RNA–Protein interactions for RNA: ENST00000605895.5

RER1-209, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 3,044 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-209ENST00000605895 RINT1Q6NUQ1 792 aa16.36■□□□□ 0.21
RER1-209ENST00000605895 FAM178BQ8IXR5 827 aa16.36■□□□□ 0.21
RER1-209ENST00000605895 ZFAND2BQ8WV99 257 aa16.36■□□□□ 0.21
RER1-209ENST00000605895 USP6NLQ92738 828 aa16.36■□□□□ 0.21
RER1-209ENST00000605895 TTC17Q96AE7 1141 aa16.36■□□□□ 0.21
RER1-209ENST00000605895 OPTNQ96CV9 577 aa16.36■□□□□ 0.21
RER1-209ENST00000605895 SHCBP1LQ9BZQ2 653 aa16.36■□□□□ 0.21
RER1-209ENST00000605895 CHMP2BQ9UQN3 213 aa16.36■□□□□ 0.21
RER1-209ENST00000605895 ESYT2A0FGR8 921 aa16.35■□□□□ 0.21
RER1-209ENST00000605895 DDX39AO00148 427 aaKnown RBP16.35■□□□□ 0.21
RER1-209ENST00000605895 PGM3O95394 542 aa16.35■□□□□ 0.21
RER1-209ENST00000605895 EYA4O95677 639 aa16.35■□□□□ 0.21
RER1-209ENST00000605895 BCRP11274 1271 aa16.35■□□□□ 0.21
RER1-209ENST00000605895 ANKS1BQ7Z6G8 1248 aa16.35■□□□□ 0.21
RER1-209ENST00000605895 GATA6Q92908 595 aa16.35■□□□□ 0.21
RER1-209ENST00000605895 LRRC19Q9H756 370 aa16.35■□□□□ 0.21
RER1-209ENST00000605895 ZNF395Q9H8N7 513 aaPredicted RBP16.35■□□□□ 0.21
RER1-209ENST00000605895 MTMR4Q9NYA4 1195 aa16.35■□□□□ 0.21
RER1-209ENST00000605895 ZMYM2Q9UBW7 1377 aa16.35■□□□□ 0.21
RER1-209ENST00000605895 B2RBV5 119 aa16.35■□□□□ 0.21
RER1-209ENST00000605895 PFDN1O60925 122 aa16.35■□□□□ 0.21
RER1-209ENST00000605895 PLCB3Q01970 1234 aa16.35■□□□□ 0.21
RER1-209ENST00000605895 PDK4Q16654 411 aa16.35■□□□□ 0.21
RER1-209ENST00000605895 CTC1Q2NKJ3 1217 aa16.35■□□□□ 0.21
RER1-209ENST00000605895 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.35■□□□□ 0.21
RER1-209ENST00000605895 CD101Q93033 1021 aa16.35■□□□□ 0.21
RER1-209ENST00000605895 THTPAQ9BU02 230 aa16.35■□□□□ 0.21
RER1-209ENST00000605895 AGPAT3Q9NRZ7 376 aa16.35■□□□□ 0.21
RER1-209ENST00000605895 FAM237BA0A1B0GVD1 139 aa16.35■□□□□ 0.21
RER1-209ENST00000605895 RNASEH1O60930 286 aaKnown RBP16.35■□□□□ 0.21
RER1-209ENST00000605895 KRT5P13647 590 aa16.35■□□□□ 0.21
RER1-209ENST00000605895 ARHGAP4P98171 946 aa16.35■□□□□ 0.21
RER1-209ENST00000605895 NBPF5PQ86XG9 351 aaPredicted RBP16.35■□□□□ 0.21
RER1-209ENST00000605895 DCLK3Q9C098 648 aa16.35■□□□□ 0.21
RER1-209ENST00000605895 DDX18Q9NVP1 670 aaKnown RBP16.35■□□□□ 0.21
RER1-209ENST00000605895 CHCHD3Q9NX63 227 aaKnown RBP16.35■□□□□ 0.21
RER1-209ENST00000605895 NEU2Q9Y3R4 380 aa16.35■□□□□ 0.21
RER1-209ENST00000605895 MEI4A8MW99 385 aa16.34■□□□□ 0.21
RER1-209ENST00000605895 ATF7P17544 494 aaPredicted RBP16.34■□□□□ 0.21
RER1-209ENST00000605895 SSTR1P30872 391 aa16.34■□□□□ 0.21
RER1-209ENST00000605895 ARFIP2P53365 341 aa16.34■□□□□ 0.21
RER1-209ENST00000605895 NFIXQ14938 502 aa16.34■□□□□ 0.21
RER1-209ENST00000605895 QRICH1Q2TAL8 776 aa16.34■□□□□ 0.21
RER1-209ENST00000605895 C16orf86Q6ZW13 317 aa16.34■□□□□ 0.21
RER1-209ENST00000605895 PASD1Q8IV76 773 aa16.34■□□□□ 0.21
RER1-209ENST00000605895 TCP10LQ8TDR4 215 aa16.34■□□□□ 0.21
RER1-209ENST00000605895 ANKRD27Q96NW4 1050 aa16.34■□□□□ 0.21
RER1-209ENST00000605895 EIF2AK1Q9BQI3 630 aaKnown RBP16.34■□□□□ 0.21
RER1-209ENST00000605895 EBF3Q9H4W6 596 aa16.34■□□□□ 0.21
RER1-209ENST00000605895 SMYD3Q9H7B4 428 aa16.34■□□□□ 0.21
RER1-209ENST00000605895 UBR2Q8IWV8 1755 aa16.34■□□□□ 0.21
RER1-209ENST00000605895 CCDC195A0A1B0GUA6 201 aa16.34■□□□□ 0.21
RER1-209ENST00000605895 TROVE2P10155 538 aaKnown RBP eCLIP16.34■□□□□ 0.215e-7■□□□□ 10.5
RER1-209ENST00000605895 CYP1B1Q16678 543 aa16.34■□□□□ 0.21
RER1-209ENST00000605895 KLHL23Q8NBE8 558 aa16.34■□□□□ 0.21
RER1-209ENST00000605895 EPS8L1Q8TE68 723 aa16.34■□□□□ 0.21
RER1-209ENST00000605895 DENND1AQ8TEH3 1009 aa16.34■□□□□ 0.21
RER1-209ENST00000605895 NSL1Q96IY1 281 aa16.34■□□□□ 0.21
RER1-209ENST00000605895 FNBP1Q96RU3 617 aa16.34■□□□□ 0.21
RER1-209ENST00000605895 CBWD1Q9BRT8 395 aa16.34■□□□□ 0.21
RER1-209ENST00000605895 SPATA16Q9BXB7 569 aa16.34■□□□□ 0.21
RER1-209ENST00000605895 TMEM120AQ9BXJ8 343 aa16.34■□□□□ 0.21
RER1-209ENST00000605895 SYNCQ9H7C4 482 aa16.34■□□□□ 0.21
RER1-209ENST00000605895 ZNF287Q9HBT7 754 aa16.34■□□□□ 0.21
RER1-209ENST00000605895 DNAAF2Q9NVR5 837 aaKnown RBP16.34■□□□□ 0.21
RER1-209ENST00000605895 ZNF148Q9UQR1 794 aa16.34■□□□□ 0.21
RER1-209ENST00000605895 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.33■□□□□ 0.21
RER1-209ENST00000605895 BFSP1Q12934 665 aa16.33■□□□□ 0.21
RER1-209ENST00000605895 PDIA2Q13087 525 aaKnown RBP16.33■□□□□ 0.21
RER1-209ENST00000605895 SATL1Q86VE3 508 aa16.33■□□□□ 0.21
RER1-209ENST00000605895 ERMNQ8TAM6 284 aa16.33■□□□□ 0.21
RER1-209ENST00000605895 PYDC1Q8WXC3 89 aa16.33■□□□□ 0.21
RER1-209ENST00000605895 PSPC1Q8WXF1 523 aaKnown RBP16.33■□□□□ 0.21
RER1-209ENST00000605895 PI4K2AQ9BTU6 479 aa16.33■□□□□ 0.21
RER1-209ENST00000605895 ZBTB21Q9ULJ3 1066 aa16.33■□□□□ 0.21
RER1-209ENST00000605895 COL18A1P39060 1754 aa16.33■□□□□ 0.2
RER1-209ENST00000605895 SNED1Q8TER0 1413 aa16.33■□□□□ 0.2
RER1-209ENST00000605895 SLC16A3O15427 465 aaKnown RBP16.33■□□□□ 0.2
RER1-209ENST00000605895 SORBS2O94875 1100 aaKnown RBP16.33■□□□□ 0.2
RER1-209ENST00000605895 ANXA13P27216 316 aa16.33■□□□□ 0.2
RER1-209ENST00000605895 AP1B1Q10567 949 aa16.33■□□□□ 0.2
RER1-209ENST00000605895 GPS1Q13098 491 aa16.33■□□□□ 0.2
RER1-209ENST00000605895 STAT4Q14765 748 aa16.33■□□□□ 0.2
RER1-209ENST00000605895 KIF22Q14807 665 aa16.33■□□□□ 0.2
RER1-209ENST00000605895 DDB1Q16531 1140 aa16.33■□□□□ 0.2
RER1-209ENST00000605895 HYIQ5T013 277 aa16.33■□□□□ 0.2
RER1-209ENST00000605895 LPCAT4Q643R3 524 aa16.33■□□□□ 0.2
RER1-209ENST00000605895 TBC1D9BQ66K14 1250 aa16.33■□□□□ 0.2
RER1-209ENST00000605895 FOXR2Q6PJQ5 311 aa16.33■□□□□ 0.2
RER1-209ENST00000605895 ZNF513Q8N8E2 541 aaPredicted RBP16.33■□□□□ 0.2
RER1-209ENST00000605895 PPM1HQ9ULR3 514 aa16.33■□□□□ 0.2
RER1-209ENST00000605895 SPIRE1Q08AE8 756 aa16.32■□□□□ 0.2
RER1-209ENST00000605895 CCDC62Q6P9F0 684 aa16.32■□□□□ 0.2
RER1-209ENST00000605895 ATL2Q8NHH9 583 aa16.32■□□□□ 0.2
RER1-209ENST00000605895 CCDC124Q96CT7 223 aaKnown RBP16.32■□□□□ 0.2
RER1-209ENST00000605895 TRAPPC9Q96Q05 1148 aa16.32■□□□□ 0.2
RER1-209ENST00000605895 NMUR2Q9GZQ4 415 aa16.32■□□□□ 0.2
RER1-209ENST00000605895 DMAP1Q9NPF5 467 aaPredicted RBP16.32■□□□□ 0.2
RER1-209ENST00000605895 ANKFY1Q9P2R3 1169 aa16.32■□□□□ 0.2
RER1-209ENST00000605895 SAE1Q9UBE0 346 aaPredicted RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms