RNA–Protein interactions for RNA: ENST00000600196.1

TGFB1-204, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 399 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-204ENST00000600196 NRP1O14786 923 aa13.23□□□□□ -0.29
TGFB1-204ENST00000600196 SYN3O14994 580 aa13.23□□□□□ -0.29
TGFB1-204ENST00000600196 EFEMP2O95967 443 aa13.23□□□□□ -0.29
TGFB1-204ENST00000600196 ASS1P00966 412 aaKnown RBP13.23□□□□□ -0.29
TGFB1-204ENST00000600196 SERPINC1P01008 464 aa13.23□□□□□ -0.29
TGFB1-204ENST00000600196 TYMPP19971 482 aa13.23□□□□□ -0.29
TGFB1-204ENST00000600196 GCLMP48507 274 aa13.23□□□□□ -0.29
TGFB1-204ENST00000600196 TAF6P49848 677 aa13.23□□□□□ -0.29
TGFB1-204ENST00000600196 AFF1P51825 1210 aaKnown RBP13.23□□□□□ -0.29
TGFB1-204ENST00000600196 WNT7BP56706 349 aa13.23□□□□□ -0.29
TGFB1-204ENST00000600196 BCAR1P56945 870 aa13.23□□□□□ -0.29
TGFB1-204ENST00000600196 BIRC3Q13489 604 aa13.23□□□□□ -0.29
TGFB1-204ENST00000600196 BMS1Q14692 1282 aaKnown RBP13.23□□□□□ -0.29
TGFB1-204ENST00000600196 EXOC3L4Q17RC7 722 aa13.23□□□□□ -0.29
TGFB1-204ENST00000600196 EPC2Q52LR7 807 aa13.23□□□□□ -0.29
TGFB1-204ENST00000600196 TDRD10Q5VZ19 366 aaKnown RBP13.23□□□□□ -0.29
TGFB1-204ENST00000600196 PDE12Q6L8Q7 609 aaKnown RBP13.23□□□□□ -0.29
TGFB1-204ENST00000600196 GPR153Q6NV75 609 aa13.23□□□□□ -0.29
TGFB1-204ENST00000600196 CHRDL2Q6WN34 429 aa13.23□□□□□ -0.29
TGFB1-204ENST00000600196 ENOSF1Q7L5Y1 443 aa13.23□□□□□ -0.29
TGFB1-204ENST00000600196 ZNF280BQ86YH2 543 aa13.23□□□□□ -0.29
TGFB1-204ENST00000600196 FMNL3Q8IVF7 1028 aa13.23□□□□□ -0.29
TGFB1-204ENST00000600196 TMEM86AQ8N2M4 240 aa13.23□□□□□ -0.29
TGFB1-204ENST00000600196 TGS1Q96RS0 853 aaKnown RBP13.23□□□□□ -0.29
TGFB1-204ENST00000600196 POP1Q99575 1024 aaKnown RBP13.23□□□□□ -0.29
TGFB1-204ENST00000600196 EDEM3Q9BZQ6 932 aa13.23□□□□□ -0.29
TGFB1-204ENST00000600196 MTMR12Q9C0I1 747 aa13.23□□□□□ -0.29
TGFB1-204ENST00000600196 CYP3A43Q9HB55 503 aa13.23□□□□□ -0.29
TGFB1-204ENST00000600196 PLCB1Q9NQ66 1216 aa13.23□□□□□ -0.29
TGFB1-204ENST00000600196 PUF60Q9UHX1 559 aaKnown RBP13.23□□□□□ -0.29
TGFB1-204ENST00000600196 SIX4Q9UIU6 781 aa13.23□□□□□ -0.29
TGFB1-204ENST00000600196 PLAGL2Q9UPG8 496 aa13.23□□□□□ -0.29
TGFB1-204ENST00000600196 KPNA7A9QM74 516 aa13.22□□□□□ -0.29
TGFB1-204ENST00000600196 M0QZQ0 153 aa13.22□□□□□ -0.29
TGFB1-204ENST00000600196 B3GAT3O94766 335 aa13.22□□□□□ -0.29
TGFB1-204ENST00000600196 ITGB3P05106 788 aa13.22□□□□□ -0.29
TGFB1-204ENST00000600196 LINC00271P0C7V0 271 aa13.22□□□□□ -0.29
TGFB1-204ENST00000600196 TBXAS1P24557 533 aaPredicted RBP13.22□□□□□ -0.29
TGFB1-204ENST00000600196 CLCNKBP51801 687 aa13.22□□□□□ -0.29
TGFB1-204ENST00000600196 LILRA4P59901 499 aa13.22□□□□□ -0.29
TGFB1-204ENST00000600196 FANCCQ00597 558 aa13.22□□□□□ -0.29
TGFB1-204ENST00000600196 MYL7Q01449 175 aa13.22□□□□□ -0.29
TGFB1-204ENST00000600196 SOX4Q06945 474 aaPredicted RBP13.22□□□□□ -0.29
TGFB1-204ENST00000600196 NR1I3Q14994 352 aa13.22□□□□□ -0.29
TGFB1-204ENST00000600196 GLRA4Q5JXX5 417 aa13.22□□□□□ -0.29
TGFB1-204ENST00000600196 LIMS2Q7Z4I7 341 aa13.22□□□□□ -0.29
TGFB1-204ENST00000600196 DDX53Q86TM3 631 aaKnown RBP13.22□□□□□ -0.29
TGFB1-204ENST00000600196 GAS2L3Q86XJ1 694 aa13.22□□□□□ -0.29
TGFB1-204ENST00000600196 CREBRFQ8IUR6 639 aa13.22□□□□□ -0.29
TGFB1-204ENST00000600196 SLC39A11Q8N1S5 342 aa13.22□□□□□ -0.29
TGFB1-204ENST00000600196 TOP6BLQ8N6T0 577 aa13.22□□□□□ -0.29
TGFB1-204ENST00000600196 COLGALT1Q8NBJ5 622 aa13.22□□□□□ -0.29
TGFB1-204ENST00000600196 APPL2Q8NEU8 664 aa13.22□□□□□ -0.29
TGFB1-204ENST00000600196 C18orf25Q96B23 403 aaPredicted RBP13.22□□□□□ -0.29
TGFB1-204ENST00000600196 IGSF21Q96ID5 467 aa13.22□□□□□ -0.29
TGFB1-204ENST00000600196 HPDLQ96IR7 371 aa13.22□□□□□ -0.29
TGFB1-204ENST00000600196 SUSD3Q96L08 255 aa13.22□□□□□ -0.29
TGFB1-204ENST00000600196 C11orf84Q9BUA3 381 aaPredicted RBP13.22□□□□□ -0.29
TGFB1-204ENST00000600196 LMAN2LQ9H0V9 348 aa13.22□□□□□ -0.29
TGFB1-204ENST00000600196 RBSNQ9H1K0 784 aa13.22□□□□□ -0.29
TGFB1-204ENST00000600196 ADAM28Q9UKQ2 775 aa13.22□□□□□ -0.29
TGFB1-204ENST00000600196 AGAP1Q9UPQ3 857 aa13.22□□□□□ -0.29
TGFB1-204ENST00000600196 MRPL42Q9Y6G3 142 aaKnown RBP13.22□□□□□ -0.29
TGFB1-204ENST00000600196 ANK1P16157 1881 aa13.21□□□□□ -0.29
TGFB1-204ENST00000600196 PDCD11Q14690 1871 aaKnown RBP13.21□□□□□ -0.29
TGFB1-204ENST00000600196 SF3B1O75533 1304 aaKnown RBP eCLIP13.21□□□□□ -0.294e-7■■■■■ 98.9
TGFB1-204ENST00000600196 PTPRJQ12913 1337 aa13.21□□□□□ -0.29
TGFB1-204ENST00000600196 LINC01553A4QN01 128 aa13.21□□□□□ -0.29
TGFB1-204ENST00000600196 TACC1O75410 805 aa13.21□□□□□ -0.29
TGFB1-204ENST00000600196 TADA2AO75478 443 aa13.21□□□□□ -0.29
TGFB1-204ENST00000600196 CST3P01034 146 aaPredicted RBP13.21□□□□□ -0.29
TGFB1-204ENST00000600196 HLA-DRAP01903 254 aa13.21□□□□□ -0.29
TGFB1-204ENST00000600196 CYP11A1P05108 521 aa13.21□□□□□ -0.29
TGFB1-204ENST00000600196 TRIM49P0CI25 452 aa13.21□□□□□ -0.29
TGFB1-204ENST00000600196 TRIM49CP0CI26 452 aa13.21□□□□□ -0.29
TGFB1-204ENST00000600196 ATP1A3P13637 1013 aa13.21□□□□□ -0.29
TGFB1-204ENST00000600196 OR1G1P47890 313 aa13.21□□□□□ -0.29
TGFB1-204ENST00000600196 SLC11A1P49279 550 aa13.21□□□□□ -0.29
TGFB1-204ENST00000600196 UBASH3AP57075 661 aa13.21□□□□□ -0.29
TGFB1-204ENST00000600196 YWHAEP62258 255 aaKnown RBP13.21□□□□□ -0.29
TGFB1-204ENST00000600196 GCNT1Q02742 428 aa13.21□□□□□ -0.29
TGFB1-204ENST00000600196 CREMQ03060 361 aa13.21□□□□□ -0.29
TGFB1-204ENST00000600196 CBWD6Q4V339 395 aa13.21□□□□□ -0.29
TGFB1-204ENST00000600196 FIGNQ5HY92 759 aa13.21□□□□□ -0.29
TGFB1-204ENST00000600196 ZNF667Q5HYK9 610 aa13.21□□□□□ -0.29
TGFB1-204ENST00000600196 CBWD3Q5JTY5 395 aa13.21□□□□□ -0.29
TGFB1-204ENST00000600196 CBWD5Q5RIA9 395 aa13.21□□□□□ -0.29
TGFB1-204ENST00000600196 SPOUT1Q5T280 376 aaKnown RBP13.21□□□□□ -0.29
TGFB1-204ENST00000600196 FAM109BQ6ICB4 259 aaPredicted RBP13.21□□□□□ -0.29
TGFB1-204ENST00000600196 RNF168Q8IYW5 571 aaPredicted RBP13.21□□□□□ -0.29
TGFB1-204ENST00000600196 LMO3Q8TAP4 145 aa13.21□□□□□ -0.29
TGFB1-204ENST00000600196 TMEM169Q96HH4 297 aa13.21□□□□□ -0.29
TGFB1-204ENST00000600196 NUP58Q9BVL2 599 aa13.21□□□□□ -0.29
TGFB1-204ENST00000600196 PBX4Q9BYU1 374 aa13.21□□□□□ -0.29
TGFB1-204ENST00000600196 XYLT2Q9H1B5 865 aa13.21□□□□□ -0.29
TGFB1-204ENST00000600196 SLC28A3Q9HAS3 691 aa13.21□□□□□ -0.29
TGFB1-204ENST00000600196 TUBGCP4Q9UGJ1 667 aa13.21□□□□□ -0.29
TGFB1-204ENST00000600196 NUB1Q9Y5A7 615 aa13.21□□□□□ -0.29
TGFB1-204ENST00000600196 TRIP11Q15643 1979 aa13.2□□□□□ -0.3
TGFB1-204ENST00000600196 TDRD15B5MCY1 1934 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms