RNA–Protein interactions for RNA: ENST00000608945.1

ITGB5-213, Transcript of integrin subunit beta 5, humanhuman

TSL 2

Gene ITGB5, Length 267 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-213ENST00000608945 ZNF572Q7Z3I7 529 aaPredicted RBP2.41□□□□□ -2.02
ITGB5-213ENST00000608945 RSPH3Q86UC2 560 aa2.41□□□□□ -2.02
ITGB5-213ENST00000608945 ZBTB46Q86UZ6 589 aa2.41□□□□□ -2.02
ITGB5-213ENST00000608945 XYLT1Q86Y38 959 aa2.41□□□□□ -2.02
ITGB5-213ENST00000608945 RHOT1Q8IXI2 618 aa2.41□□□□□ -2.02
ITGB5-213ENST00000608945 DRC7Q8IY82 874 aa2.41□□□□□ -2.02
ITGB5-213ENST00000608945 TRMT2AQ8IZ69 625 aaKnown RBP2.41□□□□□ -2.02
ITGB5-213ENST00000608945 MIER2Q8N344 545 aa2.41□□□□□ -2.02
ITGB5-213ENST00000608945 SUPT20HQ8NEM7 779 aa2.41□□□□□ -2.02
ITGB5-213ENST00000608945 OR10H5Q8NGA6 315 aa2.41□□□□□ -2.02
ITGB5-213ENST00000608945 OR52N2Q8NGI0 321 aa2.41□□□□□ -2.02
ITGB5-213ENST00000608945 DDX55Q8NHQ9 600 aaKnown RBP eCLIP2.41□□□□□ -2.02
ITGB5-213ENST00000608945 CCHCR1Q8TD31 782 aa2.41□□□□□ -2.02
ITGB5-213ENST00000608945 CASKIN2Q8WXE0 1202 aa2.41□□□□□ -2.02
ITGB5-213ENST00000608945 FUBP3Q96I24 572 aaKnown RBP eCLIP2.41□□□□□ -2.02
ITGB5-213ENST00000608945 SLC2A13Q96QE2 648 aa2.41□□□□□ -2.02
ITGB5-213ENST00000608945 NDC1Q9BTX1 674 aa2.41□□□□□ -2.02
ITGB5-213ENST00000608945 SLC13A1Q9BZW2 595 aa2.41□□□□□ -2.02
ITGB5-213ENST00000608945 MAN1C1Q9NR34 630 aa2.41□□□□□ -2.02
ITGB5-213ENST00000608945 TDP1Q9NUW8 608 aa2.41□□□□□ -2.02
ITGB5-213ENST00000608945 SCOCQ9UIL1 159 aa2.41□□□□□ -2.02
ITGB5-213ENST00000608945 INTUQ9ULD6 942 aa2.41□□□□□ -2.02
ITGB5-213ENST00000608945 CENPVL1A0A0U1RR11 272 aa2.4□□□□□ -2.03
ITGB5-213ENST00000608945 GAGE12BA1L429 117 aa2.4□□□□□ -2.03
ITGB5-213ENST00000608945 GAGE12HA6NDE8 117 aa2.4□□□□□ -2.03
ITGB5-213ENST00000608945 CXorf49A8MYA2 514 aaPredicted RBP2.4□□□□□ -2.03
ITGB5-213ENST00000608945 RNASET2O00584 256 aaKnown RBP2.4□□□□□ -2.03
ITGB5-213ENST00000608945 NTN3O00634 580 aaPredicted RBP2.4□□□□□ -2.03
ITGB5-213ENST00000608945 GABRDO14764 452 aa2.4□□□□□ -2.03
ITGB5-213ENST00000608945 GPR32O75388 356 aa2.4□□□□□ -2.03
ITGB5-213ENST00000608945 POMCP01189 267 aa2.4□□□□□ -2.03
ITGB5-213ENST00000608945 CT47B1P0C2W7 299 aaPredicted RBP2.4□□□□□ -2.03
ITGB5-213ENST00000608945 ALOX15P16050 662 aaPredicted RBP2.4□□□□□ -2.03
ITGB5-213ENST00000608945 VCAM1P19320 739 aa2.4□□□□□ -2.03
ITGB5-213ENST00000608945 APOBEC3AP31941 199 aaPredicted RBP2.4□□□□□ -2.03
ITGB5-213ENST00000608945 CXCR5P32302 372 aa2.4□□□□□ -2.03
ITGB5-213ENST00000608945 PTGER1P34995 402 aa2.4□□□□□ -2.03
ITGB5-213ENST00000608945 RECQLP46063 649 aaPredicted RBP2.4□□□□□ -2.03
ITGB5-213ENST00000608945 RAP2BP61225 183 aa2.4□□□□□ -2.03
ITGB5-213ENST00000608945 EXOSC10Q01780 885 aaKnown RBP2.4□□□□□ -2.03
ITGB5-213ENST00000608945 KIF23Q02241 960 aaPredicted RBP2.4□□□□□ -2.03
ITGB5-213ENST00000608945 NHLH2Q02577 135 aa2.4□□□□□ -2.03
ITGB5-213ENST00000608945 PPP3CAQ08209 521 aa2.4□□□□□ -2.03
ITGB5-213ENST00000608945 BMT2Q1RMZ1 405 aa2.4□□□□□ -2.03
ITGB5-213ENST00000608945 INAVAQ3KP66 663 aa2.4□□□□□ -2.03
ITGB5-213ENST00000608945 TIGD2Q4W5G0 525 aa2.4□□□□□ -2.03
ITGB5-213ENST00000608945 AFMIDQ63HM1 303 aa2.4□□□□□ -2.03
ITGB5-213ENST00000608945 Q6ZVL8 140 aa2.4□□□□□ -2.03
ITGB5-213ENST00000608945 GPRIN1Q7Z2K8 1008 aa2.4□□□□□ -2.03
ITGB5-213ENST00000608945 GDF7Q7Z4P5 450 aa2.4□□□□□ -2.03
ITGB5-213ENST00000608945 PLXDC1Q8IUK5 500 aa2.4□□□□□ -2.03
ITGB5-213ENST00000608945 CBARPQ8N350 705 aaPredicted RBP2.4□□□□□ -2.03
ITGB5-213ENST00000608945 LILRA3Q8N6C8 439 aaPredicted RBP2.4□□□□□ -2.03
ITGB5-213ENST00000608945 REPS2Q8NFH8 660 aa2.4□□□□□ -2.03
ITGB5-213ENST00000608945 NLGN4YQ8NFZ3 816 aaPredicted RBP2.4□□□□□ -2.03
ITGB5-213ENST00000608945 NRG4Q8WWG1 115 aa2.4□□□□□ -2.03
ITGB5-213ENST00000608945 JADE3Q92613 823 aa2.4□□□□□ -2.03
ITGB5-213ENST00000608945 CEP95Q96GE4 821 aa2.4□□□□□ -2.03
ITGB5-213ENST00000608945 PHACTR3Q96KR7 559 aa2.4□□□□□ -2.03
ITGB5-213ENST00000608945 TEKT5Q96M29 485 aa2.4□□□□□ -2.03
ITGB5-213ENST00000608945 MRI1Q9BV20 369 aa2.4□□□□□ -2.03
ITGB5-213ENST00000608945 LSM14BQ9BX40 385 aaKnown RBP2.4□□□□□ -2.03
ITGB5-213ENST00000608945 SLC46A2Q9BY10 475 aa2.4□□□□□ -2.03
ITGB5-213ENST00000608945 CPEB1Q9BZB8 566 aaKnown RBP2.4□□□□□ -2.03
ITGB5-213ENST00000608945 CCDC8Q9H0W5 538 aaPredicted RBP2.4□□□□□ -2.03
ITGB5-213ENST00000608945 KCNH6Q9H252 994 aa2.4□□□□□ -2.03
ITGB5-213ENST00000608945 TYW1Q9NV66 732 aaKnown RBP2.4□□□□□ -2.03
ITGB5-213ENST00000608945 TRPM5Q9NZQ8 1165 aa2.4□□□□□ -2.03
ITGB5-213ENST00000608945 AJAP1Q9UKB5 411 aaPredicted RBP2.4□□□□□ -2.03
ITGB5-213ENST00000608945 ATP11BQ9Y2G3 1177 aa2.4□□□□□ -2.03
ITGB5-213ENST00000608945 MYBBP1AQ9BQG0 1328 aaKnown RBP2.4□□□□□ -2.03
ITGB5-213ENST00000608945 WASHC2CQ9Y4E1 1318 aa2.4□□□□□ -2.03
ITGB5-213ENST00000608945 WIPF3A6NGB9 483 aa2.39□□□□□ -2.03
ITGB5-213ENST00000608945 SGTAO43765 313 aa2.39□□□□□ -2.03
ITGB5-213ENST00000608945 LAG3P18627 525 aa2.39□□□□□ -2.03
ITGB5-213ENST00000608945 DDCP20711 480 aa2.39□□□□□ -2.03
ITGB5-213ENST00000608945 C5AR1P21730 350 aa2.39□□□□□ -2.03
ITGB5-213ENST00000608945 GUCY1A2P33402 732 aa2.39□□□□□ -2.03
ITGB5-213ENST00000608945 ALDH1A3P47895 512 aa2.39□□□□□ -2.03
ITGB5-213ENST00000608945 CCT4P50991 539 aaKnown RBP2.39□□□□□ -2.03
ITGB5-213ENST00000608945 USP14P54578 494 aa2.39□□□□□ -2.03
ITGB5-213ENST00000608945 ADKP55263 362 aaKnown RBP2.39□□□□□ -2.03
ITGB5-213ENST00000608945 RNASE9P60153 205 aaKnown RBP2.39□□□□□ -2.03
ITGB5-213ENST00000608945 CDC42EP1Q00587 391 aa2.39□□□□□ -2.03
ITGB5-213ENST00000608945 RAB39AQ14964 217 aa2.39□□□□□ -2.03
ITGB5-213ENST00000608945 PCBP2Q15366 365 aaKnown RBP eCLIP2.39□□□□□ -2.03
ITGB5-213ENST00000608945 UAP1L1Q3KQV9 507 aa2.39□□□□□ -2.03
ITGB5-213ENST00000608945 SPDYE7PQ495Y7 208 aa2.39□□□□□ -2.03
ITGB5-213ENST00000608945 MFSD14BQ5SR56 506 aa2.39□□□□□ -2.03
ITGB5-213ENST00000608945 C1QL3Q5VWW1 255 aa2.39□□□□□ -2.03
ITGB5-213ENST00000608945 ANKS6Q68DC2 871 aa2.39□□□□□ -2.03
ITGB5-213ENST00000608945 OTUD7BQ6GQQ9 843 aa2.39□□□□□ -2.03
ITGB5-213ENST00000608945 ARMC6Q6NXE6 501 aa2.39□□□□□ -2.03
ITGB5-213ENST00000608945 ZNF529Q6P280 563 aa2.39□□□□□ -2.03
ITGB5-213ENST00000608945 FOXR2Q6PJQ5 311 aa2.39□□□□□ -2.03
ITGB5-213ENST00000608945 GADL1Q6ZQY3 521 aa2.39□□□□□ -2.03
ITGB5-213ENST00000608945 MED25Q71SY5 747 aa2.39□□□□□ -2.03
ITGB5-213ENST00000608945 TTC7BQ86TV6 843 aa2.39□□□□□ -2.03
ITGB5-213ENST00000608945 AOPEPQ8N6M6 819 aa2.39□□□□□ -2.03
ITGB5-213ENST00000608945 RNF169Q8NCN4 708 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms