RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 EPC2Q52LR7 807 aa13.64□□□□□ -0.23
CHMP2A-206ENST00000600118 DCLRE1AQ6PJP8 1040 aa13.64□□□□□ -0.23
CHMP2A-206ENST00000600118 KCNT2Q6UVM3 1135 aa13.64□□□□□ -0.23
CHMP2A-206ENST00000600118 SLC39A11Q8N1S5 342 aa13.64□□□□□ -0.23
CHMP2A-206ENST00000600118 LRRC52Q8N7C0 313 aa13.64□□□□□ -0.23
CHMP2A-206ENST00000600118 C3orf58Q8NDZ4 430 aa13.64□□□□□ -0.23
CHMP2A-206ENST00000600118 SEMA4DQ92854 862 aa13.64□□□□□ -0.23
CHMP2A-206ENST00000600118 XYLT2Q9H1B5 865 aa13.64□□□□□ -0.23
CHMP2A-206ENST00000600118 VPS16Q9H269 839 aa13.64□□□□□ -0.23
CHMP2A-206ENST00000600118 MMRN2Q9H8L6 949 aa13.64□□□□□ -0.23
CHMP2A-206ENST00000600118 VRTNQ9H8Y1 702 aa13.64□□□□□ -0.23
CHMP2A-206ENST00000600118 AGAP1Q9UPQ3 857 aa13.64□□□□□ -0.23
CHMP2A-206ENST00000600118 CITO14578 2027 aa13.64□□□□□ -0.23
CHMP2A-206ENST00000600118 A0A1B0GTH6 734 aa13.63□□□□□ -0.23
CHMP2A-206ENST00000600118 GTPBP10A4D1E9 387 aaKnown RBP13.63□□□□□ -0.23
CHMP2A-206ENST00000600118 F8W810 466 aa13.63□□□□□ -0.23
CHMP2A-206ENST00000600118 SPTLC1O15269 473 aa13.63□□□□□ -0.23
CHMP2A-206ENST00000600118 PHACTR2O75167 634 aa13.63□□□□□ -0.23
CHMP2A-206ENST00000600118 KIF4AO95239 1232 aa13.63□□□□□ -0.23
CHMP2A-206ENST00000600118 EFEMP2O95967 443 aa13.63□□□□□ -0.23
CHMP2A-206ENST00000600118 HLA-DRAP01903 254 aa13.63□□□□□ -0.23
CHMP2A-206ENST00000600118 ITGB1P05556 798 aa13.63□□□□□ -0.23
CHMP2A-206ENST00000600118 PAX3P23760 479 aa13.63□□□□□ -0.23
CHMP2A-206ENST00000600118 BMPR1AP36894 532 aa13.63□□□□□ -0.23
CHMP2A-206ENST00000600118 PBX3P40426 434 aa13.63□□□□□ -0.23
CHMP2A-206ENST00000600118 MYL6P60660 151 aa13.63□□□□□ -0.23
CHMP2A-206ENST00000600118 FANCCQ00597 558 aa13.63□□□□□ -0.23
CHMP2A-206ENST00000600118 MYL7Q01449 175 aa13.63□□□□□ -0.23
CHMP2A-206ENST00000600118 TAP1Q03518 808 aa13.63□□□□□ -0.23
CHMP2A-206ENST00000600118 TMEM173Q86WV6 379 aaPredicted RBP13.63□□□□□ -0.23
CHMP2A-206ENST00000600118 COLGALT1Q8NBJ5 622 aa13.63□□□□□ -0.23
CHMP2A-206ENST00000600118 FBXL13Q8NEE6 735 aa13.63□□□□□ -0.23
CHMP2A-206ENST00000600118 LMO3Q8TAP4 145 aa13.63□□□□□ -0.23
CHMP2A-206ENST00000600118 BCL7CQ8WUZ0 217 aaPredicted RBP13.63□□□□□ -0.23
CHMP2A-206ENST00000600118 RABGGTAQ92696 567 aa13.63□□□□□ -0.23
CHMP2A-206ENST00000600118 ZNF558Q96NG5 402 aa13.63□□□□□ -0.23
CHMP2A-206ENST00000600118 NAP1L5Q96NT1 182 aaPredicted RBP13.63□□□□□ -0.23
CHMP2A-206ENST00000600118 COLEC11Q9BWP8 271 aa13.63□□□□□ -0.23
CHMP2A-206ENST00000600118 AAASQ9NRG9 546 aa13.63□□□□□ -0.23
CHMP2A-206ENST00000600118 MSRAQ9UJ68 235 aa13.63□□□□□ -0.23
CHMP2A-206ENST00000600118 FAN1Q9Y2M0 1017 aa13.63□□□□□ -0.23
CHMP2A-206ENST00000600118 PRG3Q9Y2Y8 225 aaPredicted RBP13.63□□□□□ -0.23
CHMP2A-206ENST00000600118 PDCD11Q14690 1871 aaKnown RBP13.62□□□□□ -0.23
CHMP2A-206ENST00000600118 LRRN2O75325 713 aa13.62□□□□□ -0.23
CHMP2A-206ENST00000600118 B3GAT3O94766 335 aa13.62□□□□□ -0.23
CHMP2A-206ENST00000600118 ASS1P00966 412 aaKnown RBP13.62□□□□□ -0.23
CHMP2A-206ENST00000600118 KRT19P08727 400 aa13.62□□□□□ -0.23
CHMP2A-206ENST00000600118 ATICP31939 592 aa13.62□□□□□ -0.23
CHMP2A-206ENST00000600118 PNPLA4P41247 253 aa13.62□□□□□ -0.23
CHMP2A-206ENST00000600118 PIK3CAP42336 1068 aa13.62□□□□□ -0.23
CHMP2A-206ENST00000600118 ALDH7A1P49419 539 aaKnown RBP13.62□□□□□ -0.23
CHMP2A-206ENST00000600118 LILRA4P59901 499 aa13.62□□□□□ -0.23
CHMP2A-206ENST00000600118 ERVK-21P61565 698 aa13.62□□□□□ -0.23
CHMP2A-206ENST00000600118 TRPC3Q13507 836 aa13.62□□□□□ -0.23
CHMP2A-206ENST00000600118 SGSM1Q2NKQ1 1148 aa13.62□□□□□ -0.23
CHMP2A-206ENST00000600118 SPRED2Q7Z698 418 aa13.62□□□□□ -0.23
CHMP2A-206ENST00000600118 TAF4BQ92750 862 aa13.62□□□□□ -0.23
CHMP2A-206ENST00000600118 IGSF21Q96ID5 467 aa13.62□□□□□ -0.23
CHMP2A-206ENST00000600118 SAMD11Q96NU1 681 aa13.62□□□□□ -0.23
CHMP2A-206ENST00000600118 PLVAPQ9BX97 442 aa13.62□□□□□ -0.23
CHMP2A-206ENST00000600118 NKX2-4Q9H2Z4 354 aa13.62□□□□□ -0.23
CHMP2A-206ENST00000600118 RTN4Q9NQC3 1192 aaKnown RBP13.62□□□□□ -0.23
CHMP2A-206ENST00000600118 RAB20Q9NX57 234 aa13.62□□□□□ -0.23
CHMP2A-206ENST00000600118 RWDD3Q9Y3V2 267 aa13.62□□□□□ -0.23
CHMP2A-206ENST00000600118 NT5C1B-RDH14C9J2C7 533 aa13.61□□□□□ -0.23
CHMP2A-206ENST00000600118 C5orf67F2Z3F1 127 aa13.61□□□□□ -0.23
CHMP2A-206ENST00000600118 TPM2P07951 284 aa13.61□□□□□ -0.23
CHMP2A-206ENST00000600118 DNAJB2P25686 324 aa13.61□□□□□ -0.23
CHMP2A-206ENST00000600118 PPM1AP35813 382 aa13.61□□□□□ -0.23
CHMP2A-206ENST00000600118 TAF6P49848 677 aa13.61□□□□□ -0.23
CHMP2A-206ENST00000600118 KCNMA1Q12791 1236 aa13.61□□□□□ -0.23
CHMP2A-206ENST00000600118 CETN1Q12798 172 aa13.61□□□□□ -0.23
CHMP2A-206ENST00000600118 NR1I3Q14994 352 aa13.61□□□□□ -0.23
CHMP2A-206ENST00000600118 UVSSAQ2YD98 709 aa13.61□□□□□ -0.23
CHMP2A-206ENST00000600118 SPOUT1Q5T280 376 aaKnown RBP13.61□□□□□ -0.23
CHMP2A-206ENST00000600118 DPY19L2P1Q6NXN4 242 aa13.61□□□□□ -0.23
CHMP2A-206ENST00000600118 SARM1Q6SZW1 724 aa13.61□□□□□ -0.23
CHMP2A-206ENST00000600118 LIMS2Q7Z4I7 341 aa13.61□□□□□ -0.23
CHMP2A-206ENST00000600118 RNF168Q8IYW5 571 aaPredicted RBP13.61□□□□□ -0.23
CHMP2A-206ENST00000600118 EHBP1Q8NDI1 1231 aa13.61□□□□□ -0.23
CHMP2A-206ENST00000600118 HPDLQ96IR7 371 aa13.61□□□□□ -0.23
CHMP2A-206ENST00000600118 ZNF560Q96MR9 790 aa13.61□□□□□ -0.23
CHMP2A-206ENST00000600118 TGS1Q96RS0 853 aaKnown RBP13.61□□□□□ -0.23
CHMP2A-206ENST00000600118 C17orf80Q9BSJ5 609 aa13.61□□□□□ -0.23
CHMP2A-206ENST00000600118 VN1R3Q9BXE9 311 aa13.61□□□□□ -0.23
CHMP2A-206ENST00000600118 APOBEC3GQ9HC16 384 aaKnown RBP13.61□□□□□ -0.23
CHMP2A-206ENST00000600118 GDAP2Q9NXN4 497 aa13.61□□□□□ -0.23
CHMP2A-206ENST00000600118 SPG21Q9NZD8 308 aa13.61□□□□□ -0.23
CHMP2A-206ENST00000600118 ADAM28Q9UKQ2 775 aa13.61□□□□□ -0.23
CHMP2A-206ENST00000600118 PCDHB12Q9Y5F1 795 aa13.61□□□□□ -0.23
CHMP2A-206ENST00000600118 TRIP11Q15643 1979 aa13.6□□□□□ -0.23
CHMP2A-206ENST00000600118 KPNA7A9QM74 516 aa13.6□□□□□ -0.23
CHMP2A-206ENST00000600118 M0QZQ0 153 aa13.6□□□□□ -0.23
CHMP2A-206ENST00000600118 TEX33O43247 280 aa13.6□□□□□ -0.23
CHMP2A-206ENST00000600118 AP5Z1O43299 807 aa13.6□□□□□ -0.23
CHMP2A-206ENST00000600118 SERPINC1P01008 464 aa13.6□□□□□ -0.23
CHMP2A-206ENST00000600118 RB1P06400 928 aa13.6□□□□□ -0.23
CHMP2A-206ENST00000600118 PON1P27169 355 aa13.6□□□□□ -0.23
CHMP2A-206ENST00000600118 BRCC3P46736 316 aa13.6□□□□□ -0.23
CHMP2A-206ENST00000600118 PLCB3Q01970 1234 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms