RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 CC2D1AQ6P1N0 951 aaPredicted RBP18.64■□□□□ 0.58
PPFIA3-207ENST00000602716 ALKAL1Q6UXT8 129 aa18.64■□□□□ 0.58
PPFIA3-207ENST00000602716 OLIG1Q8TAK6 271 aa18.64■□□□□ 0.58
PPFIA3-207ENST00000602716 ANKRD36BP1Q96IX9 119 aa18.64■□□□□ 0.58
PPFIA3-207ENST00000602716 ZFP42Q96MM3 310 aa18.64■□□□□ 0.58
PPFIA3-207ENST00000602716 STK33Q9BYT3 514 aa18.64■□□□□ 0.58
PPFIA3-207ENST00000602716 XYLT2Q9H1B5 865 aa18.64■□□□□ 0.58
PPFIA3-207ENST00000602716 ASB7Q9H672 318 aa18.64■□□□□ 0.58
PPFIA3-207ENST00000602716 CNTN3Q9P232 1028 aa18.64■□□□□ 0.58
PPFIA3-207ENST00000602716 REXO2Q9Y3B8 237 aaKnown RBP18.64■□□□□ 0.58
PPFIA3-207ENST00000602716 FOXN3O00409 490 aaPredicted RBP18.64■□□□□ 0.57
PPFIA3-207ENST00000602716 PPEF2O14830 753 aa18.64■□□□□ 0.57
PPFIA3-207ENST00000602716 CALCAP01258 141 aa18.64■□□□□ 0.57
PPFIA3-207ENST00000602716 TNNC2P02585 160 aa18.64■□□□□ 0.57
PPFIA3-207ENST00000602716 ITGB3P05106 788 aa18.64■□□□□ 0.57
PPFIA3-207ENST00000602716 SELPP16109 830 aa18.64■□□□□ 0.57
PPFIA3-207ENST00000602716 TLE2Q04725 743 aa18.64■□□□□ 0.57
PPFIA3-207ENST00000602716 FAAP100Q0VG06 881 aa18.64■□□□□ 0.57
PPFIA3-207ENST00000602716 ASIC2Q16515 512 aa18.64■□□□□ 0.57
PPFIA3-207ENST00000602716 IRF2BP2Q7Z5L9 587 aa18.64■□□□□ 0.57
PPFIA3-207ENST00000602716 APBB1IPQ7Z5R6 666 aaPredicted RBP18.64■□□□□ 0.57
PPFIA3-207ENST00000602716 CAGE1Q8TC20 777 aa18.64■□□□□ 0.57
PPFIA3-207ENST00000602716 PAWRQ96IZ0 340 aaKnown RBP18.64■□□□□ 0.57
PPFIA3-207ENST00000602716 NHEJ1Q9H9Q4 299 aaPredicted RBP18.64■□□□□ 0.57
PPFIA3-207ENST00000602716 ACP6Q9NPH0 428 aa18.64■□□□□ 0.57
PPFIA3-207ENST00000602716 C1orf112Q9NSG2 853 aa18.64■□□□□ 0.57
PPFIA3-207ENST00000602716 AIPL1Q9NZN9 384 aa18.64■□□□□ 0.57
PPFIA3-207ENST00000602716 CLSTN1O94985 981 aa18.63■□□□□ 0.57
PPFIA3-207ENST00000602716 ASS1P00966 412 aaKnown RBP18.63■□□□□ 0.57
PPFIA3-207ENST00000602716 SOX5P35711 763 aa18.63■□□□□ 0.57
PPFIA3-207ENST00000602716 EIF4A3P38919 411 aaKnown RBP18.63■□□□□ 0.57
PPFIA3-207ENST00000602716 AP3M2P53677 418 aa18.63■□□□□ 0.57
PPFIA3-207ENST00000602716 POU5F1Q01860 360 aaKnown RBP18.63■□□□□ 0.57
PPFIA3-207ENST00000602716 ANKRD33Q7Z3H0 272 aa18.63■□□□□ 0.57
PPFIA3-207ENST00000602716 SCLYQ96I15 445 aa18.63■□□□□ 0.57
PPFIA3-207ENST00000602716 ADAM2Q99965 735 aa18.63■□□□□ 0.57
PPFIA3-207ENST00000602716 PARD6BQ9BYG5 372 aa18.63■□□□□ 0.57
PPFIA3-207ENST00000602716 PTGESO14684 152 aa18.62■□□□□ 0.57
PPFIA3-207ENST00000602716 EVI5O60447 810 aa18.62■□□□□ 0.57
PPFIA3-207ENST00000602716 KRT19P08727 400 aa18.62■□□□□ 0.57
PPFIA3-207ENST00000602716 YARSP54577 528 aaKnown RBP18.62■□□□□ 0.57
PPFIA3-207ENST00000602716 SOX4Q06945 474 aaPredicted RBP18.62■□□□□ 0.57
PPFIA3-207ENST00000602716 TDRD12Q587J7 1177 aaKnown RBP18.62■□□□□ 0.57
PPFIA3-207ENST00000602716 IFIH1Q9BYX4 1025 aaKnown RBP18.62■□□□□ 0.57
PPFIA3-207ENST00000602716 PPP1R12CQ9BZL4 782 aa18.62■□□□□ 0.57
PPFIA3-207ENST00000602716 MCOLN1Q9GZU1 580 aa18.62■□□□□ 0.57
PPFIA3-207ENST00000602716 WNT8AQ9H1J5 351 aa18.62■□□□□ 0.57
PPFIA3-207ENST00000602716 GOLGA2P5Q9HBQ8 144 aa18.62■□□□□ 0.57
PPFIA3-207ENST00000602716 ZNHIT6Q9NWK9 470 aaKnown RBP18.62■□□□□ 0.57
PPFIA3-207ENST00000602716 CDC23Q9UJX2 597 aa18.62■□□□□ 0.57
PPFIA3-207ENST00000602716 ATP11BQ9Y2G3 1177 aa18.62■□□□□ 0.57
PPFIA3-207ENST00000602716 C2CD2Q9Y426 696 aa18.62■□□□□ 0.57
PPFIA3-207ENST00000602716 ZNF263O14978 683 aa18.62■□□□□ 0.57
PPFIA3-207ENST00000602716 RFX1P22670 979 aa18.62■□□□□ 0.57
PPFIA3-207ENST00000602716 POLR2BP30876 1174 aaKnown RBP18.62■□□□□ 0.57
PPFIA3-207ENST00000602716 TUBB2AQ13885 445 aa18.62■□□□□ 0.57
PPFIA3-207ENST00000602716 LRRC26Q2I0M4 334 aa18.62■□□□□ 0.57
PPFIA3-207ENST00000602716 TSR1Q2NL82 804 aaKnown RBP18.62■□□□□ 0.57
PPFIA3-207ENST00000602716 ZNF569Q5MCW4 686 aa18.62■□□□□ 0.57
PPFIA3-207ENST00000602716 SCARA5Q6ZMJ2 495 aa18.62■□□□□ 0.57
PPFIA3-207ENST00000602716 AGMOQ6ZNB7 445 aa18.62■□□□□ 0.57
PPFIA3-207ENST00000602716 RTN4RL1Q86UN2 441 aaPredicted RBP18.62■□□□□ 0.57
PPFIA3-207ENST00000602716 SHC3Q92529 594 aa18.62■□□□□ 0.57
PPFIA3-207ENST00000602716 SYN2Q92777 582 aaPredicted RBP18.62■□□□□ 0.57
PPFIA3-207ENST00000602716 TUBB2BQ9BVA1 445 aa18.62■□□□□ 0.57
PPFIA3-207ENST00000602716 UBXN6Q9BZV1 441 aa18.62■□□□□ 0.57
PPFIA3-207ENST00000602716 HAUS4Q9H6D7 363 aa18.62■□□□□ 0.57
PPFIA3-207ENST00000602716 CHST12Q9NRB3 414 aa18.62■□□□□ 0.57
PPFIA3-207ENST00000602716 CACNG4Q9UBN1 327 aa18.62■□□□□ 0.57
PPFIA3-207ENST00000602716 POLIQ9UNA4 740 aa18.62■□□□□ 0.57
PPFIA3-207ENST00000602716 TFR2Q9UP52 801 aa18.62■□□□□ 0.57
PPFIA3-207ENST00000602716 SMIM28A0A1B0GU29 152 aa18.61■□□□□ 0.57
PPFIA3-207ENST00000602716 FAM170AA1A519 330 aa18.61■□□□□ 0.57
PPFIA3-207ENST00000602716 ZC3H11AO75152 810 aaKnown RBP eCLIP18.61■□□□□ 0.57
PPFIA3-207ENST00000602716 SASH3O75995 380 aa18.61■□□□□ 0.57
PPFIA3-207ENST00000602716 MLH1P40692 756 aa18.61■□□□□ 0.57
PPFIA3-207ENST00000602716 STAT1P42224 750 aa18.61■□□□□ 0.57
PPFIA3-207ENST00000602716 CDK17Q00537 523 aa18.61■□□□□ 0.57
PPFIA3-207ENST00000602716 ZBTB6Q15916 424 aa18.61■□□□□ 0.57
PPFIA3-207ENST00000602716 XKR4Q5GH76 650 aa18.61■□□□□ 0.57
PPFIA3-207ENST00000602716 ZNF571Q7Z3V5 609 aaPredicted RBP18.61■□□□□ 0.57
PPFIA3-207ENST00000602716 RNF169Q8NCN4 708 aa18.61■□□□□ 0.57
PPFIA3-207ENST00000602716 SEZ6LQ9BYH1 1024 aa18.61■□□□□ 0.57
PPFIA3-207ENST00000602716 PLEKHA5Q9HAU0 1116 aa18.61■□□□□ 0.57
PPFIA3-207ENST00000602716 MYO6Q9UM54 1294 aa18.61■□□□□ 0.57
PPFIA3-207ENST00000602716 CITO14578 2027 aa18.61■□□□□ 0.57
PPFIA3-207ENST00000602716 NDUFA10O95299 355 aa18.61■□□□□ 0.57
PPFIA3-207ENST00000602716 ARHGAP25P42331 645 aa18.61■□□□□ 0.57
PPFIA3-207ENST00000602716 CCL23P55773 120 aa18.61■□□□□ 0.57
PPFIA3-207ENST00000602716 GCNT1Q02742 428 aa18.61■□□□□ 0.57
PPFIA3-207ENST00000602716 PTK2Q05397 1052 aa18.61■□□□□ 0.57
PPFIA3-207ENST00000602716 KLHL30Q0D2K2 578 aa18.61■□□□□ 0.57
PPFIA3-207ENST00000602716 TRPC3Q13507 836 aa18.61■□□□□ 0.57
PPFIA3-207ENST00000602716 BFSP2Q13515 415 aa18.61■□□□□ 0.57
PPFIA3-207ENST00000602716 ASTE1Q2TB18 679 aaPredicted RBP18.61■□□□□ 0.57
PPFIA3-207ENST00000602716 ZNF699Q32M78 642 aa18.61■□□□□ 0.57
PPFIA3-207ENST00000602716 WDR44Q5JSH3 913 aa18.61■□□□□ 0.57
PPFIA3-207ENST00000602716 CEP112Q8N8E3 955 aa18.61■□□□□ 0.57
PPFIA3-207ENST00000602716 GSTCDQ8NEC7 633 aa18.61■□□□□ 0.57
PPFIA3-207ENST00000602716 NUCKS1Q9H1E3 243 aaKnown RBP18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms