RNA–Protein interactions for RNA: ENST00000604689.1

TUBE1-207, Transcript of tubulin epsilon 1, humanhuman

Gene TUBE1, Length 3,610 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-207ENST00000604689 ABCB6Q9NP58 842 aa7.58□□□□□ -1.2
TUBE1-207ENST00000604689 SLC39A2Q9NP94 309 aa7.58□□□□□ -1.2
TUBE1-207ENST00000604689 SLC35C2Q9NQQ7 365 aa7.58□□□□□ -1.2
TUBE1-207ENST00000604689 MAN1C1Q9NR34 630 aa7.58□□□□□ -1.2
TUBE1-207ENST00000604689 MTF2Q9Y483 593 aaPredicted RBP7.58□□□□□ -1.2
TUBE1-207ENST00000604689 SAMM50Q9Y512 469 aa7.58□□□□□ -1.2
TUBE1-207ENST00000604689 FAM208AQ9UK61 1670 aaKnown RBP7.57□□□□□ -1.2
TUBE1-207ENST00000604689 GOLGA8CPA6NN73 597 aa7.57□□□□□ -1.2
TUBE1-207ENST00000604689 CACNB4O00305 520 aaPredicted RBP7.57□□□□□ -1.2
TUBE1-207ENST00000604689 CCNT1O60563 726 aaKnown RBP7.57□□□□□ -1.2
TUBE1-207ENST00000604689 HLA-DRAP01903 254 aa7.57□□□□□ -1.2
TUBE1-207ENST00000604689 PYGMP11217 842 aa7.57□□□□□ -1.2
TUBE1-207ENST00000604689 ARHGDIBP52566 201 aa7.57□□□□□ -1.2
TUBE1-207ENST00000604689 USP14P54578 494 aa7.57□□□□□ -1.2
TUBE1-207ENST00000604689 APBA1Q02410 837 aa7.57□□□□□ -1.2
TUBE1-207ENST00000604689 SGCGQ13326 291 aa7.57□□□□□ -1.2
TUBE1-207ENST00000604689 STX1AQ16623 288 aa7.57□□□□□ -1.2
TUBE1-207ENST00000604689 OLFML2BQ68BL8 750 aa7.57□□□□□ -1.2
TUBE1-207ENST00000604689 ITPRIPL1Q6GPH6 555 aa7.57□□□□□ -1.2
TUBE1-207ENST00000604689 CLVS1Q8IUQ0 354 aaPredicted RBP7.57□□□□□ -1.2
TUBE1-207ENST00000604689 EDC3Q96F86 508 aaKnown RBP7.57□□□□□ -1.2
TUBE1-207ENST00000604689 NLRP3Q96P20 1036 aa7.57□□□□□ -1.2
TUBE1-207ENST00000604689 CCDC106Q9BWC9 280 aa7.57□□□□□ -1.2
TUBE1-207ENST00000604689 FAM204AQ9H8W3 233 aa7.57□□□□□ -1.2
TUBE1-207ENST00000604689 ETNK1Q9HBU6 452 aa7.57□□□□□ -1.2
TUBE1-207ENST00000604689 KLC4Q9NSK0 619 aa7.57□□□□□ -1.2
TUBE1-207ENST00000604689 GJB4Q9NTQ9 266 aa7.57□□□□□ -1.2
TUBE1-207ENST00000604689 ANKEF1Q9NU02 776 aa7.57□□□□□ -1.2
TUBE1-207ENST00000604689 IL1RAPL1Q9NZN1 696 aa7.57□□□□□ -1.2
TUBE1-207ENST00000604689 ARHGAP5Q13017 1502 aa7.57□□□□□ -1.2
TUBE1-207ENST00000604689 AP1G1O43747 822 aa7.57□□□□□ -1.2
TUBE1-207ENST00000604689 PDE5AO76074 875 aa7.57□□□□□ -1.2
TUBE1-207ENST00000604689 YEATS4O95619 227 aa7.57□□□□□ -1.2
TUBE1-207ENST00000604689 HSPA4LO95757 839 aa7.57□□□□□ -1.2
TUBE1-207ENST00000604689 DNTTP04053 509 aa7.57□□□□□ -1.2
TUBE1-207ENST00000604689 CPA3P15088 417 aa7.57□□□□□ -1.2
TUBE1-207ENST00000604689 TARSP26639 723 aaKnown RBP7.57□□□□□ -1.2
TUBE1-207ENST00000604689 IFNA8P32881 189 aa7.57□□□□□ -1.2
TUBE1-207ENST00000604689 RFC4P35249 363 aa7.57□□□□□ -1.2
TUBE1-207ENST00000604689 DIO1P49895 249 aa7.57□□□□□ -1.2
TUBE1-207ENST00000604689 ATN1P54259 1190 aaPredicted RBP7.57□□□□□ -1.2
TUBE1-207ENST00000604689 CTAG1AP78358 180 aa7.57□□□□□ -1.2
TUBE1-207ENST00000604689 TFAP4Q01664 338 aa7.57□□□□□ -1.2
TUBE1-207ENST00000604689 ANO4Q32M45 955 aa7.57□□□□□ -1.2
TUBE1-207ENST00000604689 KRT71Q3SY84 523 aa7.57□□□□□ -1.2
TUBE1-207ENST00000604689 CFAP100Q494V2 611 aa7.57□□□□□ -1.2
TUBE1-207ENST00000604689 CCDC62Q6P9F0 684 aa7.57□□□□□ -1.2
TUBE1-207ENST00000604689 GALNT5Q7Z7M9 940 aa7.57□□□□□ -1.2
TUBE1-207ENST00000604689 GSPT2Q8IYD1 628 aaKnown RBP7.57□□□□□ -1.2
TUBE1-207ENST00000604689 SPARTQ8N0X7 666 aa7.57□□□□□ -1.2
TUBE1-207ENST00000604689 IL17RDQ8NFM7 739 aa7.57□□□□□ -1.2
TUBE1-207ENST00000604689 IFT43Q96FT9 208 aa7.57□□□□□ -1.2
TUBE1-207ENST00000604689 USP28Q96RU2 1077 aa7.57□□□□□ -1.2
TUBE1-207ENST00000604689 AGPAT3Q9NRZ7 376 aa7.57□□□□□ -1.2
TUBE1-207ENST00000604689 C15orf41Q9Y2V0 281 aa7.57□□□□□ -1.2
TUBE1-207ENST00000604689 AP1M2Q9Y6Q5 423 aa7.57□□□□□ -1.2
TUBE1-207ENST00000604689 AHDC1Q5TGY3 1603 aaPredicted RBP7.57□□□□□ -1.2
TUBE1-207ENST00000604689 LOC102724428A0A0B4J2F2 783 aa7.57□□□□□ -1.2
TUBE1-207ENST00000604689 SLC12A8A0AV02 714 aa7.57□□□□□ -1.2
TUBE1-207ENST00000604689 B4E1Z4 1266 aa7.57□□□□□ -1.2
TUBE1-207ENST00000604689 C9IYK1 514 aa7.57□□□□□ -1.2
TUBE1-207ENST00000604689 UBXN8O00124 270 aa7.57□□□□□ -1.2
TUBE1-207ENST00000604689 SYNCRIPO60506 623 aaKnown RBP7.57□□□□□ -1.2
TUBE1-207ENST00000604689 CFBP00751 764 aa7.57□□□□□ -1.2
TUBE1-207ENST00000604689 SLC8A1P32418 973 aa7.57□□□□□ -1.2
TUBE1-207ENST00000604689 SIK1P57059 783 aa7.57□□□□□ -1.2
TUBE1-207ENST00000604689 MRPS25P82663 173 aaKnown RBP7.57□□□□□ -1.2
TUBE1-207ENST00000604689 COTL1Q14019 142 aa7.57□□□□□ -1.2
TUBE1-207ENST00000604689 DPYSQ14117 519 aa7.57□□□□□ -1.2
TUBE1-207ENST00000604689 GEN1Q17RS7 908 aa7.57□□□□□ -1.2
TUBE1-207ENST00000604689 IQSEC1Q6DN90 963 aa7.57□□□□□ -1.2
TUBE1-207ENST00000604689 NXPE1Q8N323 547 aa7.57□□□□□ -1.2
TUBE1-207ENST00000604689 GALNT15Q8N3T1 639 aa7.57□□□□□ -1.2
TUBE1-207ENST00000604689 CCDC12Q8WUD4 166 aaPredicted RBP7.57□□□□□ -1.2
TUBE1-207ENST00000604689 HAUS1Q96CS2 278 aa7.57□□□□□ -1.2
TUBE1-207ENST00000604689 RPRD1AQ96P16 312 aaPredicted RBP7.57□□□□□ -1.2
TUBE1-207ENST00000604689 NT5C1AQ9BXI3 368 aa7.57□□□□□ -1.2
TUBE1-207ENST00000604689 SCAND2PQ9GZW5 306 aaPredicted RBP7.57□□□□□ -1.2
TUBE1-207ENST00000604689 VPS11Q9H270 941 aa7.57□□□□□ -1.2
TUBE1-207ENST00000604689 EHD1Q9H4M9 534 aa7.57□□□□□ -1.2
TUBE1-207ENST00000604689 VCX3AQ9NNX9 186 aa7.57□□□□□ -1.2
TUBE1-207ENST00000604689 KLHL11Q9NVR0 708 aa7.57□□□□□ -1.2
TUBE1-207ENST00000604689 GMIPQ9P107 970 aa7.57□□□□□ -1.2
TUBE1-207ENST00000604689 BAIAP2L1Q9UHR4 511 aa7.57□□□□□ -1.2
TUBE1-207ENST00000604689 SPEF1Q9Y4P9 236 aa7.57□□□□□ -1.2
TUBE1-207ENST00000604689 ADCY9O60503 1353 aa7.56□□□□□ -1.2
TUBE1-207ENST00000604689 FAM170AA1A519 330 aa7.56□□□□□ -1.2
TUBE1-207ENST00000604689 EFCAB8A8MWE9 144 aa7.56□□□□□ -1.2
TUBE1-207ENST00000604689 GALR2O43603 387 aaPredicted RBP7.56□□□□□ -1.2
TUBE1-207ENST00000604689 CDC16Q13042 620 aa7.56□□□□□ -1.2
TUBE1-207ENST00000604689 BEND6Q5SZJ8 279 aaPredicted RBP7.56□□□□□ -1.2
TUBE1-207ENST00000604689 MORN1Q5T089 497 aa7.56□□□□□ -1.2
TUBE1-207ENST00000604689 DESI1Q6ICB0 168 aa7.56□□□□□ -1.2
TUBE1-207ENST00000604689 MIS18BP1Q6P0N0 1132 aa7.56□□□□□ -1.2
TUBE1-207ENST00000604689 IYDQ6PHW0 289 aa7.56□□□□□ -1.2
TUBE1-207ENST00000604689 CEP97Q8IW35 865 aa7.56□□□□□ -1.2
TUBE1-207ENST00000604689 CCDC24Q8N4L8 307 aa7.56□□□□□ -1.2
TUBE1-207ENST00000604689 ZNF565Q8N9K5 539 aa7.56□□□□□ -1.2
TUBE1-207ENST00000604689 MAML1Q92585 1016 aa7.56□□□□□ -1.2
TUBE1-207ENST00000604689 PPP1R16BQ96T49 567 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms