RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 DPP3Q9NY33 737 aa18.94■□□□□ 0.62
SHKBP1-224ENST00000600718 CNTN3Q9P232 1028 aa18.94■□□□□ 0.62
SHKBP1-224ENST00000600718 NOCTQ9UK39 431 aaKnown RBP18.94■□□□□ 0.62
SHKBP1-224ENST00000600718 INTUQ9ULD6 942 aa18.94■□□□□ 0.62
SHKBP1-224ENST00000600718 HES2Q9Y543 173 aa18.94■□□□□ 0.62
SHKBP1-224ENST00000600718 SQORQ9Y6N5 450 aa18.94■□□□□ 0.62
SHKBP1-224ENST00000600718 ANK1P16157 1881 aa18.94■□□□□ 0.62
SHKBP1-224ENST00000600718 DNM1LO00429 736 aa18.93■□□□□ 0.62
SHKBP1-224ENST00000600718 RECQL4O94761 1208 aa18.93■□□□□ 0.62
SHKBP1-224ENST00000600718 ITGB3P05106 788 aa18.93■□□□□ 0.62
SHKBP1-224ENST00000600718 CYP11B1P15538 503 aa18.93■□□□□ 0.62
SHKBP1-224ENST00000600718 GTF2F1P35269 517 aaKnown RBP eCLIP18.93■□□□□ 0.621e-6■■■■■ 54.6
SHKBP1-224ENST00000600718 RBP5P82980 135 aa18.93■□□□□ 0.62
SHKBP1-224ENST00000600718 FBXO47Q5MNV8 452 aa18.93■□□□□ 0.62
SHKBP1-224ENST00000600718 SLC47A2Q86VL8 602 aa18.93■□□□□ 0.62
SHKBP1-224ENST00000600718 CXorf38Q8TB03 319 aa18.93■□□□□ 0.62
SHKBP1-224ENST00000600718 EPS8L1Q8TE68 723 aa18.93■□□□□ 0.62
SHKBP1-224ENST00000600718 IPPQ9Y573 584 aa18.93■□□□□ 0.62
SHKBP1-224ENST00000600718 PCDHB4Q9Y5E5 795 aa18.93■□□□□ 0.62
SHKBP1-224ENST00000600718 DUSP10Q9Y6W6 482 aa18.93■□□□□ 0.62
SHKBP1-224ENST00000600718 UMODL1Q5DID0 1318 aa18.93■□□□□ 0.62
SHKBP1-224ENST00000600718 PDE6CP51160 858 aa18.93■□□□□ 0.62
SHKBP1-224ENST00000600718 ZBTB6Q15916 424 aa18.93■□□□□ 0.62
SHKBP1-224ENST00000600718 NOP9Q86U38 636 aaKnown RBP18.93■□□□□ 0.62
SHKBP1-224ENST00000600718 RPUSD2Q8IZ73 545 aaKnown RBP18.93■□□□□ 0.62
SHKBP1-224ENST00000600718 USP38Q8NB14 1042 aa18.93■□□□□ 0.62
SHKBP1-224ENST00000600718 SLC20A1Q8WUM9 679 aa18.93■□□□□ 0.62
SHKBP1-224ENST00000600718 VRTNQ9H8Y1 702 aa18.93■□□□□ 0.62
SHKBP1-224ENST00000600718 ERVK-5Q9HDB9 667 aa18.93■□□□□ 0.62
SHKBP1-224ENST00000600718 PCDHB2Q9Y5E7 798 aa18.93■□□□□ 0.62
SHKBP1-224ENST00000600718 XKR4Q5GH76 650 aa18.92■□□□□ 0.62
SHKBP1-224ENST00000600718 ZNF667Q5HYK9 610 aa18.92■□□□□ 0.62
SHKBP1-224ENST00000600718 RNF10Q8N5U6 811 aaKnown RBP18.92■□□□□ 0.62
SHKBP1-224ENST00000600718 UBR7Q8N806 425 aa18.92■□□□□ 0.62
SHKBP1-224ENST00000600718 SMG8Q8ND04 991 aaKnown RBP18.92■□□□□ 0.62
SHKBP1-224ENST00000600718 BEST2Q8NFU1 509 aa18.92■□□□□ 0.62
SHKBP1-224ENST00000600718 SECISBP2LQ93073 1101 aaKnown RBP18.92■□□□□ 0.62
SHKBP1-224ENST00000600718 APOL6Q9BWW8 343 aa18.92■□□□□ 0.62
SHKBP1-224ENST00000600718 TRPV6Q9H1D0 765 aa18.92■□□□□ 0.62
SHKBP1-224ENST00000600718 PARP2Q9UGN5 583 aa18.92■□□□□ 0.62
SHKBP1-224ENST00000600718 BTNL10A8MVZ5 291 aa18.92■□□□□ 0.62
SHKBP1-224ENST00000600718 STAU1O95793 577 aaKnown RBP18.92■□□□□ 0.62
SHKBP1-224ENST00000600718 H2AFZP0C0S5 128 aa18.92■□□□□ 0.62
SHKBP1-224ENST00000600718 CCL5P13501 91 aa18.92■□□□□ 0.62
SHKBP1-224ENST00000600718 ZSCAN20P17040 1043 aaPredicted RBP18.92■□□□□ 0.62
SHKBP1-224ENST00000600718 CHRNB2P17787 502 aa18.92■□□□□ 0.62
SHKBP1-224ENST00000600718 AKAP5P24588 427 aa18.92■□□□□ 0.62
SHKBP1-224ENST00000600718 C1QTNF8P60827 252 aa18.92■□□□□ 0.62
SHKBP1-224ENST00000600718 YWHAEP62258 255 aaKnown RBP18.92■□□□□ 0.62
SHKBP1-224ENST00000600718 CDR2Q01850 454 aa18.92■□□□□ 0.62
SHKBP1-224ENST00000600718 H2AFVQ71UI9 128 aa18.92■□□□□ 0.62
SHKBP1-224ENST00000600718 ZNF677Q86XU0 584 aa18.92■□□□□ 0.62
SHKBP1-224ENST00000600718 HACE1Q8IYU2 909 aa18.92■□□□□ 0.62
SHKBP1-224ENST00000600718 SLC35F6Q8N357 371 aa18.92■□□□□ 0.62
SHKBP1-224ENST00000600718 ZMAT2Q96NC0 199 aaKnown RBP18.92■□□□□ 0.62
SHKBP1-224ENST00000600718 DEFB118Q96PH6 123 aa18.92■□□□□ 0.62
SHKBP1-224ENST00000600718 AGO3Q9H9G7 860 aaKnown RBP18.92■□□□□ 0.62
SHKBP1-224ENST00000600718 SEPT11Q9NVA2 429 aaKnown RBP18.92■□□□□ 0.62
SHKBP1-224ENST00000600718 OGDHLQ9ULD0 1010 aa18.92■□□□□ 0.62
SHKBP1-224ENST00000600718 PADI3Q9ULW8 664 aa18.92■□□□□ 0.62
SHKBP1-224ENST00000600718 AGAP1Q9UPQ3 857 aa18.92■□□□□ 0.62
SHKBP1-224ENST00000600718 FRMPD3Q5JV73 1810 aa18.91■□□□□ 0.62
SHKBP1-224ENST00000600718 KCNE1P15382 129 aa18.91■□□□□ 0.62
SHKBP1-224ENST00000600718 POLR2BP30876 1174 aaKnown RBP18.91■□□□□ 0.62
SHKBP1-224ENST00000600718 PAK2Q13177 524 aa18.91■□□□□ 0.62
SHKBP1-224ENST00000600718 MTFR1Q15390 333 aa18.91■□□□□ 0.62
SHKBP1-224ENST00000600718 ZNF618Q5T7W0 954 aa18.91■□□□□ 0.62
SHKBP1-224ENST00000600718 RNF208Q9H0X6 261 aa18.91■□□□□ 0.62
SHKBP1-224ENST00000600718 RNF39Q9H2S5 420 aa18.91■□□□□ 0.62
SHKBP1-224ENST00000600718 MACROD2A1Z1Q3 448 aa18.9■□□□□ 0.62
SHKBP1-224ENST00000600718 XPOTO43592 962 aaKnown RBP18.9■□□□□ 0.62
SHKBP1-224ENST00000600718 CKBP12277 381 aa18.9■□□□□ 0.62
SHKBP1-224ENST00000600718 P4HA1P13674 534 aa18.9■□□□□ 0.62
SHKBP1-224ENST00000600718 CDK7P50613 346 aa18.9■□□□□ 0.62
SHKBP1-224ENST00000600718 LPIN1Q14693 890 aa18.9■□□□□ 0.62
SHKBP1-224ENST00000600718 TMEM270Q6UE05 265 aa18.9■□□□□ 0.62
SHKBP1-224ENST00000600718 DDX1Q92499 740 aaKnown RBP18.9■□□□□ 0.62
SHKBP1-224ENST00000600718 HPDLQ96IR7 371 aa18.9■□□□□ 0.62
SHKBP1-224ENST00000600718 PACSIN1Q9BY11 444 aa18.9■□□□□ 0.62
SHKBP1-224ENST00000600718 FAM105AQ9NUU6 356 aa18.9■□□□□ 0.62
SHKBP1-224ENST00000600718 NXF1Q9UBU9 619 aaKnown RBP18.9■□□□□ 0.62
SHKBP1-224ENST00000600718 UBQLN1Q9UMX0 589 aaKnown RBP18.9■□□□□ 0.62
SHKBP1-224ENST00000600718 SMIM28A0A1B0GU29 152 aa18.9■□□□□ 0.62
SHKBP1-224ENST00000600718 FANCGO15287 622 aa18.9■□□□□ 0.62
SHKBP1-224ENST00000600718 TACC1O75410 805 aa18.9■□□□□ 0.62
SHKBP1-224ENST00000600718 GHRP10912 638 aa18.9■□□□□ 0.62
SHKBP1-224ENST00000600718 GZMAP12544 262 aa18.9■□□□□ 0.62
SHKBP1-224ENST00000600718 CD52P31358 61 aa18.9■□□□□ 0.62
SHKBP1-224ENST00000600718 ASPAP45381 313 aa18.9■□□□□ 0.62
SHKBP1-224ENST00000600718 GUCY2FP51841 1108 aa18.9■□□□□ 0.62
SHKBP1-224ENST00000600718 FMO1Q01740 532 aa18.9■□□□□ 0.62
SHKBP1-224ENST00000600718 WDR72Q3MJ13 1102 aa18.9■□□□□ 0.62
SHKBP1-224ENST00000600718 TAF3Q5VWG9 929 aa18.9■□□□□ 0.62
SHKBP1-224ENST00000600718 RBBP8NLQ8NC74 664 aaPredicted RBP18.9■□□□□ 0.62
SHKBP1-224ENST00000600718 TRAIPQ9BWF2 469 aa18.9■□□□□ 0.62
SHKBP1-224ENST00000600718 BCO2Q9BYV7 579 aa18.9■□□□□ 0.62
SHKBP1-224ENST00000600718 CXCL16Q9H2A7 254 aa18.9■□□□□ 0.62
SHKBP1-224ENST00000600718 ACP6Q9NPH0 428 aa18.9■□□□□ 0.62
SHKBP1-224ENST00000600718 CISHQ9NSE2 258 aa18.9■□□□□ 0.62
SHKBP1-224ENST00000600718 CTAGE9A4FU28 777 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms