RNA–Protein interactions for RNA: ENST00000603043.1

CDCA3-211, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 1,995 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-211ENST00000603043 C9orf57Q5W0N0 161 aa16.82■□□□□ 0.28
CDCA3-211ENST00000603043 CD300LGQ6UXG3 332 aa16.82■□□□□ 0.28
CDCA3-211ENST00000603043 TMC7Q7Z402 723 aa16.82■□□□□ 0.28
CDCA3-211ENST00000603043 USP37Q86T82 979 aa16.82■□□□□ 0.28
CDCA3-211ENST00000603043 RNF168Q8IYW5 571 aaPredicted RBP16.82■□□□□ 0.28
CDCA3-211ENST00000603043 CSGALNACT2Q8N6G5 542 aa16.82■□□□□ 0.28
CDCA3-211ENST00000603043 C1orf127Q8N9H9 656 aa16.82■□□□□ 0.28
CDCA3-211ENST00000603043 PLEKHO2Q8TD55 490 aa16.82■□□□□ 0.28
CDCA3-211ENST00000603043 MICAL1Q8TDZ2 1067 aa16.82■□□□□ 0.28
CDCA3-211ENST00000603043 TRAPPC3O43617 180 aa16.82■□□□□ 0.28
CDCA3-211ENST00000603043 KRT13P13646 458 aa16.82■□□□□ 0.28
CDCA3-211ENST00000603043 IRS1P35568 1242 aa16.82■□□□□ 0.28
CDCA3-211ENST00000603043 ELAVL2Q12926 359 aaKnown RBP16.82■□□□□ 0.28
CDCA3-211ENST00000603043 BMS1Q14692 1282 aaKnown RBP16.82■□□□□ 0.28
CDCA3-211ENST00000603043 TMC2Q8TDI7 906 aa16.82■□□□□ 0.28
CDCA3-211ENST00000603043 CEP63Q96MT8 703 aa16.82■□□□□ 0.28
CDCA3-211ENST00000603043 ZBP1Q9H171 429 aa16.82■□□□□ 0.28
CDCA3-211ENST00000603043 ITGA11Q9UKX5 1188 aa16.82■□□□□ 0.28
CDCA3-211ENST00000603043 REV3LO60673 3130 aa16.82■□□□□ 0.28
CDCA3-211ENST00000603043 ANO9A1A5B4 782 aa16.81■□□□□ 0.28
CDCA3-211ENST00000603043 LRRIQ3A6PVS8 624 aaPredicted RBP16.81■□□□□ 0.28
CDCA3-211ENST00000603043 PIRO00625 290 aa16.81■□□□□ 0.28
CDCA3-211ENST00000603043 PPEF2O14830 753 aa16.81■□□□□ 0.28
CDCA3-211ENST00000603043 FSCN2O14926 492 aa16.81■□□□□ 0.28
CDCA3-211ENST00000603043 ITGB3P05106 788 aa16.81■□□□□ 0.28
CDCA3-211ENST00000603043 VAMP7P51809 220 aa16.81■□□□□ 0.28
CDCA3-211ENST00000603043 DLG4P78352 724 aa16.81■□□□□ 0.28
CDCA3-211ENST00000603043 CLDN10P78369 228 aa16.81■□□□□ 0.28
CDCA3-211ENST00000603043 BFSP1Q12934 665 aa16.81■□□□□ 0.28
CDCA3-211ENST00000603043 TIGD5Q53EQ6 642 aa16.81■□□□□ 0.28
CDCA3-211ENST00000603043 PLPP4Q5VZY2 271 aa16.81■□□□□ 0.28
CDCA3-211ENST00000603043 PDE12Q6L8Q7 609 aaKnown RBP16.81■□□□□ 0.28
CDCA3-211ENST00000603043 HERC2P3Q9BVR0 1158 aa16.81■□□□□ 0.28
CDCA3-211ENST00000603043 NGRNQ9NPE2 291 aaKnown RBP16.81■□□□□ 0.28
CDCA3-211ENST00000603043 PCDHGC5Q9Y5F6 944 aa16.81■□□□□ 0.28
CDCA3-211ENST00000603043 KRT19P08727 400 aa16.8■□□□□ 0.28
CDCA3-211ENST00000603043 CTSAP10619 480 aa16.8■□□□□ 0.28
CDCA3-211ENST00000603043 ERCC5P28715 1186 aaPredicted RBP16.8■□□□□ 0.28
CDCA3-211ENST00000603043 POLR2BP30876 1174 aaKnown RBP16.8■□□□□ 0.28
CDCA3-211ENST00000603043 BRCC3P46736 316 aa16.8■□□□□ 0.28
CDCA3-211ENST00000603043 SMC1AQ14683 1233 aaKnown RBP16.8■□□□□ 0.28
CDCA3-211ENST00000603043 STX1AQ16623 288 aa16.8■□□□□ 0.28
CDCA3-211ENST00000603043 FAM171A1Q5VUB5 890 aa16.8■□□□□ 0.28
CDCA3-211ENST00000603043 KIAA1841Q6NSI8 718 aa16.8■□□□□ 0.28
CDCA3-211ENST00000603043 TAS1R1Q7RTX1 841 aa16.8■□□□□ 0.28
CDCA3-211ENST00000603043 BORCS6Q96GS4 357 aa16.8■□□□□ 0.28
CDCA3-211ENST00000603043 ANO10Q9NW15 660 aa16.8■□□□□ 0.28
CDCA3-211ENST00000603043 I3L4J1 428 aa16.8■□□□□ 0.28
CDCA3-211ENST00000603043 IKBKBO14920 756 aa16.8■□□□□ 0.28
CDCA3-211ENST00000603043 URODP06132 367 aa16.8■□□□□ 0.28
CDCA3-211ENST00000603043 CA8P35219 290 aa16.8■□□□□ 0.28
CDCA3-211ENST00000603043 GLUD2P49448 558 aa16.8■□□□□ 0.28
CDCA3-211ENST00000603043 AP3M2P53677 418 aa16.8■□□□□ 0.28
CDCA3-211ENST00000603043 ENPEPQ07075 957 aa16.8■□□□□ 0.28
CDCA3-211ENST00000603043 USP41Q3LFD5 358 aa16.8■□□□□ 0.28
CDCA3-211ENST00000603043 CT47A1Q5JQC4 288 aaPredicted RBP16.8■□□□□ 0.28
CDCA3-211ENST00000603043 FILIP1Q7Z7B0 1213 aa16.8■□□□□ 0.28
CDCA3-211ENST00000603043 MICALL1Q8N3F8 863 aa16.8■□□□□ 0.28
CDCA3-211ENST00000603043 ZNF516Q92618 1163 aa16.8■□□□□ 0.28
CDCA3-211ENST00000603043 B3GALT6Q96L58 329 aa16.8■□□□□ 0.28
CDCA3-211ENST00000603043 ZNF560Q96MR9 790 aa16.8■□□□□ 0.28
CDCA3-211ENST00000603043 MED15Q96RN5 788 aa16.8■□□□□ 0.28
CDCA3-211ENST00000603043 NSUN3Q9H649 340 aaKnown RBP16.8■□□□□ 0.28
CDCA3-211ENST00000603043 SIX4Q9UIU6 781 aa16.8■□□□□ 0.28
CDCA3-211ENST00000603043 AGAP1Q9UPQ3 857 aa16.8■□□□□ 0.28
CDCA3-211ENST00000603043 R3HCC1Q9Y3T6 440 aaKnown RBP16.8■□□□□ 0.28
CDCA3-211ENST00000603043 TRIM49P0CI25 452 aa16.79■□□□□ 0.28
CDCA3-211ENST00000603043 TRIM49CP0CI26 452 aa16.79■□□□□ 0.28
CDCA3-211ENST00000603043 LILRA4P59901 499 aa16.79■□□□□ 0.28
CDCA3-211ENST00000603043 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.79■□□□□ 0.28
CDCA3-211ENST00000603043 TRAPPC11Q7Z392 1133 aa16.79■□□□□ 0.28
CDCA3-211ENST00000603043 CEP57Q86XR8 500 aa16.79■□□□□ 0.28
CDCA3-211ENST00000603043 CXorf38Q8TB03 319 aa16.79■□□□□ 0.28
CDCA3-211ENST00000603043 AUTS2Q8WXX7 1259 aa16.79■□□□□ 0.28
CDCA3-211ENST00000603043 TTPALQ9BTX7 342 aa16.79■□□□□ 0.28
CDCA3-211ENST00000603043 SRRTQ9BXP5 876 aaKnown RBP16.79■□□□□ 0.28
CDCA3-211ENST00000603043 MRPL17Q9NRX2 175 aaKnown RBP16.79■□□□□ 0.28
CDCA3-211ENST00000603043 CHST7Q9NS84 486 aa16.79■□□□□ 0.28
CDCA3-211ENST00000603043 ARMCX3Q9UH62 379 aaPredicted RBP16.79■□□□□ 0.28
CDCA3-211ENST00000603043 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.78■□□□□ 0.28
CDCA3-211ENST00000603043 HIDE1A8MVS5 230 aa16.78■□□□□ 0.28
CDCA3-211ENST00000603043 C2CD2LO14523 706 aa16.78■□□□□ 0.28
CDCA3-211ENST00000603043 LETM1O95202 739 aaPredicted RBP16.78■□□□□ 0.28
CDCA3-211ENST00000603043 FGFR1OPO95684 399 aaKnown RBP16.78■□□□□ 0.28
CDCA3-211ENST00000603043 PNPLA4P41247 253 aa16.78■□□□□ 0.28
CDCA3-211ENST00000603043 AARSP49588 968 aaKnown RBP eCLIP16.78■□□□□ 0.28
CDCA3-211ENST00000603043 TAF6P49848 677 aa16.78■□□□□ 0.28
CDCA3-211ENST00000603043 RBP5P82980 135 aa16.78■□□□□ 0.28
CDCA3-211ENST00000603043 TYRO3Q06418 890 aa16.78■□□□□ 0.28
CDCA3-211ENST00000603043 PTPN14Q15678 1187 aa16.78■□□□□ 0.28
CDCA3-211ENST00000603043 CCDC40Q4G0X9 1142 aa16.78■□□□□ 0.28
CDCA3-211ENST00000603043 SCARA3Q6AZY7 606 aa16.78■□□□□ 0.28
CDCA3-211ENST00000603043 MRPL43Q8N983 215 aaKnown RBP16.78■□□□□ 0.28
CDCA3-211ENST00000603043 SUSD3Q96L08 255 aa16.78■□□□□ 0.28
CDCA3-211ENST00000603043 IRAK3Q9Y616 596 aa16.78■□□□□ 0.28
CDCA3-211ENST00000603043 GOLGA6L3A6NEY3 463 aa16.78■□□□□ 0.28
CDCA3-211ENST00000603043 CXCL14O95715 111 aa16.78■□□□□ 0.28
CDCA3-211ENST00000603043 FGFR3P22607 806 aa16.78■□□□□ 0.28
CDCA3-211ENST00000603043 DSG1Q02413 1049 aa16.78■□□□□ 0.28
CDCA3-211ENST00000603043 BIRC3Q13489 604 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms