RNA–Protein interactions for RNA: ENST00000595858.5

DDX49-204, Transcript of DEAD-box helicase 49, humanhuman

TSL 1 (best)

Gene DDX49, Length 1,882 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-204ENST00000595858 ITGA11Q9UKX5 1188 aa16.15■□□□□ 0.18
DDX49-204ENST00000595858 PPEF2O14830 753 aa16.14■□□□□ 0.17
DDX49-204ENST00000595858 TADA2AO75478 443 aa16.14■□□□□ 0.17
DDX49-204ENST00000595858 ITGB3P05106 788 aa16.14■□□□□ 0.17
DDX49-204ENST00000595858 KRT17Q04695 432 aa16.14■□□□□ 0.17
DDX49-204ENST00000595858 PPP3CAQ08209 521 aa16.14■□□□□ 0.17
DDX49-204ENST00000595858 NCAPHQ15003 741 aa16.14■□□□□ 0.17
DDX49-204ENST00000595858 ZNF697Q5TEC3 545 aa16.14■□□□□ 0.17
DDX49-204ENST00000595858 TCERG1LQ5VWI1 586 aa16.14■□□□□ 0.17
DDX49-204ENST00000595858 SV2AQ7L0J3 742 aa16.14■□□□□ 0.17
DDX49-204ENST00000595858 CREBRFQ8IUR6 639 aa16.14■□□□□ 0.17
DDX49-204ENST00000595858 TRIM59Q8IWR1 403 aa16.14■□□□□ 0.17
DDX49-204ENST00000595858 SLC35C1Q96A29 364 aa16.14■□□□□ 0.17
DDX49-204ENST00000595858 CNOT6LQ96LI5 555 aaKnown RBP16.14■□□□□ 0.17
DDX49-204ENST00000595858 ALG13Q9NP73 1137 aaKnown RBP16.14■□□□□ 0.17
DDX49-204ENST00000595858 AGAP1Q9UPQ3 857 aa16.14■□□□□ 0.17
DDX49-204ENST00000595858 NLRC5Q86WI3 1866 aa16.14■□□□□ 0.17
DDX49-204ENST00000595858 KRT19P08727 400 aa16.14■□□□□ 0.17
DDX49-204ENST00000595858 POLR2BP30876 1174 aaKnown RBP16.14■□□□□ 0.17
DDX49-204ENST00000595858 GTF2H1P32780 548 aa16.14■□□□□ 0.17
DDX49-204ENST00000595858 GCLMP48507 274 aa16.14■□□□□ 0.17
DDX49-204ENST00000595858 RBP5P82980 135 aa16.14■□□□□ 0.17
DDX49-204ENST00000595858 GPM6BQ13491 265 aa16.14■□□□□ 0.17
DDX49-204ENST00000595858 HSP90AA4PQ58FG1 418 aa16.14■□□□□ 0.17
DDX49-204ENST00000595858 DCAF17Q5H9S7 520 aaPredicted RBP16.14■□□□□ 0.17
DDX49-204ENST00000595858 LRSAM1Q6UWE0 723 aa16.14■□□□□ 0.17
DDX49-204ENST00000595858 FAM114A1Q8IWE2 563 aa16.14■□□□□ 0.17
DDX49-204ENST00000595858 AOPEPQ8N6M6 819 aa16.14■□□□□ 0.17
DDX49-204ENST00000595858 SPPL3Q8TCT6 385 aa16.14■□□□□ 0.17
DDX49-204ENST00000595858 PPP1R9BQ96SB3 815 aa16.14■□□□□ 0.17
DDX49-204ENST00000595858 FANCLQ9NW38 375 aa16.14■□□□□ 0.17
DDX49-204ENST00000595858 CHD9Q3L8U1 2897 aa16.13■□□□□ 0.17
DDX49-204ENST00000595858 CHD7Q9P2D1 2997 aa16.13■□□□□ 0.17
DDX49-204ENST00000595858 RFXAPO00287 272 aa16.13■□□□□ 0.17
DDX49-204ENST00000595858 GRM6O15303 877 aa16.13■□□□□ 0.17
DDX49-204ENST00000595858 CAVIN2O95810 425 aa16.13■□□□□ 0.17
DDX49-204ENST00000595858 CST3P01034 146 aaPredicted RBP16.13■□□□□ 0.17
DDX49-204ENST00000595858 FXR1P51114 621 aaKnown RBP eCLIP16.13■□□□□ 0.17
DDX49-204ENST00000595858 GRIN2CQ14957 1233 aa16.13■□□□□ 0.17
DDX49-204ENST00000595858 ZACNQ401N2 412 aa16.13■□□□□ 0.17
DDX49-204ENST00000595858 TDRD10Q5VZ19 366 aaKnown RBP16.13■□□□□ 0.17
DDX49-204ENST00000595858 C15orf39Q6ZRI6 1047 aa16.13■□□□□ 0.17
DDX49-204ENST00000595858 DDX53Q86TM3 631 aaKnown RBP16.13■□□□□ 0.17
DDX49-204ENST00000595858 DHX40Q8IX18 779 aaKnown RBP16.13■□□□□ 0.17
DDX49-204ENST00000595858 GPR62Q9BZJ7 368 aa16.13■□□□□ 0.17
DDX49-204ENST00000595858 MMRN2Q9H8L6 949 aa16.13■□□□□ 0.17
DDX49-204ENST00000595858 PUF60Q9UHX1 559 aaKnown RBP16.13■□□□□ 0.17
DDX49-204ENST00000595858 LZTS1Q9Y250 596 aa16.13■□□□□ 0.17
DDX49-204ENST00000595858 NUB1Q9Y5A7 615 aa16.13■□□□□ 0.17
DDX49-204ENST00000595858 SMTNL1A8MU46 457 aa16.12■□□□□ 0.17
DDX49-204ENST00000595858 ESPNB1AK53 854 aa16.12■□□□□ 0.17
DDX49-204ENST00000595858 STX10O60499 249 aa16.12■□□□□ 0.17
DDX49-204ENST00000595858 PHACTR2O75167 634 aa16.12■□□□□ 0.17
DDX49-204ENST00000595858 EFEMP2O95967 443 aa16.12■□□□□ 0.17
DDX49-204ENST00000595858 LILRA4P59901 499 aa16.12■□□□□ 0.17
DDX49-204ENST00000595858 BIRC3Q13489 604 aa16.12■□□□□ 0.17
DDX49-204ENST00000595858 IQCB1Q15051 598 aa16.12■□□□□ 0.17
DDX49-204ENST00000595858 FUT10Q6P4F1 479 aa16.12■□□□□ 0.17
DDX49-204ENST00000595858 GDPD5Q8WTR4 605 aa16.12■□□□□ 0.17
DDX49-204ENST00000595858 FAM161BQ96MY7 647 aa16.12■□□□□ 0.17
DDX49-204ENST00000595858 VN1R3Q9BXE9 311 aa16.12■□□□□ 0.17
DDX49-204ENST00000595858 PRDM12Q9H4Q4 367 aa16.12■□□□□ 0.17
DDX49-204ENST00000595858 CBX8Q9HC52 389 aa16.12■□□□□ 0.17
DDX49-204ENST00000595858 TMEM8AQ9HCN3 771 aa16.12■□□□□ 0.17
DDX49-204ENST00000595858 MAGEC2Q9UBF1 373 aaPredicted RBP16.12■□□□□ 0.17
DDX49-204ENST00000595858 R3HCC1Q9Y3T6 440 aaKnown RBP16.12■□□□□ 0.17
DDX49-204ENST00000595858 SF3B1O75533 1304 aaKnown RBP eCLIP16.12■□□□□ 0.17
DDX49-204ENST00000595858 DNAJB1P25685 340 aa16.12■□□□□ 0.17
DDX49-204ENST00000595858 BRCC3P46736 316 aa16.12■□□□□ 0.17
DDX49-204ENST00000595858 UBE3AQ05086 875 aa16.12■□□□□ 0.17
DDX49-204ENST00000595858 TIGD5Q53EQ6 642 aa16.12■□□□□ 0.17
DDX49-204ENST00000595858 CDKAL1Q5VV42 579 aa16.12■□□□□ 0.17
DDX49-204ENST00000595858 KRT39Q6A163 491 aa16.12■□□□□ 0.17
DDX49-204ENST00000595858 RNF168Q8IYW5 571 aaPredicted RBP16.12■□□□□ 0.17
DDX49-204ENST00000595858 LRRC52Q8N7C0 313 aa16.12■□□□□ 0.17
DDX49-204ENST00000595858 POF1BQ8WVV4 589 aa16.12■□□□□ 0.17
DDX49-204ENST00000595858 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.12■□□□□ 0.17
DDX49-204ENST00000595858 KCNJ18B7U540 433 aa16.11■□□□□ 0.17
DDX49-204ENST00000595858 SPTLC1O15269 473 aa16.11■□□□□ 0.17
DDX49-204ENST00000595858 TRAPPC3O43617 180 aa16.11■□□□□ 0.17
DDX49-204ENST00000595858 LPXNO60711 386 aa16.11■□□□□ 0.17
DDX49-204ENST00000595858 VNN1O95497 513 aa16.11■□□□□ 0.17
DDX49-204ENST00000595858 PNPLA4P41247 253 aa16.11■□□□□ 0.17
DDX49-204ENST00000595858 MTIF2P46199 727 aaKnown RBP16.11■□□□□ 0.17
DDX49-204ENST00000595858 AARSP49588 968 aaKnown RBP eCLIP16.11■□□□□ 0.17
DDX49-204ENST00000595858 TAF6P49848 677 aa16.11■□□□□ 0.17
DDX49-204ENST00000595858 KCNH2Q12809 1159 aa16.11■□□□□ 0.17
DDX49-204ENST00000595858 ELAVL2Q12926 359 aaKnown RBP16.11■□□□□ 0.17
DDX49-204ENST00000595858 TRPC3Q13507 836 aa16.11■□□□□ 0.17
DDX49-204ENST00000595858 KCNJ12Q14500 433 aa16.11■□□□□ 0.17
DDX49-204ENST00000595858 TCP11X2Q5H9J9 407 aa16.11■□□□□ 0.17
DDX49-204ENST00000595858 TAS1R1Q7RTX1 841 aa16.11■□□□□ 0.17
DDX49-204ENST00000595858 VPS52Q8N1B4 723 aa16.11■□□□□ 0.17
DDX49-204ENST00000595858 ZNF560Q96MR9 790 aa16.11■□□□□ 0.17
DDX49-204ENST00000595858 HSD3B7Q9H2F3 369 aa16.11■□□□□ 0.17
DDX49-204ENST00000595858 TSPY26PQ9H489 355 aa16.11■□□□□ 0.17
DDX49-204ENST00000595858 STK39Q9UEW8 545 aa16.11■□□□□ 0.17
DDX49-204ENST00000595858 SCN1AP35498 2009 aa16.11■□□□□ 0.17
DDX49-204ENST00000595858 CDH23Q9H251 3354 aa16.11■□□□□ 0.17
DDX49-204ENST00000595858 BECN2A8MW95 431 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms