00000608988 TCP10Q12799 353 aa23.68■■□□□ 1.38
SHANK2-220ENST00000608988 MORF4L2Q15014 288 aa23.68■■□□□ 1.38
SHANK2-220ENST00000608988 P3H1Q32P28 736 aa23.68■■□□□ 1.38
SHANK2-220ENST00000608988 HHATQ5VTY9 493 aa23.68■■□□□ 1.38
SHANK2-220ENST00000608988 CHURC1Q8WUH1 139 aa23.68■■□□□ 1.38
SHANK2-220ENST00000608988 STOML1Q9UBI4 398 aa23.68■■□□□ 1.38
SHANK2-220ENST00000608988 NRXN2Q9P2S2 1712 aa23.68■■□□□ 1.38
SHANK2-220ENST00000608988 LRRD1A4D1F6 860 aa23.68■■□□□ 1.38
SHANK2-220ENST00000608988 ATP2A1O14983 1001 aa23.68■■□□□ 1.38
SHANK2-220ENST00000608988 CYP1A1P04798 512 aaPredicted RBP23.68■■□□□ 1.38
SHANK2-220ENST00000608988 FDX1P10109 184 aa23.68■■□□□ 1.38
SHANK2-220ENST00000608988 PCK1P35558 622 aa23.68■■□□□ 1.38
SHANK2-220ENST00000608988 NSFP46459 744 aaKnown RBP23.68■■□□□ 1.38
SHANK2-220ENST00000608988 QARSP47897 775 aaKnown RBP23.68■■□□□ 1.38
SHANK2-220ENST00000608988 VPS41P49754 854 aa23.68■■□□□ 1.38
SHANK2-220ENST00000608988 EAPPQ56P03 285 aaPredicted RBP23.68■■□□□ 1.38
SHANK2-220ENST00000608988 ANO7Q6IWH7 933 aa23.68■■□□□ 1.38
SHANK2-220ENST00000608988 CCDC174Q6PII3 467 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms