RNA–Protein interactions for RNA: ENST00000596788.1

IRF3-214, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-214ENST00000596788 ARHGEF19Q8IW93 802 aa22.46■■□□□ 1.19
IRF3-214ENST00000596788 LRRC43Q8N309 656 aa22.46■■□□□ 1.19
IRF3-214ENST00000596788 RSPH1Q8WYR4 309 aa22.46■■□□□ 1.19
IRF3-214ENST00000596788 MRPL9Q9BYD2 267 aaKnown RBP22.46■■□□□ 1.19
IRF3-214ENST00000596788 APOBEC3GQ9HC16 384 aaKnown RBP22.46■■□□□ 1.19
IRF3-214ENST00000596788 PLCB1Q9NQ66 1216 aa22.46■■□□□ 1.19
IRF3-214ENST00000596788 AJAP1Q9UKB5 411 aaPredicted RBP22.46■■□□□ 1.19
IRF3-214ENST00000596788 TSC2P49815 1807 aa22.45■■□□□ 1.19
IRF3-214ENST00000596788 GBF1Q92538 1859 aa22.45■■□□□ 1.19
IRF3-214ENST00000596788 PIRO00625 290 aa22.45■■□□□ 1.18
IRF3-214ENST00000596788 LRMPQ12912 555 aa22.45■■□□□ 1.18
IRF3-214ENST00000596788 ZNF699Q32M78 642 aa22.45■■□□□ 1.18
IRF3-214ENST00000596788 C9orf50Q5SZB4 431 aa22.45■■□□□ 1.18
IRF3-214ENST00000596788 GJB7Q6PEY0 223 aa22.45■■□□□ 1.18
IRF3-214ENST00000596788 LRRC52Q8N7C0 313 aa22.45■■□□□ 1.18
IRF3-214ENST00000596788 NEK11Q8NG66 645 aa22.45■■□□□ 1.18
IRF3-214ENST00000596788 ZNF689Q96CS4 500 aaPredicted RBP22.45■■□□□ 1.18
IRF3-214ENST00000596788 NT5C1BQ96P26 610 aa22.45■■□□□ 1.18
IRF3-214ENST00000596788 SLC9A7Q96T83 725 aa22.45■■□□□ 1.18
IRF3-214ENST00000596788 PAAF1Q9BRP4 392 aa22.45■■□□□ 1.18
IRF3-214ENST00000596788 TTYH3Q9C0H2 523 aa22.45■■□□□ 1.18
IRF3-214ENST00000596788 SLC4A7Q9Y6M7 1214 aa22.45■■□□□ 1.18
IRF3-214ENST00000596788 H0YGN5 161 aa22.44■■□□□ 1.18
IRF3-214ENST00000596788 PODXLO00592 558 aa22.44■■□□□ 1.18
IRF3-214ENST00000596788 ZC3H11AO75152 810 aaKnown RBP eCLIP22.44■■□□□ 1.18
IRF3-214ENST00000596788 CLCNKBP51801 687 aa22.44■■□□□ 1.18
IRF3-214ENST00000596788 RNASELQ05823 741 aaKnown RBP22.44■■□□□ 1.18
IRF3-214ENST00000596788 KLHDC7AQ5VTJ3 777 aa22.44■■□□□ 1.18
IRF3-214ENST00000596788 PHLDB3Q6NSJ2 640 aa22.44■■□□□ 1.18
IRF3-214ENST00000596788 COLGALT2Q8IYK4 626 aa22.44■■□□□ 1.18
IRF3-214ENST00000596788 RABGGTAQ92696 567 aa22.44■■□□□ 1.18
IRF3-214ENST00000596788 TATDN2Q93075 761 aa22.44■■□□□ 1.18
IRF3-214ENST00000596788 HPDLQ96IR7 371 aa22.44■■□□□ 1.18
IRF3-214ENST00000596788 IMPG2Q9BZV3 1241 aa22.44■■□□□ 1.18
IRF3-214ENST00000596788 MTIF3Q9H2K0 278 aaKnown RBP22.44■■□□□ 1.18
IRF3-214ENST00000596788 NRDE2Q9H7Z3 1164 aa22.44■■□□□ 1.18
IRF3-214ENST00000596788 APEX2Q9UBZ4 518 aa22.44■■□□□ 1.18
IRF3-214ENST00000596788 DNAJB4Q9UDY4 337 aa22.44■■□□□ 1.18
IRF3-214ENST00000596788 NUB1Q9Y5A7 615 aa22.44■■□□□ 1.18
IRF3-214ENST00000596788 FHOD1Q9Y613 1164 aa22.44■■□□□ 1.18
IRF3-214ENST00000596788 CLSTN1O94985 981 aa22.43■■□□□ 1.18
IRF3-214ENST00000596788 GJB5O95377 273 aa22.43■■□□□ 1.18
IRF3-214ENST00000596788 STAU1O95793 577 aaKnown RBP22.43■■□□□ 1.18
IRF3-214ENST00000596788 IGFBP6P24592 240 aaPredicted RBP22.43■■□□□ 1.18
IRF3-214ENST00000596788 ATICP31939 592 aa22.43■■□□□ 1.18
IRF3-214ENST00000596788 RPL9P32969 192 aaKnown RBP22.43■■□□□ 1.18
IRF3-214ENST00000596788 RGS19P49795 217 aa22.43■■□□□ 1.18
IRF3-214ENST00000596788 UPP1Q16831 310 aa22.43■■□□□ 1.18
IRF3-214ENST00000596788 SGSM1Q2NKQ1 1148 aa22.43■■□□□ 1.18
IRF3-214ENST00000596788 WDR44Q5JSH3 913 aa22.43■■□□□ 1.18
IRF3-214ENST00000596788 CMTR2Q8IYT2 770 aaKnown RBP22.43■■□□□ 1.18
IRF3-214ENST00000596788 SPC24Q8NBT2 197 aa22.43■■□□□ 1.18
IRF3-214ENST00000596788 CCDC150Q8NCX0 1101 aa22.43■■□□□ 1.18
IRF3-214ENST00000596788 C3orf58Q8NDZ4 430 aa22.43■■□□□ 1.18
IRF3-214ENST00000596788 ANP32BQ92688 251 aaKnown RBP22.43■■□□□ 1.18
IRF3-214ENST00000596788 TAF4BQ92750 862 aa22.43■■□□□ 1.18
IRF3-214ENST00000596788 ZNF560Q96MR9 790 aa22.43■■□□□ 1.18
IRF3-214ENST00000596788 UROC1Q96N76 676 aa22.43■■□□□ 1.18
IRF3-214ENST00000596788 VRTNQ9H8Y1 702 aa22.43■■□□□ 1.18
IRF3-214ENST00000596788 GYPCP04921 128 aa22.42■■□□□ 1.18
IRF3-214ENST00000596788 UCHL3P15374 230 aa22.42■■□□□ 1.18
IRF3-214ENST00000596788 TRIM21P19474 475 aaKnown RBP22.42■■□□□ 1.18
IRF3-214ENST00000596788 HTRA4P83105 476 aaPredicted RBP22.42■■□□□ 1.18
IRF3-214ENST00000596788 TBX2Q13207 712 aaPredicted RBP22.42■■□□□ 1.18
IRF3-214ENST00000596788 FIGNQ5HY92 759 aa22.42■■□□□ 1.18
IRF3-214ENST00000596788 IQCEQ6IPM2 695 aa22.42■■□□□ 1.18
IRF3-214ENST00000596788 HERC6Q8IVU3 1022 aa22.42■■□□□ 1.18
IRF3-214ENST00000596788 DRC7Q8IY82 874 aa22.42■■□□□ 1.18
IRF3-214ENST00000596788 KAT5Q92993 513 aa22.42■■□□□ 1.18
IRF3-214ENST00000596788 DDX27Q96GQ7 796 aaKnown RBP22.42■■□□□ 1.18
IRF3-214ENST00000596788 FAM193BQ96PV7 902 aaPredicted RBP22.42■■□□□ 1.18
IRF3-214ENST00000596788 YME1L1Q96TA2 773 aa22.42■■□□□ 1.18
IRF3-214ENST00000596788 GDF15Q99988 308 aa22.42■■□□□ 1.18
IRF3-214ENST00000596788 POLIQ9UNA4 740 aa22.42■■□□□ 1.18
IRF3-214ENST00000596788 R3HCC1Q9Y3T6 440 aaKnown RBP22.42■■□□□ 1.18
IRF3-214ENST00000596788 F8W810 466 aa22.41■■□□□ 1.18
IRF3-214ENST00000596788 SPTLC1O15269 473 aa22.41■■□□□ 1.18
IRF3-214ENST00000596788 ATP2A2P16615 1042 aaKnown RBP22.41■■□□□ 1.18
IRF3-214ENST00000596788 PNPLA4P41247 253 aa22.41■■□□□ 1.18
IRF3-214ENST00000596788 TAF6P49848 677 aa22.41■■□□□ 1.18
IRF3-214ENST00000596788 POLR2FP61218 127 aaKnown RBP22.41■■□□□ 1.18
IRF3-214ENST00000596788 SHHQ15465 462 aa22.41■■□□□ 1.18
IRF3-214ENST00000596788 ZNF667Q5HYK9 610 aa22.41■■□□□ 1.18
IRF3-214ENST00000596788 CD300LGQ6UXG3 332 aa22.41■■□□□ 1.18
IRF3-214ENST00000596788 RRAGAQ7L523 313 aa22.41■■□□□ 1.18
IRF3-214ENST00000596788 PPM1KQ8N3J5 372 aa22.41■■□□□ 1.18
IRF3-214ENST00000596788 PHOSPHO2Q8TCD6 241 aa22.41■■□□□ 1.18
IRF3-214ENST00000596788 PDLIM2Q96JY6 352 aa22.41■■□□□ 1.18
IRF3-214ENST00000596788 RNPC3Q96LT9 517 aaKnown RBP22.41■■□□□ 1.18
IRF3-214ENST00000596788 KREMEN1Q96MU8 473 aa22.41■■□□□ 1.18
IRF3-214ENST00000596788 ARID3AQ99856 593 aa22.41■■□□□ 1.18
IRF3-214ENST00000596788 NUP58Q9BVL2 599 aa22.41■■□□□ 1.18
IRF3-214ENST00000596788 NAA15Q9BXJ9 866 aaKnown RBP22.41■■□□□ 1.18
IRF3-214ENST00000596788 NIF3L1Q9GZT8 377 aa22.41■■□□□ 1.18
IRF3-214ENST00000596788 CWH43Q9H720 699 aa22.41■■□□□ 1.18
IRF3-214ENST00000596788 CEP72Q9P209 647 aa22.41■■□□□ 1.18
IRF3-214ENST00000596788 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.41■■□□□ 1.18
IRF3-214ENST00000596788 RNF225M0QZC1 329 aaPredicted RBP22.4■■□□□ 1.18
IRF3-214ENST00000596788 CAPN15O75808 1086 aa22.4■■□□□ 1.18
IRF3-214ENST00000596788 KIF4AO95239 1232 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms