RNA–Protein interactions for RNA: ENST00000599564.5

GRAMD1A-211, Transcript of GRAM domain containing 1A, humanhuman

TSL 5 BASIC

Gene GRAMD1A, Length 2,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-211ENST00000599564 PARVGQ9HBI0 331 aa17.8■□□□□ 0.44
GRAMD1A-211ENST00000599564 NOCTQ9UK39 431 aaKnown RBP17.8■□□□□ 0.44
GRAMD1A-211ENST00000599564 ROBO1Q9Y6N7 1651 aa17.8■□□□□ 0.44
GRAMD1A-211ENST00000599564 SPATA31D3P0C874 917 aa17.79■□□□□ 0.44
GRAMD1A-211ENST00000599564 BMP3P12645 472 aa17.79■□□□□ 0.44
GRAMD1A-211ENST00000599564 SERPINB3P29508 390 aa17.79■□□□□ 0.44
GRAMD1A-211ENST00000599564 ODR4Q5SWX8 454 aa17.79■□□□□ 0.44
GRAMD1A-211ENST00000599564 SPATA31D4Q6ZUB0 917 aa17.79■□□□□ 0.44
GRAMD1A-211ENST00000599564 ATL2Q8NHH9 583 aa17.79■□□□□ 0.44
GRAMD1A-211ENST00000599564 SH3TC2Q8TF17 1288 aa17.79■□□□□ 0.44
GRAMD1A-211ENST00000599564 BICD1Q96G01 975 aa17.79■□□□□ 0.44
GRAMD1A-211ENST00000599564 ZNF184Q99676 751 aaPredicted RBP17.79■□□□□ 0.44
GRAMD1A-211ENST00000599564 CYLDQ9NQC7 956 aa17.79■□□□□ 0.44
GRAMD1A-211ENST00000599564 MSH4O15457 936 aa17.79■□□□□ 0.44
GRAMD1A-211ENST00000599564 LYNP07948 512 aa17.79■□□□□ 0.44
GRAMD1A-211ENST00000599564 KRT4P19013 534 aa17.79■□□□□ 0.44
GRAMD1A-211ENST00000599564 HOXA13P31271 388 aaPredicted RBP17.79■□□□□ 0.44
GRAMD1A-211ENST00000599564 ZBTB16Q05516 673 aa17.79■□□□□ 0.44
GRAMD1A-211ENST00000599564 AP1B1Q10567 949 aa17.79■□□□□ 0.44
GRAMD1A-211ENST00000599564 NFIXQ14938 502 aa17.79■□□□□ 0.44
GRAMD1A-211ENST00000599564 ARMCX1Q9P291 453 aa17.79■□□□□ 0.44
GRAMD1A-211ENST00000599564 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.79■□□□□ 0.44
GRAMD1A-211ENST00000599564 LAMB2P55268 1798 aa17.79■□□□□ 0.44
GRAMD1A-211ENST00000599564 MEIS2O14770 477 aa17.78■□□□□ 0.44
GRAMD1A-211ENST00000599564 ETS1P14921 441 aa17.78■□□□□ 0.44
GRAMD1A-211ENST00000599564 MAPK4P31152 587 aa17.78■□□□□ 0.44
GRAMD1A-211ENST00000599564 NOVP48745 357 aa17.78■□□□□ 0.44
GRAMD1A-211ENST00000599564 RHBDL3P58872 404 aa17.78■□□□□ 0.44
GRAMD1A-211ENST00000599564 ZNF720Q7Z2F6 126 aa17.78■□□□□ 0.44
GRAMD1A-211ENST00000599564 MORC4Q8TE76 937 aa17.78■□□□□ 0.44
GRAMD1A-211ENST00000599564 GRK7Q8WTQ7 553 aa17.78■□□□□ 0.44
GRAMD1A-211ENST00000599564 PTPRN2Q92932 1015 aa17.78■□□□□ 0.44
GRAMD1A-211ENST00000599564 CYTH2Q99418 400 aa17.78■□□□□ 0.44
GRAMD1A-211ENST00000599564 MKNK1Q9BUB5 465 aa17.78■□□□□ 0.44
GRAMD1A-211ENST00000599564 SYNCQ9H7C4 482 aa17.78■□□□□ 0.44
GRAMD1A-211ENST00000599564 TAS2R1Q9NYW7 299 aa17.78■□□□□ 0.44
GRAMD1A-211ENST00000599564 PRPF4O43172 522 aaKnown RBP eCLIP17.78■□□□□ 0.444e-7■■■□□ 14.8
GRAMD1A-211ENST00000599564 CYP1A2P05177 515 aa17.78■□□□□ 0.44
GRAMD1A-211ENST00000599564 EFTUD2Q15029 972 aaKnown RBP eCLIP17.78■□□□□ 0.443e-7■■■■■ 63
GRAMD1A-211ENST00000599564 LRRC6Q86X45 466 aa17.78■□□□□ 0.44
GRAMD1A-211ENST00000599564 FIZ1Q96SL8 496 aa17.78■□□□□ 0.44
GRAMD1A-211ENST00000599564 PLVAPQ9BX97 442 aa17.78■□□□□ 0.44
GRAMD1A-211ENST00000599564 KLHL11Q9NVR0 708 aa17.78■□□□□ 0.44
GRAMD1A-211ENST00000599564 EIF3DO15371 548 aaKnown RBP eCLIP17.77■□□□□ 0.44
GRAMD1A-211ENST00000599564 MTA2O94776 668 aa17.77■□□□□ 0.44
GRAMD1A-211ENST00000599564 SCNN1BP51168 640 aa17.77■□□□□ 0.44
GRAMD1A-211ENST00000599564 RTP1P59025 263 aa17.77■□□□□ 0.44
GRAMD1A-211ENST00000599564 NOP14P78316 857 aaKnown RBP17.77■□□□□ 0.44
GRAMD1A-211ENST00000599564 CAV1Q03135 178 aa17.77■□□□□ 0.44
GRAMD1A-211ENST00000599564 NR1H3Q13133 447 aa17.77■□□□□ 0.44
GRAMD1A-211ENST00000599564 RASA3Q14644 834 aa17.77■□□□□ 0.44
GRAMD1A-211ENST00000599564 MDH1BQ5I0G3 518 aa17.77■□□□□ 0.44
GRAMD1A-211ENST00000599564 IZUMO2Q6UXV1 221 aa17.77■□□□□ 0.44
GRAMD1A-211ENST00000599564 PTCD3Q96EY7 689 aaKnown RBP17.77■□□□□ 0.44
GRAMD1A-211ENST00000599564 NAP1L4Q99733 375 aaKnown RBP17.77■□□□□ 0.44
GRAMD1A-211ENST00000599564 SAR1AQ9NR31 198 aa17.77■□□□□ 0.44
GRAMD1A-211ENST00000599564 DMAC2Q9NW81 257 aa17.77■□□□□ 0.44
GRAMD1A-211ENST00000599564 IRS2Q9Y4H2 1338 aa17.77■□□□□ 0.44
GRAMD1A-211ENST00000599564 CYP3A7-CYP3A51PA0A087WV96 503 aa17.77■□□□□ 0.44
GRAMD1A-211ENST00000599564 GOLGA8SH3BPF8 625 aa17.77■□□□□ 0.44
GRAMD1A-211ENST00000599564 GOLGA8MH3BSY2 632 aa17.77■□□□□ 0.44
GRAMD1A-211ENST00000599564 GAP43P17677 238 aa17.77■□□□□ 0.44
GRAMD1A-211ENST00000599564 CYP3A7P24462 503 aa17.77■□□□□ 0.44
GRAMD1A-211ENST00000599564 DYNC1I2Q13409 638 aaKnown RBP17.77■□□□□ 0.44
GRAMD1A-211ENST00000599564 SHROOM1Q2M3G4 852 aaPredicted RBP17.77■□□□□ 0.44
GRAMD1A-211ENST00000599564 DHX38Q92620 1227 aaKnown RBP17.77■□□□□ 0.44
GRAMD1A-211ENST00000599564 CFAP57Q96MR6 1250 aa17.77■□□□□ 0.44
GRAMD1A-211ENST00000599564 KREMEN1Q96MU8 473 aa17.77■□□□□ 0.44
GRAMD1A-211ENST00000599564 FAM161BQ96MY7 647 aa17.77■□□□□ 0.44
GRAMD1A-211ENST00000599564 FHDC1Q9C0D6 1143 aaPredicted RBP17.77■□□□□ 0.44
GRAMD1A-211ENST00000599564 USP1O94782 785 aa17.76■□□□□ 0.43
GRAMD1A-211ENST00000599564 TROVE2P10155 538 aaKnown RBP eCLIP17.76■□□□□ 0.43
GRAMD1A-211ENST00000599564 TCEAL1Q15170 157 aa17.76■□□□□ 0.43
GRAMD1A-211ENST00000599564 SEPT7Q16181 437 aaKnown RBP17.76■□□□□ 0.43
GRAMD1A-211ENST00000599564 RGS9BPQ6ZS82 235 aa17.76■□□□□ 0.43
GRAMD1A-211ENST00000599564 C1orf186Q6ZWK4 172 aa17.76■□□□□ 0.43
GRAMD1A-211ENST00000599564 NBPF5PQ86XG9 351 aaPredicted RBP17.76■□□□□ 0.43
GRAMD1A-211ENST00000599564 ANKMY2Q8IV38 441 aa17.76■□□□□ 0.43
GRAMD1A-211ENST00000599564 FBXO27Q8NI29 283 aa17.76■□□□□ 0.43
GRAMD1A-211ENST00000599564 NSL1Q96IY1 281 aa17.76■□□□□ 0.43
GRAMD1A-211ENST00000599564 TMX4Q9H1E5 349 aaPredicted RBP17.76■□□□□ 0.43
GRAMD1A-211ENST00000599564 DMAP1Q9NPF5 467 aaPredicted RBP17.76■□□□□ 0.43
GRAMD1A-211ENST00000599564 ANKFY1Q9P2R3 1169 aa17.76■□□□□ 0.43
GRAMD1A-211ENST00000599564 STX18Q9P2W9 335 aaKnown RBP17.76■□□□□ 0.43
GRAMD1A-211ENST00000599564 GTF3C4Q9UKN8 822 aa17.76■□□□□ 0.43
GRAMD1A-211ENST00000599564 VAV3Q9UKW4 847 aa17.76■□□□□ 0.43
GRAMD1A-211ENST00000599564 NEU2Q9Y3R4 380 aa17.76■□□□□ 0.43
GRAMD1A-211ENST00000599564 TYROBPO43914 113 aa17.76■□□□□ 0.43
GRAMD1A-211ENST00000599564 ZRSR2Q15696 482 aaKnown RBP17.76■□□□□ 0.43
GRAMD1A-211ENST00000599564 ANKS1BQ7Z6G8 1248 aa17.76■□□□□ 0.43
GRAMD1A-211ENST00000599564 ZBED8Q8IZ13 594 aa17.76■□□□□ 0.43
GRAMD1A-211ENST00000599564 CLPTM1LQ96KA5 538 aa17.76■□□□□ 0.43
GRAMD1A-211ENST00000599564 SLC17A7Q9P2U7 560 aa17.76■□□□□ 0.43
GRAMD1A-211ENST00000599564 SMG5Q9UPR3 1016 aaKnown RBP17.76■□□□□ 0.43
GRAMD1A-211ENST00000599564 TAF1LQ8IZX4 1826 aa17.76■□□□□ 0.43
GRAMD1A-211ENST00000599564 SRCAPQ6ZRS2 3230 aa17.76■□□□□ 0.43
GRAMD1A-211ENST00000599564 BAG2O95816 211 aa17.76■□□□□ 0.43
GRAMD1A-211ENST00000599564 ESRRAP11474 423 aaPredicted RBP17.76■□□□□ 0.43
GRAMD1A-211ENST00000599564 CD58P19256 250 aa17.76■□□□□ 0.43
GRAMD1A-211ENST00000599564 RXRBP28702 533 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms