RNA–Protein interactions for RNA: ENST00000598111.6

PDE4C-213, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best) BASIC

Gene PDE4C, Length 1,284 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-213ENST00000598111 C2CD2Q9Y426 696 aa13.37□□□□□ -0.27
PDE4C-213ENST00000598111 NR2E1Q9Y466 385 aa13.37□□□□□ -0.27
PDE4C-213ENST00000598111 SCN1AP35498 2009 aa13.37□□□□□ -0.27
PDE4C-213ENST00000598111 C19orf67A6NJJ6 358 aa13.36□□□□□ -0.27
PDE4C-213ENST00000598111 H7C4K7 107 aa13.36□□□□□ -0.27
PDE4C-213ENST00000598111 EXTL3O43909 919 aa13.36□□□□□ -0.27
PDE4C-213ENST00000598111 MYL1P05976 194 aa13.36□□□□□ -0.27
PDE4C-213ENST00000598111 SPATA31D3P0C874 917 aa13.36□□□□□ -0.27
PDE4C-213ENST00000598111 SP100P23497 879 aaPredicted RBP13.36□□□□□ -0.27
PDE4C-213ENST00000598111 IGFBP6P24592 240 aaPredicted RBP13.36□□□□□ -0.27
PDE4C-213ENST00000598111 ZBTB6Q15916 424 aa13.36□□□□□ -0.27
PDE4C-213ENST00000598111 VARS2Q5ST30 1063 aaKnown RBP13.36□□□□□ -0.27
PDE4C-213ENST00000598111 SPATA1Q5VX52 437 aa13.36□□□□□ -0.27
PDE4C-213ENST00000598111 ZNF280DQ6N043 979 aa13.36□□□□□ -0.27
PDE4C-213ENST00000598111 KANK3Q6NY19 840 aa13.36□□□□□ -0.27
PDE4C-213ENST00000598111 CD300LGQ6UXG3 332 aa13.36□□□□□ -0.27
PDE4C-213ENST00000598111 C15orf39Q6ZRI6 1047 aa13.36□□□□□ -0.27
PDE4C-213ENST00000598111 SPATA31D4Q6ZUB0 917 aa13.36□□□□□ -0.27
PDE4C-213ENST00000598111 CCDC149Q6ZUS6 474 aa13.36□□□□□ -0.27
PDE4C-213ENST00000598111 HS2ST1Q7LGA3 356 aa13.36□□□□□ -0.27
PDE4C-213ENST00000598111 NT5DC4Q86YG4 428 aa13.36□□□□□ -0.27
PDE4C-213ENST00000598111 BRSK2Q8IWQ3 736 aa13.36□□□□□ -0.27
PDE4C-213ENST00000598111 NELFCDQ8IXH7 590 aa13.36□□□□□ -0.27
PDE4C-213ENST00000598111 GPD1LQ8N335 351 aa13.36□□□□□ -0.27
PDE4C-213ENST00000598111 KREMEN2Q8NCW0 462 aa13.36□□□□□ -0.27
PDE4C-213ENST00000598111 APPL2Q8NEU8 664 aa13.36□□□□□ -0.27
PDE4C-213ENST00000598111 CMASQ8NFW8 434 aaPredicted RBP13.36□□□□□ -0.27
PDE4C-213ENST00000598111 HDAC7Q8WUI4 952 aa13.36□□□□□ -0.27
PDE4C-213ENST00000598111 PAGE5Q96GU1 130 aa13.36□□□□□ -0.27
PDE4C-213ENST00000598111 CLSTN3Q9BQT9 956 aa13.36□□□□□ -0.27
PDE4C-213ENST00000598111 PCIF1Q9H4Z3 704 aa13.36□□□□□ -0.27
PDE4C-213ENST00000598111 FBXW11Q9UKB1 542 aa13.36□□□□□ -0.27
PDE4C-213ENST00000598111 PCDHB8Q9UN66 801 aa13.36□□□□□ -0.27
PDE4C-213ENST00000598111 BACE2Q9Y5Z0 518 aa13.36□□□□□ -0.27
PDE4C-213ENST00000598111 CDY1Q9Y6F8 540 aa13.36□□□□□ -0.27
PDE4C-213ENST00000598111 VCANP13611 3396 aa13.36□□□□□ -0.27
PDE4C-213ENST00000598111 FAM237AA0A1B0GTK4 181 aa13.35□□□□□ -0.27
PDE4C-213ENST00000598111 CCDC195A0A1B0GUA6 201 aa13.35□□□□□ -0.27
PDE4C-213ENST00000598111 ARHGEF37A1IGU5 675 aa13.35□□□□□ -0.27
PDE4C-213ENST00000598111 GOLGA8IPA6NC78 632 aa13.35□□□□□ -0.27
PDE4C-213ENST00000598111 GOLGA8JA6NMD2 632 aa13.35□□□□□ -0.27
PDE4C-213ENST00000598111 OR1D2P34982 312 aa13.35□□□□□ -0.27
PDE4C-213ENST00000598111 ANP32AP39687 249 aaKnown RBP13.35□□□□□ -0.27
PDE4C-213ENST00000598111 EHHADHQ08426 723 aa13.35□□□□□ -0.27
PDE4C-213ENST00000598111 CTXN3Q4LDR2 81 aa13.35□□□□□ -0.27
PDE4C-213ENST00000598111 CRELD2Q6UXH1 353 aaPredicted RBP13.35□□□□□ -0.27
PDE4C-213ENST00000598111 DSTYKQ6XUX3 929 aa13.35□□□□□ -0.27
PDE4C-213ENST00000598111 EPM2AIP1Q7L775 607 aaPredicted RBP13.35□□□□□ -0.27
PDE4C-213ENST00000598111 GPR149Q86SP6 731 aa13.35□□□□□ -0.27
PDE4C-213ENST00000598111 EFCAB13Q8IY85 973 aa13.35□□□□□ -0.27
PDE4C-213ENST00000598111 TDRD5Q8NAT2 981 aaKnown RBP13.35□□□□□ -0.27
PDE4C-213ENST00000598111 SMG7Q92540 1137 aaKnown RBP13.35□□□□□ -0.27
PDE4C-213ENST00000598111 GOLPH3LQ9H4A5 285 aa13.35□□□□□ -0.27
PDE4C-213ENST00000598111 PIDD1Q9HB75 910 aa13.35□□□□□ -0.27
PDE4C-213ENST00000598111 SLC39A2Q9NP94 309 aa13.35□□□□□ -0.27
PDE4C-213ENST00000598111 ZDHHC7Q9NXF8 308 aa13.35□□□□□ -0.27
PDE4C-213ENST00000598111 SPTBN5Q9NRC6 3674 aaKnown RBP13.34□□□□□ -0.27
PDE4C-213ENST00000598111 LOC730098B7Z3J9 87 aa13.34□□□□□ -0.27
PDE4C-213ENST00000598111 ADAM12O43184 909 aa13.34□□□□□ -0.27
PDE4C-213ENST00000598111 RFPL2O75678 378 aa13.34□□□□□ -0.27
PDE4C-213ENST00000598111 PAX3P23760 479 aa13.34□□□□□ -0.27
PDE4C-213ENST00000598111 TFAMQ00059 246 aaKnown RBP13.34□□□□□ -0.27
PDE4C-213ENST00000598111 YWHAHQ04917 246 aaPredicted RBP13.34□□□□□ -0.27
PDE4C-213ENST00000598111 RAB33AQ14088 237 aa13.34□□□□□ -0.27
PDE4C-213ENST00000598111 KMT5BQ4FZB7 885 aa13.34□□□□□ -0.27
PDE4C-213ENST00000598111 PPM1LQ5SGD2 360 aa13.34□□□□□ -0.27
PDE4C-213ENST00000598111 C9orf57Q5W0N0 161 aa13.34□□□□□ -0.27
PDE4C-213ENST00000598111 CYP26C1Q6V0L0 522 aa13.34□□□□□ -0.27
PDE4C-213ENST00000598111 KRBA2Q6ZNG9 492 aa13.34□□□□□ -0.27
PDE4C-213ENST00000598111 USP37Q86T82 979 aa13.34□□□□□ -0.27
PDE4C-213ENST00000598111 TMEM130Q8N3G9 435 aa13.34□□□□□ -0.27
PDE4C-213ENST00000598111 ZNF507Q8TCN5 953 aa13.34□□□□□ -0.27
PDE4C-213ENST00000598111 SCFD1Q8WVM8 642 aa13.34□□□□□ -0.27
PDE4C-213ENST00000598111 ZNF560Q96MR9 790 aa13.34□□□□□ -0.27
PDE4C-213ENST00000598111 KIAA1586Q9HCI6 787 aa13.34□□□□□ -0.27
PDE4C-213ENST00000598111 AGPAT3Q9NRZ7 376 aa13.34□□□□□ -0.27
PDE4C-213ENST00000598111 HSPBP1Q9NZL4 362 aa13.34□□□□□ -0.27
PDE4C-213ENST00000598111 ZNF233A6NK53 670 aa13.33□□□□□ -0.28
PDE4C-213ENST00000598111 PPEF2O14830 753 aa13.33□□□□□ -0.28
PDE4C-213ENST00000598111 DCXO43602 365 aa13.33□□□□□ -0.28
PDE4C-213ENST00000598111 KLRC4O43908 158 aa13.33□□□□□ -0.28
PDE4C-213ENST00000598111 ZMYND10O75800 440 aa13.33□□□□□ -0.28
PDE4C-213ENST00000598111 C8AP07357 584 aa13.33□□□□□ -0.28
PDE4C-213ENST00000598111 HNRNPA1P09651 372 aaKnown RBP eCLIP13.33□□□□□ -0.28
PDE4C-213ENST00000598111 TMEM191BP0C7N4 346 aa13.33□□□□□ -0.28
PDE4C-213ENST00000598111 ODC1P11926 461 aa13.33□□□□□ -0.28
PDE4C-213ENST00000598111 ALADP13716 330 aa13.33□□□□□ -0.28
PDE4C-213ENST00000598111 CPB1P15086 417 aa13.33□□□□□ -0.28
PDE4C-213ENST00000598111 HOXD13P35453 343 aa13.33□□□□□ -0.28
PDE4C-213ENST00000598111 AARSP49588 968 aaKnown RBP eCLIP13.33□□□□□ -0.28
PDE4C-213ENST00000598111 TAF6P49848 677 aa13.33□□□□□ -0.28
PDE4C-213ENST00000598111 CYP2J2P51589 502 aa13.33□□□□□ -0.28
PDE4C-213ENST00000598111 ARPP19P56211 112 aa13.33□□□□□ -0.28
PDE4C-213ENST00000598111 SNRPFP62306 86 aaKnown RBP13.33□□□□□ -0.28
PDE4C-213ENST00000598111 ROR1Q01973 937 aa13.33□□□□□ -0.28
PDE4C-213ENST00000598111 PSMD2Q13200 908 aa13.33□□□□□ -0.28
PDE4C-213ENST00000598111 BMT2Q1RMZ1 405 aa13.33□□□□□ -0.28
PDE4C-213ENST00000598111 SLC8B1Q6J4K2 584 aa13.33□□□□□ -0.28
PDE4C-213ENST00000598111 LILRA6Q6PI73 481 aa13.33□□□□□ -0.28
PDE4C-213ENST00000598111 RNF135Q8IUD6 432 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms