RNA–Protein interactions for RNA: ENST00000602223.5

STRN4-223, Transcript of striatin 4, human

TSL 4

Gene STRN4, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRN4-223	ENST00000602223	GCNT3	O95395	438 aa		13.48	□□□□□ -0.25
STRN4-223	ENST00000602223	ASGR2	P07307	311 aa		13.48	□□□□□ -0.25
STRN4-223	ENST00000602223	HNRNPA1	P09651	372 aa	Known RBP eCLIP	13.48	□□□□□ -0.25
STRN4-223	ENST00000602223	AARS	P49588	968 aa	Known RBP eCLIP	13.48	□□□□□ -0.25
STRN4-223	ENST00000602223	ACOT2	P49753	483 aa		13.48	□□□□□ -0.25
STRN4-223	ENST00000602223	CASP5	P51878	434 aa		13.48	□□□□□ -0.25
STRN4-223	ENST00000602223	POU5F1	Q01860	360 aa	Known RBP	13.48	□□□□□ -0.25
STRN4-223	ENST00000602223	ROR1	Q01973	937 aa		13.48	□□□□□ -0.25
STRN4-223	ENST00000602223	KCNA1	Q09470	495 aa		13.48	□□□□□ -0.25
STRN4-223	ENST00000602223	MTMR3	Q13615	1198 aa		13.48	□□□□□ -0.25
STRN4-223	ENST00000602223	ALCAM	Q13740	583 aa		13.48	□□□□□ -0.25
STRN4-223	ENST00000602223	POSTN	Q15063	836 aa		13.48	□□□□□ -0.25
STRN4-223	ENST00000602223	UVSSA	Q2YD98	709 aa		13.48	□□□□□ -0.25
STRN4-223	ENST00000602223	PPM1L	Q5SGD2	360 aa		13.48	□□□□□ -0.25
STRN4-223	ENST00000602223	SPATA1	Q5VX52	437 aa		13.48	□□□□□ -0.25
STRN4-223	ENST00000602223	JADE1	Q6IE81	842 aa		13.48	□□□□□ -0.25
STRN4-223	ENST00000602223	ASIC4	Q96FT7	647 aa		13.48	□□□□□ -0.25
STRN4-223	ENST00000602223	ACCS	Q96QU6	501 aa		13.48	□□□□□ -0.25
STRN4-223	ENST00000602223	LRRC27	Q9C0I9	530 aa		13.48	□□□□□ -0.25
STRN4-223	ENST00000602223	PCDHB8	Q9UN66	801 aa		13.48	□□□□□ -0.25
STRN4-223	ENST00000602223	EXOC7	Q9UPT5	735 aa		13.48	□□□□□ -0.25
STRN4-223	ENST00000602223	ARIH1	Q9Y4X5	557 aa	Predicted RBP	13.48	□□□□□ -0.25
STRN4-223	ENST00000602223	WDR27	A2RRH5	827 aa		13.47	□□□□□ -0.25
STRN4-223	ENST00000602223		H7C4K7	107 aa		13.47	□□□□□ -0.25
STRN4-223	ENST00000602223		M0QZQ0	153 aa		13.47	□□□□□ -0.25
STRN4-223	ENST00000602223	NFIC	P08651	508 aa		13.47	□□□□□ -0.25
STRN4-223	ENST00000602223	POU2F2	P09086	479 aa		13.47	□□□□□ -0.25
STRN4-223	ENST00000602223	ADSS	P30520	456 aa		13.47	□□□□□ -0.25
STRN4-223	ENST00000602223	GUCY2F	P51841	1108 aa		13.47	□□□□□ -0.25
STRN4-223	ENST00000602223	DNM1	Q05193	864 aa	Known RBP	13.47	□□□□□ -0.25
STRN4-223	ENST00000602223	CRELD2	Q6UXH1	353 aa	Predicted RBP	13.47	□□□□□ -0.25
STRN4-223	ENST00000602223	RTL10	Q7L3V2	364 aa		13.47	□□□□□ -0.25
STRN4-223	ENST00000602223	CCDC65	Q8IXS2	484 aa		13.47	□□□□□ -0.25
STRN4-223	ENST00000602223	UBALD2	Q8IYN6	164 aa		13.47	□□□□□ -0.25
STRN4-223	ENST00000602223	IQUB	Q8NA54	791 aa		13.47	□□□□□ -0.25
STRN4-223	ENST00000602223	APPL2	Q8NEU8	664 aa		13.47	□□□□□ -0.25
STRN4-223	ENST00000602223	BEST2	Q8NFU1	509 aa		13.47	□□□□□ -0.25
STRN4-223	ENST00000602223	SLC7A14	Q8TBB6	771 aa		13.47	□□□□□ -0.25
STRN4-223	ENST00000602223	POMGNT1	Q8WZA1	660 aa		13.47	□□□□□ -0.25
STRN4-223	ENST00000602223	DHX58	Q96C10	678 aa		13.47	□□□□□ -0.25
STRN4-223	ENST00000602223	FAM212A	Q96EL1	285 aa		13.47	□□□□□ -0.25
STRN4-223	ENST00000602223	MFSD14A	Q96MC6	490 aa		13.47	□□□□□ -0.25
STRN4-223	ENST00000602223	MYADM	Q96S97	322 aa		13.47	□□□□□ -0.25
STRN4-223	ENST00000602223	FGFBP2	Q9BYJ0	223 aa		13.47	□□□□□ -0.25
STRN4-223	ENST00000602223	TRIM9	Q9C026	710 aa		13.47	□□□□□ -0.25
STRN4-223	ENST00000602223	ASB7	Q9H672	318 aa		13.47	□□□□□ -0.25
STRN4-223	ENST00000602223	EPS15L1	Q9UBC2	864 aa		13.47	□□□□□ -0.25
STRN4-223	ENST00000602223	FBXL5	Q9UKA1	691 aa		13.47	□□□□□ -0.25
STRN4-223	ENST00000602223	CFAP45	Q9UL16	551 aa		13.47	□□□□□ -0.25
STRN4-223	ENST00000602223	PCDHA7	Q9UN72	937 aa		13.47	□□□□□ -0.25
STRN4-223	ENST00000602223	DERA	Q9Y315	318 aa		13.47	□□□□□ -0.25
STRN4-223	ENST00000602223	PCDHB13	Q9Y5F0	798 aa		13.47	□□□□□ -0.25
STRN4-223	ENST00000602223	MUC6	Q6W4X9	2439 aa		13.47	□□□□□ -0.25
STRN4-223	ENST00000602223	PPEF2	O14830	753 aa		13.46	□□□□□ -0.25
STRN4-223	ENST00000602223	CCL16	O15467	120 aa		13.46	□□□□□ -0.25
STRN4-223	ENST00000602223	ABLIM3	O94929	683 aa		13.46	□□□□□ -0.25
STRN4-223	ENST00000602223	GBP2	P32456	591 aa	Predicted RBP	13.46	□□□□□ -0.25
STRN4-223	ENST00000602223	AMPD3	Q01432	767 aa		13.46	□□□□□ -0.25
STRN4-223	ENST00000602223	TMEM132D	Q14C87	1099 aa		13.46	□□□□□ -0.25
STRN4-223	ENST00000602223	CTXN3	Q4LDR2	81 aa		13.46	□□□□□ -0.25
STRN4-223	ENST00000602223	ZNF280D	Q6N043	979 aa		13.46	□□□□□ -0.25
STRN4-223	ENST00000602223	CNNM4	Q6P4Q7	775 aa		13.46	□□□□□ -0.25
STRN4-223	ENST00000602223	GRASP	Q7Z6J2	395 aa	Predicted RBP	13.46	□□□□□ -0.25
STRN4-223	ENST00000602223	ZNF461	Q8TAF7	563 aa		13.46	□□□□□ -0.25
STRN4-223	ENST00000602223	PBXIP1	Q96AQ6	731 aa		13.46	□□□□□ -0.25
STRN4-223	ENST00000602223	SMOC2	Q9H3U7	446 aa		13.46	□□□□□ -0.25
STRN4-223	ENST00000602223	RCOR1	Q9UKL0	485 aa		13.46	□□□□□ -0.25
STRN4-223	ENST00000602223	C2CD2	Q9Y426	696 aa		13.46	□□□□□ -0.25
STRN4-223	ENST00000602223	ANO9	A1A5B4	782 aa		13.45	□□□□□ -0.26
STRN4-223	ENST00000602223	ARHGEF37	A1IGU5	675 aa		13.45	□□□□□ -0.26
STRN4-223	ENST00000602223	PIR	O00625	290 aa		13.45	□□□□□ -0.26
STRN4-223	ENST00000602223	POLR2D	O15514	142 aa	Known RBP	13.45	□□□□□ -0.26
STRN4-223	ENST00000602223	XYLB	O75191	536 aa		13.45	□□□□□ -0.26
STRN4-223	ENST00000602223	PRPF6	O94906	941 aa	Known RBP	13.45	□□□□□ -0.26
STRN4-223	ENST00000602223	ATF2	P15336	505 aa		13.45	□□□□□ -0.26
STRN4-223	ENST00000602223	GART	P22102	1010 aa		13.45	□□□□□ -0.26
STRN4-223	ENST00000602223	ME1	P48163	572 aa		13.45	□□□□□ -0.26
STRN4-223	ENST00000602223	YWHAH	Q04917	246 aa	Predicted RBP	13.45	□□□□□ -0.26
STRN4-223	ENST00000602223	C9orf57	Q5W0N0	161 aa		13.45	□□□□□ -0.26
STRN4-223	ENST00000602223	RESP18	Q5W5W9	173 aa		13.45	□□□□□ -0.26
STRN4-223	ENST00000602223	GET4	Q7L5D6	327 aa	Predicted RBP	13.45	□□□□□ -0.26
STRN4-223	ENST00000602223	C7orf25	Q9BPX7	421 aa		13.45	□□□□□ -0.26
STRN4-223	ENST00000602223	TMEM206	Q9H813	350 aa		13.45	□□□□□ -0.26
STRN4-223	ENST00000602223	MAGEF1	Q9HAY2	307 aa		13.45	□□□□□ -0.26
STRN4-223	ENST00000602223	KCNK12	Q9HB15	430 aa		13.45	□□□□□ -0.26
STRN4-223	ENST00000602223	FAM13B	Q9NYF5	915 aa		13.45	□□□□□ -0.26
STRN4-223	ENST00000602223	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	13.45	□□□□□ -0.26
STRN4-223	ENST00000602223	IGSF9	Q9P2J2	1179 aa		13.45	□□□□□ -0.26
STRN4-223	ENST00000602223	ZDHHC9	Q9Y397	364 aa		13.45	□□□□□ -0.26
STRN4-223	ENST00000602223	WDFY4	Q6ZS81	3184 aa		13.44	□□□□□ -0.26
STRN4-223	ENST00000602223	OAZ2	O95190	189 aa		13.44	□□□□□ -0.26
STRN4-223	ENST00000602223	IL18RAP	O95256	599 aa		13.44	□□□□□ -0.26
STRN4-223	ENST00000602223	LDHA	P00338	332 aa	Known RBP	13.44	□□□□□ -0.26
STRN4-223	ENST00000602223	TYMP	P19971	482 aa		13.44	□□□□□ -0.26
STRN4-223	ENST00000602223	PAX3	P23760	479 aa		13.44	□□□□□ -0.26
STRN4-223	ENST00000602223	FSHR	P23945	695 aa		13.44	□□□□□ -0.26
STRN4-223	ENST00000602223	ELF1	P32519	619 aa		13.44	□□□□□ -0.26
STRN4-223	ENST00000602223	ARPP19	P56211	112 aa		13.44	□□□□□ -0.26
STRN4-223	ENST00000602223	LILRA4	P59901	499 aa		13.44	□□□□□ -0.26
STRN4-223	ENST00000602223	NTHL1	P78549	312 aa		13.44	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms