RNA–Protein interactions for RNA: ENST00000596676.2

SMCO4-206, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 BASIC

Gene SMCO4, Length 180 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-206ENST00000596676 SPG21Q9NZD8 308 aa16.75■□□□□ 0.27
SMCO4-206ENST00000596676 PCDHB12Q9Y5F1 795 aa16.75■□□□□ 0.27
SMCO4-206ENST00000596676 PCDHGC5Q9Y5F6 944 aa16.75■□□□□ 0.27
SMCO4-206ENST00000596676 MYO9BQ13459 2157 aa16.75■□□□□ 0.27
SMCO4-206ENST00000596676 KCNJ18B7U540 433 aa16.74■□□□□ 0.27
SMCO4-206ENST00000596676 PIRO00625 290 aa16.74■□□□□ 0.27
SMCO4-206ENST00000596676 B3GAT3O94766 335 aa16.74■□□□□ 0.27
SMCO4-206ENST00000596676 FGFR1OPO95684 399 aaKnown RBP16.74■□□□□ 0.27
SMCO4-206ENST00000596676 ATP1A3P13637 1013 aa16.74■□□□□ 0.27
SMCO4-206ENST00000596676 MTIF2P46199 727 aaKnown RBP16.74■□□□□ 0.27
SMCO4-206ENST00000596676 MARSP56192 900 aaKnown RBP16.74■□□□□ 0.27
SMCO4-206ENST00000596676 KCNJ12Q14500 433 aa16.74■□□□□ 0.27
SMCO4-206ENST00000596676 DCLRE1AQ6PJP8 1040 aa16.74■□□□□ 0.27
SMCO4-206ENST00000596676 C15orf39Q6ZRI6 1047 aa16.74■□□□□ 0.27
SMCO4-206ENST00000596676 Q7L0L9 218 aa16.74■□□□□ 0.27
SMCO4-206ENST00000596676 GAS2L3Q86XJ1 694 aa16.74■□□□□ 0.27
SMCO4-206ENST00000596676 NT5DC4Q86YG4 428 aa16.74■□□□□ 0.27
SMCO4-206ENST00000596676 FBXO22Q8NEZ5 403 aa16.74■□□□□ 0.27
SMCO4-206ENST00000596676 SPPL3Q8TCT6 385 aa16.74■□□□□ 0.27
SMCO4-206ENST00000596676 RSPH1Q8WYR4 309 aa16.74■□□□□ 0.27
SMCO4-206ENST00000596676 SEMA4DQ92854 862 aa16.74■□□□□ 0.27
SMCO4-206ENST00000596676 TSPAN18Q96SJ8 248 aa16.74■□□□□ 0.27
SMCO4-206ENST00000596676 COLEC11Q9BWP8 271 aa16.74■□□□□ 0.27
SMCO4-206ENST00000596676 C5orf67F2Z3F1 127 aa16.73■□□□□ 0.27
SMCO4-206ENST00000596676 XPOTO43592 962 aaKnown RBP16.73■□□□□ 0.27
SMCO4-206ENST00000596676 TADA2AO75478 443 aa16.73■□□□□ 0.27
SMCO4-206ENST00000596676 GNA14O95837 355 aa16.73■□□□□ 0.27
SMCO4-206ENST00000596676 RPL9P32969 192 aaKnown RBP16.73■□□□□ 0.27
SMCO4-206ENST00000596676 MYL6P60660 151 aa16.73■□□□□ 0.27
SMCO4-206ENST00000596676 BIRC3Q13489 604 aa16.73■□□□□ 0.27
SMCO4-206ENST00000596676 GPM6BQ13491 265 aa16.73■□□□□ 0.27
SMCO4-206ENST00000596676 GRIN2CQ14957 1233 aa16.73■□□□□ 0.27
SMCO4-206ENST00000596676 ZACNQ401N2 412 aa16.73■□□□□ 0.27
SMCO4-206ENST00000596676 TIGD5Q53EQ6 642 aa16.73■□□□□ 0.27
SMCO4-206ENST00000596676 RNF214Q8ND24 703 aa16.73■□□□□ 0.27
SMCO4-206ENST00000596676 TAS1R2Q8TE23 839 aa16.73■□□□□ 0.27
SMCO4-206ENST00000596676 DDX27Q96GQ7 796 aaKnown RBP16.73■□□□□ 0.27
SMCO4-206ENST00000596676 UROC1Q96N76 676 aa16.73■□□□□ 0.27
SMCO4-206ENST00000596676 PI4K2AQ9BTU6 479 aa16.73■□□□□ 0.27
SMCO4-206ENST00000596676 NAT10Q9H0A0 1025 aaKnown RBP16.73■□□□□ 0.27
SMCO4-206ENST00000596676 PRDM12Q9H4Q4 367 aa16.73■□□□□ 0.27
SMCO4-206ENST00000596676 METTL14Q9HCE5 456 aaKnown RBP16.73■□□□□ 0.27
SMCO4-206ENST00000596676 AAASQ9NRG9 546 aa16.73■□□□□ 0.27
SMCO4-206ENST00000596676 TAB2Q9NYJ8 693 aa16.73■□□□□ 0.27
SMCO4-206ENST00000596676 ADAM28Q9UKQ2 775 aa16.73■□□□□ 0.27
SMCO4-206ENST00000596676 IKBKBO14920 756 aa16.72■□□□□ 0.27
SMCO4-206ENST00000596676 PHACTR2O75167 634 aa16.72■□□□□ 0.27
SMCO4-206ENST00000596676 EFEMP2O95967 443 aa16.72■□□□□ 0.27
SMCO4-206ENST00000596676 HLA-DRAP01903 254 aa16.72■□□□□ 0.27
SMCO4-206ENST00000596676 ZNF18P17022 549 aa16.72■□□□□ 0.27
SMCO4-206ENST00000596676 ERVFC1P60507 584 aa16.72■□□□□ 0.27
SMCO4-206ENST00000596676 KCNH2Q12809 1159 aa16.72■□□□□ 0.27
SMCO4-206ENST00000596676 CAMK1Q14012 370 aa16.72■□□□□ 0.27
SMCO4-206ENST00000596676 KRT31Q15323 416 aa16.72■□□□□ 0.27
SMCO4-206ENST00000596676 TCP11X2Q5H9J9 407 aa16.72■□□□□ 0.27
SMCO4-206ENST00000596676 SPOPLQ6IQ16 392 aa16.72■□□□□ 0.27
SMCO4-206ENST00000596676 FUT10Q6P4F1 479 aa16.72■□□□□ 0.27
SMCO4-206ENST00000596676 POF1BQ8WVV4 589 aa16.72■□□□□ 0.27
SMCO4-206ENST00000596676 AUTS2Q8WXX7 1259 aa16.72■□□□□ 0.27
SMCO4-206ENST00000596676 ITGA11Q9UKX5 1188 aa16.72■□□□□ 0.27
SMCO4-206ENST00000596676 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.72■□□□□ 0.27
SMCO4-206ENST00000596676 TIMM13Q9Y5L4 95 aaPredicted RBP16.72■□□□□ 0.27
SMCO4-206ENST00000596676 H3BNC9 293 aa16.71■□□□□ 0.27
SMCO4-206ENST00000596676 LPXNO60711 386 aa16.71■□□□□ 0.27
SMCO4-206ENST00000596676 IRS1P35568 1242 aa16.71■□□□□ 0.27
SMCO4-206ENST00000596676 FMO5P49326 533 aa16.71■□□□□ 0.27
SMCO4-206ENST00000596676 LILRA4P59901 499 aa16.71■□□□□ 0.27
SMCO4-206ENST00000596676 RBP5P82980 135 aa16.71■□□□□ 0.27
SMCO4-206ENST00000596676 NCOA4Q13772 614 aa16.71■□□□□ 0.27
SMCO4-206ENST00000596676 MIIPQ5JXC2 388 aa16.71■□□□□ 0.27
SMCO4-206ENST00000596676 TMEM169Q96HH4 297 aa16.71■□□□□ 0.27
SMCO4-206ENST00000596676 TUBGCP2Q9BSJ2 902 aa16.71■□□□□ 0.27
SMCO4-206ENST00000596676 XYLT2Q9H1B5 865 aa16.71■□□□□ 0.27
SMCO4-206ENST00000596676 VPS16Q9H269 839 aa16.71■□□□□ 0.27
SMCO4-206ENST00000596676 TMEM8AQ9HCN3 771 aa16.71■□□□□ 0.27
SMCO4-206ENST00000596676 MAGEC2Q9UBF1 373 aaPredicted RBP16.71■□□□□ 0.27
SMCO4-206ENST00000596676 POLIQ9UNA4 740 aa16.71■□□□□ 0.27
SMCO4-206ENST00000596676 NUB1Q9Y5A7 615 aa16.71■□□□□ 0.27
SMCO4-206ENST00000596676 MYO7AQ13402 2215 aa16.71■□□□□ 0.27
SMCO4-206ENST00000596676 VWA8A3KMH1 1905 aa16.7■□□□□ 0.26
SMCO4-206ENST00000596676 COL4A4P53420 1690 aaPredicted RBP16.7■□□□□ 0.26
SMCO4-206ENST00000596676 SMTNL1A8MU46 457 aa16.7■□□□□ 0.26
SMCO4-206ENST00000596676 BECN2A8MW95 431 aa16.7■□□□□ 0.26
SMCO4-206ENST00000596676 TMEM189-UBE2V1I3L0A0 370 aa16.7■□□□□ 0.26
SMCO4-206ENST00000596676 AFPP02771 609 aaKnown RBP16.7■□□□□ 0.26
SMCO4-206ENST00000596676 RB1P06400 928 aa16.7■□□□□ 0.26
SMCO4-206ENST00000596676 TKTP29401 623 aaKnown RBP16.7■□□□□ 0.26
SMCO4-206ENST00000596676 MXI1P50539 228 aa16.7■□□□□ 0.26
SMCO4-206ENST00000596676 FXR1P51114 621 aaKnown RBP eCLIP16.7■□□□□ 0.26
SMCO4-206ENST00000596676 PLCB3Q01970 1234 aa16.7■□□□□ 0.26
SMCO4-206ENST00000596676 ENPEPQ07075 957 aa16.7■□□□□ 0.26
SMCO4-206ENST00000596676 FAM171A1Q5VUB5 890 aa16.7■□□□□ 0.26
SMCO4-206ENST00000596676 APTXQ7Z2E3 356 aaKnown RBP16.7■□□□□ 0.26
SMCO4-206ENST00000596676 CEP57Q86XR8 500 aa16.7■□□□□ 0.26
SMCO4-206ENST00000596676 FAM114A1Q8IWE2 563 aa16.7■□□□□ 0.26
SMCO4-206ENST00000596676 VPS52Q8N1B4 723 aa16.7■□□□□ 0.26
SMCO4-206ENST00000596676 FAM200AQ8TCP9 573 aa16.7■□□□□ 0.26
SMCO4-206ENST00000596676 HPDLQ96IR7 371 aa16.7■□□□□ 0.26
SMCO4-206ENST00000596676 SENP8Q96LD8 212 aa16.7■□□□□ 0.26
SMCO4-206ENST00000596676 SAMD11Q96NU1 681 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms