RNA–Protein interactions for RNA: ENST00000604516.1

HMGN3-AS1-201, HMGN3 antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene HMGN3-AS1, Length 2,946 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-AS1-201ENST00000604516 FOXO6A8MYZ6 492 aa12.57□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 H0YCG3 227 aa12.57□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 ACSL3O95573 720 aa12.57□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 NUDT17P0C025 328 aa12.57□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 CHKAP35790 457 aa12.57□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 TCF7P36402 384 aaPredicted RBP12.57□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 EIF3BP55884 814 aaKnown RBP12.57□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 RPL7AP62424 266 aaKnown RBP12.57□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 NOMO3P69849 1222 aa12.57□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 MAMLD1Q13495 774 aa12.57□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 TMEM63BQ5T3F8 832 aa12.57□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 LBX2Q6XYB7 198 aa12.57□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 ABRAQ8N0Z2 381 aa12.57□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 TLCD1Q96CP7 247 aa12.57□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 RIPK2O43353 540 aa12.56□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 TRAPPC3O43617 180 aa12.56□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 CLTAP09496 248 aa12.56□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 ICAM3P32942 547 aa12.56□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 OSTNP61366 133 aa12.56□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 IFT88Q13099 833 aa12.56□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 PACS2Q86VP3 889 aa12.56□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 DNERQ8NFT8 737 aa12.56□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 CCDC114Q96M63 670 aa12.56□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 SELENOSQ9BQE4 189 aa12.56□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 MTMR12Q9C0I1 747 aa12.56□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 MTFR1LQ9H019 292 aa12.56□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 AAASQ9NRG9 546 aa12.56□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 DNAH12Q6ZR08 3092 aa12.56□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 ADGRA2Q96PE1 1338 aa12.56□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 PI4K2BG5E9Z4 385 aa12.56□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 ARIH2O95376 493 aa12.56□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 FNTAP49354 379 aa12.56□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 BPIFB4P59827 614 aa12.56□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 ADCY2Q08462 1091 aa12.56□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 CALCOCO2Q13137 446 aa12.56□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 R3HDM1Q15032 1099 aaKnown RBP12.56□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 HSDL1Q3SXM5 330 aa12.56□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 SLFN12LQ6IEE8 588 aa12.56□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 GADL1Q6ZQY3 521 aa12.56□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 TADA2BQ86TJ2 420 aa12.56□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 CHST13Q8NET6 341 aa12.56□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 BBXQ8WY36 941 aaPredicted RBP12.56□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 NIFKQ9BYG3 293 aaKnown RBP12.56□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 CCDC113Q9H0I3 377 aa12.56□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 AVENQ9NQS1 362 aaPredicted RBP12.56□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 IGKV6D-21A0A0A0MT36 114 aa12.55□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 RGS16O15492 202 aaPredicted RBP12.55□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 ADCY3O60266 1144 aa12.55□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 TARBP2Q15633 366 aaKnown RBP12.55□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 B4GALNT4Q76KP1 1039 aa12.55□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 HOOK3Q86VS8 718 aa12.55□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 EFCAB13Q8IY85 973 aa12.55□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 C12orf50Q8NA57 414 aaPredicted RBP12.55□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 TRAPPC12Q8WVT3 735 aa12.55□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 ZNF606Q8WXB4 792 aa12.55□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 ACSF2Q96CM8 615 aaPredicted RBP12.55□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 IRF6O14896 467 aa12.55□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 TLR3O15455 904 aaKnown RBP12.55□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 PROSCO94903 275 aa12.55□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 WEE2P0C1S8 567 aa12.55□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 RARGP13631 454 aa12.55□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 MYL6P60660 151 aa12.55□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 LONRF1Q17RB8 773 aa12.55□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 ZFYVE27Q5T4F4 411 aa12.55□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 MOB2Q70IA6 237 aa12.55□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 ZNF677Q86XU0 584 aa12.55□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 RNF149Q8NC42 400 aa12.55□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 CGRRF1Q99675 332 aa12.55□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 PLVAPQ9BX97 442 aa12.55□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 ADAM7Q9H2U9 754 aa12.55□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 TMEM51Q9NW97 253 aa12.55□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 CD2APQ9Y5K6 639 aa12.55□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 A0A087WUV0 522 aaPredicted RBP12.55□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 PIGRP01833 764 aa12.55□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 KRT10P13645 584 aa12.55□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 CHN1P15882 459 aa12.55□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 IVDP26440 423 aa12.55□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 BYSLQ13895 437 aaKnown RBP12.55□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 RNF187Q5TA31 235 aaPredicted RBP12.55□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 KAZNQ674X7 775 aa12.55□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 SCARA5Q6ZMJ2 495 aa12.55□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 DCLK3Q9C098 648 aa12.55□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 SPATC1LQ9H0A9 340 aa12.55□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 CDC42EP4Q9H3Q1 356 aaKnown RBP12.55□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 NRBP2Q9NSY0 501 aa12.55□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 PARP2Q9UGN5 583 aa12.55□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 DDX20Q9UHI6 824 aaKnown RBP12.55□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 BRCA1P38398 1863 aaKnown RBP12.54□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 ADM5C9JUS6 153 aa12.54□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 MEFVO15553 781 aaPredicted RBP12.54□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 MSCO60682 206 aa12.54□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 CSDE1O75534 798 aaKnown RBP12.54□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 BRD2P25440 801 aaKnown RBP12.54□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 ADCY8P40145 1251 aa12.54□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 ITGA8P53708 1063 aa12.54□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 PTP4A2Q12974 167 aa12.54□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 THNSL1Q8IYQ7 743 aa12.54□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 CEP120Q8N960 986 aa12.54□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 OTUD5Q96G74 571 aa12.54□□□□□ -0.4
HMGN3-AS1-201ENST00000604516 TSPYL1Q9H0U9 437 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms