RNA–Protein interactions for RNA: ENST00000596860.1

SNRPA-202, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 2

Gene SNRPA, Length 336 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-202ENST00000596860 DGKIO75912 1065 aa9.44□□□□□ -0.9
SNRPA-202ENST00000596860 VNN1O95497 513 aa9.44□□□□□ -0.9
SNRPA-202ENST00000596860 TRIM21P19474 475 aaKnown RBP9.44□□□□□ -0.9
SNRPA-202ENST00000596860 PIK3CAP42336 1068 aa9.44□□□□□ -0.9
SNRPA-202ENST00000596860 AARSP49588 968 aaKnown RBP eCLIP9.44□□□□□ -0.9
SNRPA-202ENST00000596860 YWHAEP62258 255 aaKnown RBP9.44□□□□□ -0.9
SNRPA-202ENST00000596860 TCTN1Q2MV58 587 aa9.44□□□□□ -0.9
SNRPA-202ENST00000596860 CLLU1OSQ5K130 101 aa9.44□□□□□ -0.9
SNRPA-202ENST00000596860 C9orf57Q5W0N0 161 aa9.44□□□□□ -0.9
SNRPA-202ENST00000596860 C16orf59Q7L2K0 433 aa9.44□□□□□ -0.9
SNRPA-202ENST00000596860 DPH6Q7L8W6 267 aa9.44□□□□□ -0.9
SNRPA-202ENST00000596860 CNGA4Q8IV77 575 aa9.44□□□□□ -0.9
SNRPA-202ENST00000596860 DRC7Q8IY82 874 aa9.44□□□□□ -0.9
SNRPA-202ENST00000596860 ZNF397Q8NF99 534 aaPredicted RBP9.44□□□□□ -0.9
SNRPA-202ENST00000596860 TAS1R2Q8TE23 839 aa9.44□□□□□ -0.9
SNRPA-202ENST00000596860 ZNF689Q96CS4 500 aaPredicted RBP9.44□□□□□ -0.9
SNRPA-202ENST00000596860 FAM212AQ96EL1 285 aa9.44□□□□□ -0.9
SNRPA-202ENST00000596860 CASD1Q96PB1 797 aa9.44□□□□□ -0.9
SNRPA-202ENST00000596860 APOL6Q9BWW8 343 aa9.44□□□□□ -0.9
SNRPA-202ENST00000596860 NAA15Q9BXJ9 866 aaKnown RBP9.44□□□□□ -0.9
SNRPA-202ENST00000596860 INTS2Q9H0H0 1204 aaKnown RBP9.44□□□□□ -0.9
SNRPA-202ENST00000596860 XYLT2Q9H1B5 865 aa9.44□□□□□ -0.9
SNRPA-202ENST00000596860 CYP3A43Q9HB55 503 aa9.44□□□□□ -0.9
SNRPA-202ENST00000596860 SIX2Q9NPC8 291 aa9.44□□□□□ -0.9
SNRPA-202ENST00000596860 SIX4Q9UIU6 781 aa9.44□□□□□ -0.9
SNRPA-202ENST00000596860 CAPN11Q9UMQ6 739 aa9.44□□□□□ -0.9
SNRPA-202ENST00000596860 MEIS3P2A8K0S8 358 aa9.43□□□□□ -0.9
SNRPA-202ENST00000596860 NOL4O94818 638 aa9.43□□□□□ -0.9
SNRPA-202ENST00000596860 GJB5O95377 273 aa9.43□□□□□ -0.9
SNRPA-202ENST00000596860 CCDC172P0C7W6 258 aa9.43□□□□□ -0.9
SNRPA-202ENST00000596860 UCHL3P15374 230 aa9.43□□□□□ -0.9
SNRPA-202ENST00000596860 HNRNPH3P31942 346 aaKnown RBP9.43□□□□□ -0.9
SNRPA-202ENST00000596860 TAF6P49848 677 aa9.43□□□□□ -0.9
SNRPA-202ENST00000596860 SCNN1GP51170 649 aa9.43□□□□□ -0.9
SNRPA-202ENST00000596860 NOP14P78316 857 aaKnown RBP9.43□□□□□ -0.9
SNRPA-202ENST00000596860 HTRA4P83105 476 aaPredicted RBP9.43□□□□□ -0.9
SNRPA-202ENST00000596860 ZBED6P86452 979 aa9.43□□□□□ -0.9
SNRPA-202ENST00000596860 UPP1Q16831 310 aa9.43□□□□□ -0.9
SNRPA-202ENST00000596860 SV2CQ496J9 727 aa9.43□□□□□ -0.9
SNRPA-202ENST00000596860 ZNF667Q5HYK9 610 aa9.43□□□□□ -0.9
SNRPA-202ENST00000596860 DCLRE1AQ6PJP8 1040 aa9.43□□□□□ -0.9
SNRPA-202ENST00000596860 CHRDL2Q6WN34 429 aa9.43□□□□□ -0.9
SNRPA-202ENST00000596860 ZNF365Q70YC5 407 aa9.43□□□□□ -0.9
SNRPA-202ENST00000596860 LIMS2Q7Z4I7 341 aa9.43□□□□□ -0.9
SNRPA-202ENST00000596860 PPFIBP1Q86W92 1011 aa9.43□□□□□ -0.9
SNRPA-202ENST00000596860 COLGALT2Q8IYK4 626 aa9.43□□□□□ -0.9
SNRPA-202ENST00000596860 GPR65Q8IYL9 337 aa9.43□□□□□ -0.9
SNRPA-202ENST00000596860 HELQQ8TDG4 1101 aa9.43□□□□□ -0.9
SNRPA-202ENST00000596860 SEMA4DQ92854 862 aa9.43□□□□□ -0.9
SNRPA-202ENST00000596860 LPPQ93052 612 aa9.43□□□□□ -0.9
SNRPA-202ENST00000596860 ZFP42Q96MM3 310 aa9.43□□□□□ -0.9
SNRPA-202ENST00000596860 LSM14BQ9BX40 385 aaKnown RBP9.43□□□□□ -0.9
SNRPA-202ENST00000596860 STK33Q9BYT3 514 aa9.43□□□□□ -0.9
SNRPA-202ENST00000596860 BCO2Q9BYV7 579 aa9.43□□□□□ -0.9
SNRPA-202ENST00000596860 DNAI2Q9GZS0 605 aa9.43□□□□□ -0.9
SNRPA-202ENST00000596860 NIF3L1Q9GZT8 377 aa9.43□□□□□ -0.9
SNRPA-202ENST00000596860 GANQ9H2C0 597 aa9.43□□□□□ -0.9
SNRPA-202ENST00000596860 MMRN2Q9H8L6 949 aa9.43□□□□□ -0.9
SNRPA-202ENST00000596860 TBC1D13Q9NVG8 400 aa9.43□□□□□ -0.9
SNRPA-202ENST00000596860 MIOSQ9NXC5 875 aa9.43□□□□□ -0.9
SNRPA-202ENST00000596860 KLK14Q9P0G3 267 aa9.43□□□□□ -0.9
SNRPA-202ENST00000596860 CNTN6Q9UQ52 1028 aa9.43□□□□□ -0.9
SNRPA-202ENST00000596860 TACC1O75410 805 aa9.42□□□□□ -0.9
SNRPA-202ENST00000596860 CST3P01034 146 aaPredicted RBP9.42□□□□□ -0.9
SNRPA-202ENST00000596860 GYPCP04921 128 aa9.42□□□□□ -0.9
SNRPA-202ENST00000596860 ITGB3P05106 788 aa9.42□□□□□ -0.9
SNRPA-202ENST00000596860 SLC9A1P19634 815 aa9.42□□□□□ -0.9
SNRPA-202ENST00000596860 ANXA13P27216 316 aa9.42□□□□□ -0.9
SNRPA-202ENST00000596860 POLR2BP30876 1174 aaKnown RBP9.42□□□□□ -0.9
SNRPA-202ENST00000596860 BMP8BP34820 402 aa9.42□□□□□ -0.9
SNRPA-202ENST00000596860 MFAP3P55082 362 aa9.42□□□□□ -0.9
SNRPA-202ENST00000596860 JAM2P57087 298 aa9.42□□□□□ -0.9
SNRPA-202ENST00000596860 CDK17Q00537 523 aa9.42□□□□□ -0.9
SNRPA-202ENST00000596860 ELAVL2Q12926 359 aaKnown RBP9.42□□□□□ -0.9
SNRPA-202ENST00000596860 ZNF699Q32M78 642 aa9.42□□□□□ -0.9
SNRPA-202ENST00000596860 LMBRD2Q68DH5 695 aaPredicted RBP9.42□□□□□ -0.9
SNRPA-202ENST00000596860 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.42□□□□□ -0.9
SNRPA-202ENST00000596860 TMC6Q7Z403 805 aa9.42□□□□□ -0.9
SNRPA-202ENST00000596860 TOP6BLQ8N6T0 577 aa9.42□□□□□ -0.9
SNRPA-202ENST00000596860 RNF169Q8NCN4 708 aa9.42□□□□□ -0.9
SNRPA-202ENST00000596860 SP7Q8TDD2 431 aaPredicted RBP9.42□□□□□ -0.9
SNRPA-202ENST00000596860 SHC3Q92529 594 aa9.42□□□□□ -0.9
SNRPA-202ENST00000596860 HPDLQ96IR7 371 aa9.42□□□□□ -0.9
SNRPA-202ENST00000596860 PCMTD1Q96MG8 357 aaPredicted RBP9.42□□□□□ -0.9
SNRPA-202ENST00000596860 FAM193BQ96PV7 902 aaPredicted RBP9.42□□□□□ -0.9
SNRPA-202ENST00000596860 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.42□□□□□ -0.94e-17■■□□□ 12.9
SNRPA-202ENST00000596860 CRACR2AQ9BSW2 395 aa9.42□□□□□ -0.9
SNRPA-202ENST00000596860 AIPL1Q9NZN9 384 aa9.42□□□□□ -0.9
SNRPA-202ENST00000596860 TUBGCP4Q9UGJ1 667 aa9.42□□□□□ -0.9
SNRPA-202ENST00000596860 DSEQ9UL01 958 aa9.42□□□□□ -0.9
SNRPA-202ENST00000596860 PLAGL2Q9UPG8 496 aa9.42□□□□□ -0.9
SNRPA-202ENST00000596860 AGAP1Q9UPQ3 857 aa9.42□□□□□ -0.9
SNRPA-202ENST00000596860 LUC7L2Q9Y383 392 aaKnown RBP9.42□□□□□ -0.9
SNRPA-202ENST00000596860 RWDD3Q9Y3V2 267 aa9.42□□□□□ -0.9
SNRPA-202ENST00000596860 INSL6Q9Y581 213 aa9.42□□□□□ -0.9
SNRPA-202ENST00000596860 AKR1B15C9JRZ8 316 aaPredicted RBP9.41□□□□□ -0.9
SNRPA-202ENST00000596860 M0QZQ0 153 aa9.41□□□□□ -0.9
SNRPA-202ENST00000596860 PODXLO00592 558 aa9.41□□□□□ -0.9
SNRPA-202ENST00000596860 TRAPPC3O43617 180 aa9.41□□□□□ -0.9
SNRPA-202ENST00000596860 NRDCO43847 1150 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms