RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 RAD51AP2Q09MP3 1159 aa11.54□□□□□ -0.56
CHMP2A-202ENST00000596708 MRPL58Q14197 206 aaKnown RBP11.54□□□□□ -0.56
CHMP2A-202ENST00000596708 SEZ6Q53EL9 994 aa11.54□□□□□ -0.56
CHMP2A-202ENST00000596708 PRSS36Q5K4E3 855 aa11.54□□□□□ -0.56
CHMP2A-202ENST00000596708 TPGS2Q68CL5 300 aa11.54□□□□□ -0.56
CHMP2A-202ENST00000596708 ZNF280DQ6N043 979 aa11.54□□□□□ -0.56
CHMP2A-202ENST00000596708 POTEHQ6S545 545 aa11.54□□□□□ -0.56
CHMP2A-202ENST00000596708 TCEAL8Q8IYN2 117 aa11.54□□□□□ -0.56
CHMP2A-202ENST00000596708 SUMF1Q8NBK3 374 aa11.54□□□□□ -0.56
CHMP2A-202ENST00000596708 APPL2Q8NEU8 664 aa11.54□□□□□ -0.56
CHMP2A-202ENST00000596708 DDX12PQ92771 950 aa11.54□□□□□ -0.56
CHMP2A-202ENST00000596708 TCEAL4Q96EI5 215 aa11.54□□□□□ -0.56
CHMP2A-202ENST00000596708 SUSD3Q96L08 255 aa11.54□□□□□ -0.56
CHMP2A-202ENST00000596708 TBC1D32Q96NH3 1257 aa11.54□□□□□ -0.56
CHMP2A-202ENST00000596708 SH2B1Q9NRF2 756 aaPredicted RBP11.54□□□□□ -0.56
CHMP2A-202ENST00000596708 CNTN3Q9P232 1028 aa11.54□□□□□ -0.56
CHMP2A-202ENST00000596708 ANKFY1Q9P2R3 1169 aa11.54□□□□□ -0.56
CHMP2A-202ENST00000596708 NCDNQ9UBB6 729 aa11.54□□□□□ -0.56
CHMP2A-202ENST00000596708 KCNG1Q9UIX4 513 aa11.54□□□□□ -0.56
CHMP2A-202ENST00000596708 INSL5Q9Y5Q6 135 aa11.54□□□□□ -0.56
CHMP2A-202ENST00000596708 NUP210Q8TEM1 1887 aaPredicted RBP11.53□□□□□ -0.56
CHMP2A-202ENST00000596708 LAD1O00515 517 aa11.53□□□□□ -0.56
CHMP2A-202ENST00000596708 MAN2B1O00754 1011 aa11.53□□□□□ -0.56
CHMP2A-202ENST00000596708 ABLIM1O14639 778 aa11.53□□□□□ -0.56
CHMP2A-202ENST00000596708 SPTLC1O15269 473 aa11.53□□□□□ -0.56
CHMP2A-202ENST00000596708 TBC1D4O60343 1298 aa11.53□□□□□ -0.56
CHMP2A-202ENST00000596708 MYL4P12829 197 aa11.53□□□□□ -0.56
CHMP2A-202ENST00000596708 CPB1P15086 417 aa11.53□□□□□ -0.56
CHMP2A-202ENST00000596708 PROZP22891 400 aa11.53□□□□□ -0.56
CHMP2A-202ENST00000596708 TWF1Q12792 350 aa11.53□□□□□ -0.56
CHMP2A-202ENST00000596708 MAPK7Q13164 816 aa11.53□□□□□ -0.56
CHMP2A-202ENST00000596708 PUM1Q14671 1186 aaKnown RBP eCLIP11.53□□□□□ -0.562e-7■■■□□ 17.1
CHMP2A-202ENST00000596708 NOLC1Q14978 699 aaKnown RBP eCLIP11.53□□□□□ -0.56
CHMP2A-202ENST00000596708 SLC10A6Q3KNW5 377 aa11.53□□□□□ -0.56
CHMP2A-202ENST00000596708 FAM78AQ5JUQ0 283 aa11.53□□□□□ -0.56
CHMP2A-202ENST00000596708 MCTP1Q6DN14 999 aa11.53□□□□□ -0.56
CHMP2A-202ENST00000596708 TSSK4Q6SA08 328 aa11.53□□□□□ -0.56
CHMP2A-202ENST00000596708 KCNK18Q7Z418 384 aa11.53□□□□□ -0.56
CHMP2A-202ENST00000596708 HS6ST3Q8IZP7 471 aa11.53□□□□□ -0.56
CHMP2A-202ENST00000596708 DNASE1L2Q92874 299 aa11.53□□□□□ -0.56
CHMP2A-202ENST00000596708 SECISBP2LQ93073 1101 aaKnown RBP11.53□□□□□ -0.56
CHMP2A-202ENST00000596708 CLDN23Q96B33 292 aa11.53□□□□□ -0.56
CHMP2A-202ENST00000596708 PLIN2Q99541 437 aa11.53□□□□□ -0.56
CHMP2A-202ENST00000596708 TRMT61BQ9BVS5 477 aaKnown RBP11.53□□□□□ -0.56
CHMP2A-202ENST00000596708 TIPINQ9BVW5 301 aa11.53□□□□□ -0.56
CHMP2A-202ENST00000596708 AFF4Q9UHB7 1163 aaKnown RBP11.53□□□□□ -0.56
CHMP2A-202ENST00000596708 NDRG2Q9UN36 371 aaKnown RBP11.53□□□□□ -0.56
CHMP2A-202ENST00000596708 PCDHGA2Q9Y5H1 932 aa11.53□□□□□ -0.56
CHMP2A-202ENST00000596708 SPAG17Q6Q759 2223 aa11.53□□□□□ -0.56
CHMP2A-202ENST00000596708 COL4A2P08572 1712 aa11.52□□□□□ -0.56
CHMP2A-202ENST00000596708 CLDN3O15551 220 aa11.52□□□□□ -0.57
CHMP2A-202ENST00000596708 TOM1L1O75674 476 aa11.52□□□□□ -0.57
CHMP2A-202ENST00000596708 MICAL2O94851 1124 aa11.52□□□□□ -0.57
CHMP2A-202ENST00000596708 PLS3P13797 630 aa11.52□□□□□ -0.57
CHMP2A-202ENST00000596708 GJA1P17302 382 aa11.52□□□□□ -0.57
CHMP2A-202ENST00000596708 PSMC3P17980 439 aa11.52□□□□□ -0.57
CHMP2A-202ENST00000596708 GDI1P31150 447 aa11.52□□□□□ -0.57
CHMP2A-202ENST00000596708 PRPHP41219 470 aa11.52□□□□□ -0.57
CHMP2A-202ENST00000596708 CCR2P41597 374 aa11.52□□□□□ -0.57
CHMP2A-202ENST00000596708 RPS9P46781 194 aaKnown RBP11.52□□□□□ -0.57
CHMP2A-202ENST00000596708 SPAG1Q07617 926 aa11.52□□□□□ -0.57
CHMP2A-202ENST00000596708 IL17AQ16552 155 aa11.52□□□□□ -0.57
CHMP2A-202ENST00000596708 RNF19BQ6ZMZ0 732 aa11.52□□□□□ -0.57
CHMP2A-202ENST00000596708 SPIRE2Q8WWL2 714 aa11.52□□□□□ -0.57
CHMP2A-202ENST00000596708 IRF7Q92985 503 aa11.52□□□□□ -0.57
CHMP2A-202ENST00000596708 BICD1Q96G01 975 aa11.52□□□□□ -0.57
CHMP2A-202ENST00000596708 CDK5RAP3Q96JB5 506 aa11.52□□□□□ -0.57
CHMP2A-202ENST00000596708 ASB16Q96NS5 453 aa11.52□□□□□ -0.57
CHMP2A-202ENST00000596708 NTPCRQ9BSD7 190 aaKnown RBP11.52□□□□□ -0.57
CHMP2A-202ENST00000596708 MMTAG2Q9BU76 263 aaKnown RBP11.52□□□□□ -0.57
CHMP2A-202ENST00000596708 ZNF334Q9HCZ1 680 aaPredicted RBP11.52□□□□□ -0.57
CHMP2A-202ENST00000596708 ASAH2Q9NR71 780 aa11.52□□□□□ -0.57
CHMP2A-202ENST00000596708 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.52□□□□□ -0.57
CHMP2A-202ENST00000596708 ZSCAN32Q9NX65 697 aa11.52□□□□□ -0.57
CHMP2A-202ENST00000596708 TUBGCP4Q9UGJ1 667 aa11.52□□□□□ -0.57
CHMP2A-202ENST00000596708 PCDHB8Q9UN66 801 aa11.52□□□□□ -0.57
CHMP2A-202ENST00000596708 TIMM13Q9Y5L4 95 aaPredicted RBP11.52□□□□□ -0.57
CHMP2A-202ENST00000596708 SDK1Q7Z5N4 2213 aa11.52□□□□□ -0.57
CHMP2A-202ENST00000596708 DCHS1Q96JQ0 3298 aa11.52□□□□□ -0.57
CHMP2A-202ENST00000596708 MED19A0JLT2 244 aaPredicted RBP11.51□□□□□ -0.57
CHMP2A-202ENST00000596708 ZNF263O14978 683 aa11.51□□□□□ -0.57
CHMP2A-202ENST00000596708 MEFVO15553 781 aaPredicted RBP11.51□□□□□ -0.57
CHMP2A-202ENST00000596708 CXCL8P10145 99 aa11.51□□□□□ -0.57
CHMP2A-202ENST00000596708 FCARP24071 287 aa11.51□□□□□ -0.57
CHMP2A-202ENST00000596708 GUCY2CP25092 1073 aa11.51□□□□□ -0.57
CHMP2A-202ENST00000596708 VIPR2P41587 438 aa11.51□□□□□ -0.57
CHMP2A-202ENST00000596708 CACNB1Q02641 598 aaPredicted RBP11.51□□□□□ -0.57
CHMP2A-202ENST00000596708 YWHAHQ04917 246 aaPredicted RBP11.51□□□□□ -0.57
CHMP2A-202ENST00000596708 MTAPQ13126 283 aa11.51□□□□□ -0.57
CHMP2A-202ENST00000596708 FZD5Q13467 585 aa11.51□□□□□ -0.57
CHMP2A-202ENST00000596708 RSPO4Q2I0M5 234 aaPredicted RBP11.51□□□□□ -0.57
CHMP2A-202ENST00000596708 VITQ6UXI7 678 aa11.51□□□□□ -0.57
CHMP2A-202ENST00000596708 ZPBP2Q6X784 338 aa11.51□□□□□ -0.57
CHMP2A-202ENST00000596708 DSTYKQ6XUX3 929 aa11.51□□□□□ -0.57
CHMP2A-202ENST00000596708 USP37Q86T82 979 aa11.51□□□□□ -0.57
CHMP2A-202ENST00000596708 SYT2Q8N9I0 419 aaPredicted RBP11.51□□□□□ -0.57
CHMP2A-202ENST00000596708 LEMD2Q8NC56 503 aa11.51□□□□□ -0.57
CHMP2A-202ENST00000596708 ZBTB44Q8NCP5 570 aa11.51□□□□□ -0.57
CHMP2A-202ENST00000596708 TMEM161BQ8NDZ6 487 aa11.51□□□□□ -0.57
CHMP2A-202ENST00000596708 FAM3CQ92520 227 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms