RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 WDR5BQ86VZ2 330 aa15.29■□□□□ 0.04
SHKBP1-218ENST00000598907 SLFN12Q8IYM2 578 aa15.29■□□□□ 0.04
SHKBP1-218ENST00000598907 LNX1Q8TBB1 728 aaPredicted RBP15.29■□□□□ 0.04
SHKBP1-218ENST00000598907 PIK3R5Q8WYR1 880 aa15.29■□□□□ 0.04
SHKBP1-218ENST00000598907 CPB2Q96IY4 423 aa15.29■□□□□ 0.04
SHKBP1-218ENST00000598907 NIFKQ9BYG3 293 aaKnown RBP15.29■□□□□ 0.04
SHKBP1-218ENST00000598907 NXF3Q9H4D5 531 aaKnown RBP15.29■□□□□ 0.04
SHKBP1-218ENST00000598907 ZFP14Q9HCL3 533 aa15.29■□□□□ 0.04
SHKBP1-218ENST00000598907 KLK14Q9P0G3 267 aa15.29■□□□□ 0.04
SHKBP1-218ENST00000598907 PCDHA7Q9UN72 937 aa15.29■□□□□ 0.04
SHKBP1-218ENST00000598907 PDCD11Q14690 1871 aaKnown RBP15.29■□□□□ 0.04
SHKBP1-218ENST00000598907 ASH1LQ9NR48 2969 aaKnown RBP15.28■□□□□ 0.04
SHKBP1-218ENST00000598907 CASTOR2A6NHX0 329 aa15.28■□□□□ 0.04
SHKBP1-218ENST00000598907 SLC38A8A6NNN8 435 aa15.28■□□□□ 0.04
SHKBP1-218ENST00000598907 DDX11L8A8MPP1 907 aa15.28■□□□□ 0.04
SHKBP1-218ENST00000598907 PSMD10O75832 226 aa15.28■□□□□ 0.04
SHKBP1-218ENST00000598907 KIF4AO95239 1232 aa15.28■□□□□ 0.04
SHKBP1-218ENST00000598907 AKAP5P24588 427 aa15.28■□□□□ 0.04
SHKBP1-218ENST00000598907 MARCKSP29966 332 aaPredicted RBP15.28■□□□□ 0.04
SHKBP1-218ENST00000598907 FXR2P51116 673 aaKnown RBP eCLIP15.28■□□□□ 0.04
SHKBP1-218ENST00000598907 SOWAHCQ53LP3 525 aaPredicted RBP15.28■□□□□ 0.04
SHKBP1-218ENST00000598907 VITQ6UXI7 678 aa15.28■□□□□ 0.04
SHKBP1-218ENST00000598907 MIER3Q7Z3K6 550 aa15.28■□□□□ 0.04
SHKBP1-218ENST00000598907 CACNA2D4Q7Z3S7 1137 aa15.28■□□□□ 0.04
SHKBP1-218ENST00000598907 KRI1Q8N9T8 703 aaKnown RBP15.28■□□□□ 0.04
SHKBP1-218ENST00000598907 GAB3Q8WWW8 586 aa15.28■□□□□ 0.04
SHKBP1-218ENST00000598907 TCEAL4Q96EI5 215 aa15.28■□□□□ 0.04
SHKBP1-218ENST00000598907 LOXL4Q96JB6 756 aa15.28■□□□□ 0.04
SHKBP1-218ENST00000598907 RIT2Q99578 217 aa15.28■□□□□ 0.04
SHKBP1-218ENST00000598907 TEKT3Q9BXF9 490 aa15.28■□□□□ 0.04
SHKBP1-218ENST00000598907 TRIM6Q9C030 488 aaPredicted RBP15.28■□□□□ 0.04
SHKBP1-218ENST00000598907 SPAG17Q6Q759 2223 aa15.27■□□□□ 0.04
SHKBP1-218ENST00000598907 CUTAO60888 179 aa15.27■□□□□ 0.04
SHKBP1-218ENST00000598907 STBD1O95210 358 aa15.27■□□□□ 0.04
SHKBP1-218ENST00000598907 PAPSS2O95340 614 aaPredicted RBP15.27■□□□□ 0.04
SHKBP1-218ENST00000598907 POU2F2P09086 479 aa15.27■□□□□ 0.04
SHKBP1-218ENST00000598907 SFNP31947 248 aa15.27■□□□□ 0.04
SHKBP1-218ENST00000598907 OR1D2P34982 312 aa15.27■□□□□ 0.04
SHKBP1-218ENST00000598907 TXKP42681 527 aa15.27■□□□□ 0.04
SHKBP1-218ENST00000598907 GRIN1Q05586 938 aa15.27■□□□□ 0.04
SHKBP1-218ENST00000598907 SPIRE1Q08AE8 756 aa15.27■□□□□ 0.04
SHKBP1-218ENST00000598907 PDIA5Q14554 519 aa15.27■□□□□ 0.04
SHKBP1-218ENST00000598907 PLA2G2CQ5R387 149 aa15.27■□□□□ 0.04
SHKBP1-218ENST00000598907 LRCH2Q5VUJ6 765 aa15.27■□□□□ 0.04
SHKBP1-218ENST00000598907 ADALQ6DHV7 355 aa15.27■□□□□ 0.04
SHKBP1-218ENST00000598907 DTHD1Q6ZMT9 781 aa15.27■□□□□ 0.04
SHKBP1-218ENST00000598907 SRGAP1Q7Z6B7 1085 aa15.27■□□□□ 0.04
SHKBP1-218ENST00000598907 MAP4K3Q8IVH8 894 aa15.27■□□□□ 0.04
SHKBP1-218ENST00000598907 IGSF22Q8N9C0 903 aa15.27■□□□□ 0.04
SHKBP1-218ENST00000598907 ZNF579Q8NAF0 562 aaKnown RBP15.27■□□□□ 0.04
SHKBP1-218ENST00000598907 TMEM143Q96AN5 459 aa15.27■□□□□ 0.04
SHKBP1-218ENST00000598907 CORO1BQ9BR76 489 aa15.27■□□□□ 0.04
SHKBP1-218ENST00000598907 TTC12Q9H892 705 aaPredicted RBP15.27■□□□□ 0.04
SHKBP1-218ENST00000598907 VPS45Q9NRW7 570 aa15.27■□□□□ 0.04
SHKBP1-218ENST00000598907 VAV3Q9UKW4 847 aa15.27■□□□□ 0.04
SHKBP1-218ENST00000598907 NCANO14594 1321 aa15.26■□□□□ 0.03
SHKBP1-218ENST00000598907 ZNF263O14978 683 aa15.26■□□□□ 0.03
SHKBP1-218ENST00000598907 HYAL3O43820 417 aaPredicted RBP15.26■□□□□ 0.03
SHKBP1-218ENST00000598907 TSPAN1O60635 241 aa15.26■□□□□ 0.03
SHKBP1-218ENST00000598907 PSMC3P17980 439 aa15.26■□□□□ 0.03
SHKBP1-218ENST00000598907 MCM4P33991 863 aa15.26■□□□□ 0.03
SHKBP1-218ENST00000598907 LONP1P36776 959 aaKnown RBP15.26■□□□□ 0.03
SHKBP1-218ENST00000598907 VIPR2P41587 438 aa15.26■□□□□ 0.03
SHKBP1-218ENST00000598907 RAP1GAPP47736 663 aa15.26■□□□□ 0.03
SHKBP1-218ENST00000598907 KPNA1P52294 538 aaPredicted RBP15.26■□□□□ 0.03
SHKBP1-218ENST00000598907 GRIK3Q13003 919 aa15.26■□□□□ 0.03
SHKBP1-218ENST00000598907 WDR44Q5JSH3 913 aa15.26■□□□□ 0.03
SHKBP1-218ENST00000598907 TTC8Q8TAM2 541 aa15.26■□□□□ 0.03
SHKBP1-218ENST00000598907 PRPF31Q8WWY3 499 aaKnown RBP15.26■□□□□ 0.03
SHKBP1-218ENST00000598907 CLIC6Q96NY7 704 aa15.26■□□□□ 0.03
SHKBP1-218ENST00000598907 LMBRD1Q9NUN5 540 aa15.26■□□□□ 0.03
SHKBP1-218ENST00000598907 PCDHA12Q9UN75 941 aa15.26■□□□□ 0.03
SHKBP1-218ENST00000598907 VWA8A3KMH1 1905 aa15.25■□□□□ 0.03
SHKBP1-218ENST00000598907 A0A1W2PQ27 194 aa15.25■□□□□ 0.03
SHKBP1-218ENST00000598907 A0A1W2PQ64 194 aa15.25■□□□□ 0.03
SHKBP1-218ENST00000598907 A0A1W2PQD8 194 aa15.25■□□□□ 0.03
SHKBP1-218ENST00000598907 VWA3AA6NCI4 1184 aa15.25■□□□□ 0.03
SHKBP1-218ENST00000598907 EXTL3O43909 919 aa15.25■□□□□ 0.03
SHKBP1-218ENST00000598907 LRG1P02750 347 aa15.25■□□□□ 0.03
SHKBP1-218ENST00000598907 ME1P48163 572 aa15.25■□□□□ 0.03
SHKBP1-218ENST00000598907 NPEPPSP55786 919 aa15.25■□□□□ 0.03
SHKBP1-218ENST00000598907 LAMTOR4Q0VGL1 99 aa15.25■□□□□ 0.03
SHKBP1-218ENST00000598907 PPP2R5CQ13362 524 aa15.25■□□□□ 0.03
SHKBP1-218ENST00000598907 DAB2IPQ5VWQ8 1189 aa15.25■□□□□ 0.03
SHKBP1-218ENST00000598907 NOTUMQ6P988 496 aa15.25■□□□□ 0.03
SHKBP1-218ENST00000598907 ANO5Q75V66 913 aa15.25■□□□□ 0.03
SHKBP1-218ENST00000598907 PDZD3Q86UT5 571 aa15.25■□□□□ 0.03
SHKBP1-218ENST00000598907 CDR2LQ86X02 465 aaPredicted RBP15.25■□□□□ 0.03
SHKBP1-218ENST00000598907 HACE1Q8IYU2 909 aa15.25■□□□□ 0.03
SHKBP1-218ENST00000598907 RNF149Q8NC42 400 aa15.25■□□□□ 0.03
SHKBP1-218ENST00000598907 GSTCDQ8NEC7 633 aa15.25■□□□□ 0.03
SHKBP1-218ENST00000598907 FAM200AQ8TCP9 573 aa15.25■□□□□ 0.03
SHKBP1-218ENST00000598907 CSGALNACT1Q8TDX6 532 aa15.25■□□□□ 0.03
SHKBP1-218ENST00000598907 PSPC1Q8WXF1 523 aaKnown RBP15.25■□□□□ 0.03
SHKBP1-218ENST00000598907 SLC7A3Q8WY07 619 aa15.25■□□□□ 0.03
SHKBP1-218ENST00000598907 ASB16Q96NS5 453 aa15.25■□□□□ 0.03
SHKBP1-218ENST00000598907 JPH2Q9BR39 696 aaPredicted RBP15.25■□□□□ 0.03
SHKBP1-218ENST00000598907 CSRNP2Q9H175 543 aa15.25■□□□□ 0.03
SHKBP1-218ENST00000598907 PARP2Q9UGN5 583 aa15.25■□□□□ 0.03
SHKBP1-218ENST00000598907 KLK13Q9UKR3 277 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms