RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 BRSK2Q8IWQ3 736 aa22.88■■□□□ 1.25
PNKP-209ENST00000596726 BEST2Q8NFU1 509 aa22.88■■□□□ 1.25
PNKP-209ENST00000596726 PHF7Q9BWX1 381 aaPredicted RBP22.88■■□□□ 1.25
PNKP-209ENST00000596726 PCIF1Q9H4Z3 704 aa22.88■■□□□ 1.25
PNKP-209ENST00000596726 SLC39A2Q9NP94 309 aa22.88■■□□□ 1.25
PNKP-209ENST00000596726 DPP7Q9UHL4 492 aa22.88■■□□□ 1.25
PNKP-209ENST00000596726 CDH22Q9UJ99 828 aa22.88■■□□□ 1.25
PNKP-209ENST00000596726 CIZ1Q9ULV3 898 aaPredicted RBP22.88■■□□□ 1.25
PNKP-209ENST00000596726 NUB1Q9Y5A7 615 aa22.88■■□□□ 1.25
PNKP-209ENST00000596726 BACE2Q9Y5Z0 518 aa22.88■■□□□ 1.25
PNKP-209ENST00000596726 ADAM12O43184 909 aa22.87■■□□□ 1.25
PNKP-209ENST00000596726 EXTL3O43909 919 aa22.87■■□□□ 1.25
PNKP-209ENST00000596726 ZNF202O95125 648 aa22.87■■□□□ 1.25
PNKP-209ENST00000596726 IL18RAPO95256 599 aa22.87■■□□□ 1.25
PNKP-209ENST00000596726 PAPLNO95428 1278 aa22.87■■□□□ 1.25
PNKP-209ENST00000596726 AARSP49588 968 aaKnown RBP eCLIP22.87■■□□□ 1.25
PNKP-209ENST00000596726 WNT7BP56706 349 aa22.87■■□□□ 1.25
PNKP-209ENST00000596726 MRPL58Q14197 206 aaKnown RBP22.87■■□□□ 1.25
PNKP-209ENST00000596726 KMT5BQ4FZB7 885 aa22.87■■□□□ 1.25
PNKP-209ENST00000596726 KRBA2Q6ZNG9 492 aa22.87■■□□□ 1.25
PNKP-209ENST00000596726 ANKS3Q6ZW76 656 aa22.87■■□□□ 1.25
PNKP-209ENST00000596726 CMASQ8NFW8 434 aaPredicted RBP22.87■■□□□ 1.25
PNKP-209ENST00000596726 FEZF2Q8TBJ5 459 aa22.87■■□□□ 1.25
PNKP-209ENST00000596726 POP1Q99575 1024 aaKnown RBP22.87■■□□□ 1.25
PNKP-209ENST00000596726 PLEKHA4Q9H4M7 779 aa22.87■■□□□ 1.25
PNKP-209ENST00000596726 DENND4AQ7Z401 1863 aa22.86■■□□□ 1.25
PNKP-209ENST00000596726 ANO9A1A5B4 782 aa22.86■■□□□ 1.25
PNKP-209ENST00000596726 GOLGA8IPA6NC78 632 aa22.86■■□□□ 1.25
PNKP-209ENST00000596726 GOLGA8JA6NMD2 632 aa22.86■■□□□ 1.25
PNKP-209ENST00000596726 LOC730098B7Z3J9 87 aa22.86■■□□□ 1.25
PNKP-209ENST00000596726 TBC1D4O60343 1298 aa22.86■■□□□ 1.25
PNKP-209ENST00000596726 MCM4P33991 863 aa22.86■■□□□ 1.25
PNKP-209ENST00000596726 MTHFRP42898 656 aa22.86■■□□□ 1.25
PNKP-209ENST00000596726 SNRPFP62306 86 aaKnown RBP22.86■■□□□ 1.25
PNKP-209ENST00000596726 PSMD2Q13200 908 aa22.86■■□□□ 1.25
PNKP-209ENST00000596726 RAB33AQ14088 237 aa22.86■■□□□ 1.25
PNKP-209ENST00000596726 RSPO2Q6UXX9 243 aaPredicted RBP22.86■■□□□ 1.25
PNKP-209ENST00000596726 TMC5Q6UXY8 1006 aa22.86■■□□□ 1.25
PNKP-209ENST00000596726 GPR149Q86SP6 731 aa22.86■■□□□ 1.25
PNKP-209ENST00000596726 NT5DC4Q86YG4 428 aa22.86■■□□□ 1.25
PNKP-209ENST00000596726 EFCAB13Q8IY85 973 aa22.86■■□□□ 1.25
PNKP-209ENST00000596726 GPD1LQ8N335 351 aa22.86■■□□□ 1.25
PNKP-209ENST00000596726 NECTIN4Q96NY8 510 aa22.86■■□□□ 1.25
PNKP-209ENST00000596726 M0QZQ0 153 aa22.85■■□□□ 1.25
PNKP-209ENST00000596726 PIRO00625 290 aa22.85■■□□□ 1.25
PNKP-209ENST00000596726 PPEF2O14830 753 aa22.85■■□□□ 1.25
PNKP-209ENST00000596726 PRR29P0C7W0 189 aa22.85■■□□□ 1.25
PNKP-209ENST00000596726 SPATA31D3P0C874 917 aa22.85■■□□□ 1.25
PNKP-209ENST00000596726 SSTR3P32745 418 aaPredicted RBP22.85■■□□□ 1.25
PNKP-209ENST00000596726 STK4Q13043 487 aa22.85■■□□□ 1.25
PNKP-209ENST00000596726 VARS2Q5ST30 1063 aaKnown RBP22.85■■□□□ 1.25
PNKP-209ENST00000596726 C9orf57Q5W0N0 161 aa22.85■■□□□ 1.25
PNKP-209ENST00000596726 ELMSAN1Q6PJG2 1045 aa22.85■■□□□ 1.25
PNKP-209ENST00000596726 C15orf39Q6ZRI6 1047 aa22.85■■□□□ 1.25
PNKP-209ENST00000596726 SPATA31D4Q6ZUB0 917 aa22.85■■□□□ 1.25
PNKP-209ENST00000596726 NELFCDQ8IXH7 590 aa22.85■■□□□ 1.25
PNKP-209ENST00000596726 KIAA0895Q8NCT3 520 aa22.85■■□□□ 1.25
PNKP-209ENST00000596726 KREMEN2Q8NCW0 462 aa22.85■■□□□ 1.25
PNKP-209ENST00000596726 RIPOR3Q96MK2 946 aa22.85■■□□□ 1.25
PNKP-209ENST00000596726 RHOBTB2Q9BYZ6 727 aa22.85■■□□□ 1.25
PNKP-209ENST00000596726 POMKQ9H5K3 350 aa22.85■■□□□ 1.25
PNKP-209ENST00000596726 AGPAT3Q9NRZ7 376 aa22.85■■□□□ 1.25
PNKP-209ENST00000596726 EXOC1Q9NV70 894 aa22.85■■□□□ 1.25
PNKP-209ENST00000596726 RBAKQ9NYW8 714 aaPredicted RBP22.85■■□□□ 1.25
PNKP-209ENST00000596726 FBXW11Q9UKB1 542 aa22.85■■□□□ 1.25
PNKP-209ENST00000596726 PCDHB8Q9UN66 801 aa22.85■■□□□ 1.25
PNKP-209ENST00000596726 RPN1P04843 607 aaKnown RBP22.84■■□□□ 1.25
PNKP-209ENST00000596726 WEE2P0C1S8 567 aa22.84■■□□□ 1.25
PNKP-209ENST00000596726 OR1D2P34982 312 aa22.84■■□□□ 1.25
PNKP-209ENST00000596726 DPYDQ12882 1025 aa22.84■■□□□ 1.25
PNKP-209ENST00000596726 ATAT1Q5SQI0 421 aa22.84■■□□□ 1.25
PNKP-209ENST00000596726 FMR1NBQ8N0W7 255 aaPredicted RBP22.84■■□□□ 1.25
PNKP-209ENST00000596726 KHSRPQ92945 711 aaKnown RBP eCLIP22.84■■□□□ 1.25
PNKP-209ENST00000596726 DPP3Q9NY33 737 aa22.84■■□□□ 1.25
PNKP-209ENST00000596726 HSPBP1Q9NZL4 362 aa22.84■■□□□ 1.25
PNKP-209ENST00000596726 CDY1Q9Y6F8 540 aa22.84■■□□□ 1.25
PNKP-209ENST00000596726 PAX3P23760 479 aa22.83■■□□□ 1.25
PNKP-209ENST00000596726 LILRA4P59901 499 aa22.83■■□□□ 1.25
PNKP-209ENST00000596726 KNOP1Q1ED39 458 aaKnown RBP22.83■■□□□ 1.25
PNKP-209ENST00000596726 SLC8B1Q6J4K2 584 aa22.83■■□□□ 1.25
PNKP-209ENST00000596726 CYP26C1Q6V0L0 522 aa22.83■■□□□ 1.25
PNKP-209ENST00000596726 C12orf56Q8IXR9 622 aa22.83■■□□□ 1.25
PNKP-209ENST00000596726 APPL2Q8NEU8 664 aa22.83■■□□□ 1.25
PNKP-209ENST00000596726 ENGASEQ8NFI3 743 aa22.83■■□□□ 1.25
PNKP-209ENST00000596726 KIAA1586Q9HCI6 787 aa22.83■■□□□ 1.25
PNKP-209ENST00000596726 ZDHHC7Q9NXF8 308 aa22.83■■□□□ 1.25
PNKP-209ENST00000596726 CGNQ9P2M7 1197 aaKnown RBP22.83■■□□□ 1.25
PNKP-209ENST00000596726 CCDC195A0A1B0GUA6 201 aa22.82■■□□□ 1.24
PNKP-209ENST00000596726 SPDYE4A6NLX3 237 aa22.82■■□□□ 1.24
PNKP-209ENST00000596726 H7C4K7 107 aa22.82■■□□□ 1.24
PNKP-209ENST00000596726 RFPL2O75678 378 aa22.82■■□□□ 1.24
PNKP-209ENST00000596726 SNW1Q13573 536 aaKnown RBP22.82■■□□□ 1.24
PNKP-209ENST00000596726 CBWD2Q8IUF1 395 aa22.82■■□□□ 1.24
PNKP-209ENST00000596726 DOCK6Q96HP0 2047 aa22.82■■□□□ 1.24
PNKP-209ENST00000596726 GOLGA6L4A6NEF3 574 aa22.81■■□□□ 1.24
PNKP-209ENST00000596726 ZNF233A6NK53 670 aa22.81■■□□□ 1.24
PNKP-209ENST00000596726 CLIC2O15247 247 aa22.81■■□□□ 1.24
PNKP-209ENST00000596726 SPTLC1O15269 473 aa22.81■■□□□ 1.24
PNKP-209ENST00000596726 ZMYND10O75800 440 aa22.81■■□□□ 1.24
PNKP-209ENST00000596726 RHOBTB3O94955 611 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms