RNA–Protein interactions for RNA: ENST00000601614.6

SSBP4-211, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 628 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-211ENST00000601614 NAP1L4Q99733 375 aaKnown RBP17.63■□□□□ 0.41
SSBP4-211ENST00000601614 ADPGKQ9BRR6 497 aa17.63■□□□□ 0.41
SSBP4-211ENST00000601614 KIFC3Q9BVG8 833 aa17.63■□□□□ 0.41
SSBP4-211ENST00000601614 ARRDC1-AS1Q9H2J1 176 aa17.63■□□□□ 0.41
SSBP4-211ENST00000601614 TTC12Q9H892 705 aaPredicted RBP17.63■□□□□ 0.41
SSBP4-211ENST00000601614 TRPV4Q9HBA0 871 aa17.63■□□□□ 0.41
SSBP4-211ENST00000601614 ZSWIM6Q9HCJ5 1215 aa17.63■□□□□ 0.41
SSBP4-211ENST00000601614 FBXL5Q9UKA1 691 aa17.63■□□□□ 0.41
SSBP4-211ENST00000601614 AXIN1O15169 862 aa17.62■□□□□ 0.41
SSBP4-211ENST00000601614 TRAPPC3O43617 180 aa17.62■□□□□ 0.41
SSBP4-211ENST00000601614 MYL4P12829 197 aa17.62■□□□□ 0.41
SSBP4-211ENST00000601614 ATP2B1P20020 1258 aa17.62■□□□□ 0.41
SSBP4-211ENST00000601614 EPHA5P54756 1037 aa17.62■□□□□ 0.41
SSBP4-211ENST00000601614 MRPL58Q14197 206 aaKnown RBP17.62■□□□□ 0.41
SSBP4-211ENST00000601614 CYP4A22Q5TCH4 519 aa17.62■□□□□ 0.41
SSBP4-211ENST00000601614 NT5DC1Q5TFE4 455 aa17.62■□□□□ 0.41
SSBP4-211ENST00000601614 CEP68Q76N32 757 aa17.62■□□□□ 0.41
SSBP4-211ENST00000601614 GPIHBP1Q8IV16 184 aa17.62■□□□□ 0.41
SSBP4-211ENST00000601614 SHKBP1Q8TBC3 707 aa17.62■□□□□ 0.41
SSBP4-211ENST00000601614 TNFRSF25Q93038 417 aa17.62■□□□□ 0.41
SSBP4-211ENST00000601614 UROC1Q96N76 676 aa17.62■□□□□ 0.41
SSBP4-211ENST00000601614 C2orf40Q9H1Z8 148 aa17.62■□□□□ 0.41
SSBP4-211ENST00000601614 IGF2RP11717 2491 aa17.62■□□□□ 0.41
SSBP4-211ENST00000601614 SMIM28A0A1B0GU29 152 aa17.61■□□□□ 0.41
SSBP4-211ENST00000601614 MLLT6P55198 1093 aaPredicted RBP17.61■□□□□ 0.41
SSBP4-211ENST00000601614 SCRN1Q12765 414 aa17.61■□□□□ 0.41
SSBP4-211ENST00000601614 TWF1Q12792 350 aa17.61■□□□□ 0.41
SSBP4-211ENST00000601614 CALCRLQ16602 461 aa17.61■□□□□ 0.41
SSBP4-211ENST00000601614 DCAF4L1Q3SXM0 396 aa17.61■□□□□ 0.41
SSBP4-211ENST00000601614 WDR5BQ86VZ2 330 aa17.61■□□□□ 0.41
SSBP4-211ENST00000601614 MCPH1Q8NEM0 835 aa17.61■□□□□ 0.41
SSBP4-211ENST00000601614 TTC8Q8TAM2 541 aa17.61■□□□□ 0.41
SSBP4-211ENST00000601614 ZMAT2Q96NC0 199 aaKnown RBP17.61■□□□□ 0.41
SSBP4-211ENST00000601614 LRRC3BQ96PB8 259 aa17.61■□□□□ 0.41
SSBP4-211ENST00000601614 SMOC1Q9H4F8 434 aa17.61■□□□□ 0.41
SSBP4-211ENST00000601614 POLD4Q9HCU8 107 aa17.61■□□□□ 0.41
SSBP4-211ENST00000601614 C1QTNF9BB2RNN3 333 aa17.6■□□□□ 0.41
SSBP4-211ENST00000601614 SPECC1L-ADORA2AF8WAN1 911 aa17.6■□□□□ 0.41
SSBP4-211ENST00000601614 FOXD2O60548 495 aaPredicted RBP17.6■□□□□ 0.41
SSBP4-211ENST00000601614 MED24O75448 989 aa17.6■□□□□ 0.41
SSBP4-211ENST00000601614 PROS1P07225 676 aa17.6■□□□□ 0.41
SSBP4-211ENST00000601614 ZNF806P0C7X5 589 aa17.6■□□□□ 0.41
SSBP4-211ENST00000601614 C1QTNF9P0C862 333 aa17.6■□□□□ 0.41
SSBP4-211ENST00000601614 XRCC6P12956 609 aaKnown RBP eCLIP17.6■□□□□ 0.41
SSBP4-211ENST00000601614 CTHP32929 405 aa17.6■□□□□ 0.41
SSBP4-211ENST00000601614 TXKP42681 527 aa17.6■□□□□ 0.41
SSBP4-211ENST00000601614 LRRC32Q14392 662 aa17.6■□□□□ 0.41
SSBP4-211ENST00000601614 XKR4Q5GH76 650 aa17.6■□□□□ 0.41
SSBP4-211ENST00000601614 STXBP5Q5T5C0 1151 aa17.6■□□□□ 0.41
SSBP4-211ENST00000601614 STPG1Q5TH74 334 aa17.6■□□□□ 0.41
SSBP4-211ENST00000601614 PKN3Q6P5Z2 889 aa17.6■□□□□ 0.41
SSBP4-211ENST00000601614 ALKAL1Q6UXT8 129 aa17.6■□□□□ 0.41
SSBP4-211ENST00000601614 CSGALNACT1Q8TDX6 532 aa17.6■□□□□ 0.41
SSBP4-211ENST00000601614 LRRC3Q9BY71 257 aa17.6■□□□□ 0.41
SSBP4-211ENST00000601614 STK36Q9NRP7 1315 aa17.59■□□□□ 0.41
SSBP4-211ENST00000601614 MYBPHLA2RUH7 354 aa17.59■□□□□ 0.41
SSBP4-211ENST00000601614 PODXLO00592 558 aa17.59■□□□□ 0.41
SSBP4-211ENST00000601614 SYN3O14994 580 aa17.59■□□□□ 0.41
SSBP4-211ENST00000601614 CHADO15335 359 aa17.59■□□□□ 0.41
SSBP4-211ENST00000601614 EXTL3O43909 919 aa17.59■□□□□ 0.41
SSBP4-211ENST00000601614 KCNK5O95279 499 aa17.59■□□□□ 0.41
SSBP4-211ENST00000601614 VNN2O95498 520 aa17.59■□□□□ 0.41
SSBP4-211ENST00000601614 HOXA6P31267 233 aa17.59■□□□□ 0.41
SSBP4-211ENST00000601614 NAMPTP43490 491 aa17.59■□□□□ 0.41
SSBP4-211ENST00000601614 RAP1GAPP47736 663 aa17.59■□□□□ 0.41
SSBP4-211ENST00000601614 PXNP49023 591 aaPredicted RBP17.59■□□□□ 0.41
SSBP4-211ENST00000601614 KPNA1P52294 538 aaPredicted RBP17.59■□□□□ 0.41
SSBP4-211ENST00000601614 FCHO2Q0JRZ9 810 aa17.59■□□□□ 0.41
SSBP4-211ENST00000601614 CCINQ13939 588 aa17.59■□□□□ 0.41
SSBP4-211ENST00000601614 CTXN3Q4LDR2 81 aa17.59■□□□□ 0.41
SSBP4-211ENST00000601614 ATF7IP2Q5U623 682 aa17.59■□□□□ 0.41
SSBP4-211ENST00000601614 TPGS2Q68CL5 300 aa17.59■□□□□ 0.41
SSBP4-211ENST00000601614 IQCEQ6IPM2 695 aa17.59■□□□□ 0.41
SSBP4-211ENST00000601614 CPLX2Q6PUV4 134 aaKnown RBP17.59■□□□□ 0.41
SSBP4-211ENST00000601614 KBTBD6Q86V97 674 aa17.59■□□□□ 0.41
SSBP4-211ENST00000601614 CATSPER3Q86XQ3 398 aa17.59■□□□□ 0.41
SSBP4-211ENST00000601614 TMEM130Q8N3G9 435 aa17.59■□□□□ 0.41
SSBP4-211ENST00000601614 C12orf50Q8NA57 414 aaPredicted RBP17.59■□□□□ 0.41
SSBP4-211ENST00000601614 ZFYVE19Q96K21 471 aa17.59■□□□□ 0.41
SSBP4-211ENST00000601614 ZNF512Q96ME7 567 aaPredicted RBP17.59■□□□□ 0.41
SSBP4-211ENST00000601614 MTMR9Q96QG7 549 aa17.59■□□□□ 0.41
SSBP4-211ENST00000601614 C8orf33Q9H7E9 229 aaPredicted RBP17.59■□□□□ 0.41
SSBP4-211ENST00000601614 ASAH2Q9NR71 780 aa17.59■□□□□ 0.41
SSBP4-211ENST00000601614 SH2B1Q9NRF2 756 aaPredicted RBP17.59■□□□□ 0.41
SSBP4-211ENST00000601614 GTSE1Q9NYZ3 720 aa17.59■□□□□ 0.41
SSBP4-211ENST00000601614 FASNP49327 2511 aaKnown RBP17.58■□□□□ 0.41
SSBP4-211ENST00000601614 ASPMQ8IZT6 3477 aa17.58■□□□□ 0.41
SSBP4-211ENST00000601614 MEFVO15553 781 aaPredicted RBP17.58■□□□□ 0.4
SSBP4-211ENST00000601614 ZZEF1O43149 2961 aa17.58■□□□□ 0.4
SSBP4-211ENST00000601614 EPN2O95208 641 aa17.58■□□□□ 0.4
SSBP4-211ENST00000601614 CTDNEP1O95476 244 aa17.58■□□□□ 0.4
SSBP4-211ENST00000601614 OSTNP61366 133 aa17.58■□□□□ 0.4
SSBP4-211ENST00000601614 PON2Q15165 354 aa17.58■□□□□ 0.4
SSBP4-211ENST00000601614 RNF19BQ6ZMZ0 732 aa17.58■□□□□ 0.4
SSBP4-211ENST00000601614 TMC8Q8IU68 726 aa17.58■□□□□ 0.4
SSBP4-211ENST00000601614 ELMOD1Q8N336 334 aa17.58■□□□□ 0.4
SSBP4-211ENST00000601614 DEPTORQ8TB45 409 aa17.58■□□□□ 0.4
SSBP4-211ENST00000601614 MSANTD3Q96H12 275 aa17.58■□□□□ 0.4
SSBP4-211ENST00000601614 MKNK1Q9BUB5 465 aa17.58■□□□□ 0.4
SSBP4-211ENST00000601614 LSM14BQ9BX40 385 aaKnown RBP17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms