RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 SUSD3Q96L08 255 aa11.93□□□□□ -0.5
SHKBP1-206ENST00000595523 TSPAN18Q96SJ8 248 aa11.93□□□□□ -0.5
SHKBP1-206ENST00000595523 PCIF1Q9H4Z3 704 aa11.93□□□□□ -0.5
SHKBP1-206ENST00000595523 ASB7Q9H672 318 aa11.93□□□□□ -0.5
SHKBP1-206ENST00000595523 SLC39A2Q9NP94 309 aa11.93□□□□□ -0.5
SHKBP1-206ENST00000595523 MTRRQ9UBK8 725 aa11.93□□□□□ -0.5
SHKBP1-206ENST00000595523 DERAQ9Y315 318 aa11.93□□□□□ -0.5
SHKBP1-206ENST00000595523 TECTAO75443 2155 aa11.93□□□□□ -0.5
SHKBP1-206ENST00000595523 UBE4BO95155 1302 aa11.92□□□□□ -0.5
SHKBP1-206ENST00000595523 ANO9A1A5B4 782 aa11.92□□□□□ -0.5
SHKBP1-206ENST00000595523 LOC730098B7Z3J9 87 aa11.92□□□□□ -0.5
SHKBP1-206ENST00000595523 TRAPPC3O43617 180 aa11.92□□□□□ -0.5
SHKBP1-206ENST00000595523 EXTL3O43909 919 aa11.92□□□□□ -0.5
SHKBP1-206ENST00000595523 TBC1D4O60343 1298 aa11.92□□□□□ -0.5
SHKBP1-206ENST00000595523 RFPL2O75678 378 aa11.92□□□□□ -0.5
SHKBP1-206ENST00000595523 PAPLNO95428 1278 aa11.92□□□□□ -0.5
SHKBP1-206ENST00000595523 C1RP00736 705 aa11.92□□□□□ -0.5
SHKBP1-206ENST00000595523 MCM4P33991 863 aa11.92□□□□□ -0.5
SHKBP1-206ENST00000595523 POU5F1Q01860 360 aaKnown RBP11.92□□□□□ -0.5
SHKBP1-206ENST00000595523 CREMQ03060 361 aa11.92□□□□□ -0.5
SHKBP1-206ENST00000595523 ITIH3Q06033 890 aa11.92□□□□□ -0.5
SHKBP1-206ENST00000595523 STK4Q13043 487 aa11.92□□□□□ -0.5
SHKBP1-206ENST00000595523 MRPL58Q14197 206 aaKnown RBP11.92□□□□□ -0.5
SHKBP1-206ENST00000595523 TMEM132DQ14C87 1099 aa11.92□□□□□ -0.5
SHKBP1-206ENST00000595523 KMT5BQ4FZB7 885 aa11.92□□□□□ -0.5
SHKBP1-206ENST00000595523 VARS2Q5ST30 1063 aaKnown RBP11.92□□□□□ -0.5
SHKBP1-206ENST00000595523 C9orf57Q5W0N0 161 aa11.92□□□□□ -0.5
SHKBP1-206ENST00000595523 SCARA3Q6AZY7 606 aa11.92□□□□□ -0.5
SHKBP1-206ENST00000595523 TMC5Q6UXY8 1006 aa11.92□□□□□ -0.5
SHKBP1-206ENST00000595523 KRBA2Q6ZNG9 492 aa11.92□□□□□ -0.5
SHKBP1-206ENST00000595523 STXBP4Q6ZWJ1 553 aa11.92□□□□□ -0.5
SHKBP1-206ENST00000595523 NELFCDQ8IXH7 590 aa11.92□□□□□ -0.5
SHKBP1-206ENST00000595523 PHF7Q9BWX1 381 aaPredicted RBP11.92□□□□□ -0.5
SHKBP1-206ENST00000595523 POMKQ9H5K3 350 aa11.92□□□□□ -0.5
SHKBP1-206ENST00000595523 SFXN1Q9H9B4 322 aa11.92□□□□□ -0.5
SHKBP1-206ENST00000595523 AGPAT3Q9NRZ7 376 aa11.92□□□□□ -0.5
SHKBP1-206ENST00000595523 FBXW11Q9UKB1 542 aa11.92□□□□□ -0.5
SHKBP1-206ENST00000595523 C2CD2Q9Y426 696 aa11.92□□□□□ -0.5
SHKBP1-206ENST00000595523 NUB1Q9Y5A7 615 aa11.92□□□□□ -0.5
SHKBP1-206ENST00000595523 PTPRJQ12913 1337 aa11.91□□□□□ -0.5
SHKBP1-206ENST00000595523 M0QZQ0 153 aa11.91□□□□□ -0.5
SHKBP1-206ENST00000595523 PIRO00625 290 aa11.91□□□□□ -0.5
SHKBP1-206ENST00000595523 SYN3O14994 580 aa11.91□□□□□ -0.5
SHKBP1-206ENST00000595523 SPTLC1O15269 473 aa11.91□□□□□ -0.5
SHKBP1-206ENST00000595523 ZNF202O95125 648 aa11.91□□□□□ -0.5
SHKBP1-206ENST00000595523 IL18RAPO95256 599 aa11.91□□□□□ -0.5
SHKBP1-206ENST00000595523 MYL1P05976 194 aa11.91□□□□□ -0.5
SHKBP1-206ENST00000595523 SSTR3P32745 418 aaPredicted RBP11.91□□□□□ -0.5
SHKBP1-206ENST00000595523 OR1D2P34982 312 aa11.91□□□□□ -0.5
SHKBP1-206ENST00000595523 DPYDQ12882 1025 aa11.91□□□□□ -0.5
SHKBP1-206ENST00000595523 SNW1Q13573 536 aaKnown RBP11.91□□□□□ -0.5
SHKBP1-206ENST00000595523 RAB33AQ14088 237 aa11.91□□□□□ -0.5
SHKBP1-206ENST00000595523 ARMCX5Q6P1M9 558 aa11.91□□□□□ -0.5
SHKBP1-206ENST00000595523 PDXDC1Q6P996 788 aa11.91□□□□□ -0.5
SHKBP1-206ENST00000595523 ANKS3Q6ZW76 656 aa11.91□□□□□ -0.5
SHKBP1-206ENST00000595523 GPR149Q86SP6 731 aa11.91□□□□□ -0.5
SHKBP1-206ENST00000595523 CBWD2Q8IUF1 395 aa11.91□□□□□ -0.5
SHKBP1-206ENST00000595523 FMR1NBQ8N0W7 255 aaPredicted RBP11.91□□□□□ -0.5
SHKBP1-206ENST00000595523 GPD1LQ8N335 351 aa11.91□□□□□ -0.5
SHKBP1-206ENST00000595523 ENGASEQ8NFI3 743 aa11.91□□□□□ -0.5
SHKBP1-206ENST00000595523 BEST2Q8NFU1 509 aa11.91□□□□□ -0.5
SHKBP1-206ENST00000595523 CMASQ8NFW8 434 aaPredicted RBP11.91□□□□□ -0.5
SHKBP1-206ENST00000595523 CXorf38Q8TB03 319 aa11.91□□□□□ -0.5
SHKBP1-206ENST00000595523 HDAC7Q8WUI4 952 aa11.91□□□□□ -0.5
SHKBP1-206ENST00000595523 ZNF707Q96C28 371 aaPredicted RBP11.91□□□□□ -0.5
SHKBP1-206ENST00000595523 RBAKQ9NYW8 714 aaPredicted RBP11.91□□□□□ -0.5
SHKBP1-206ENST00000595523 HSPBP1Q9NZL4 362 aa11.91□□□□□ -0.5
SHKBP1-206ENST00000595523 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.91□□□□□ -0.5
SHKBP1-206ENST00000595523 BACE2Q9Y5Z0 518 aa11.91□□□□□ -0.5
SHKBP1-206ENST00000595523 CDY1Q9Y6F8 540 aa11.91□□□□□ -0.5
SHKBP1-206ENST00000595523 XPOTO43592 962 aaKnown RBP11.9□□□□□ -0.5
SHKBP1-206ENST00000595523 LDHAP00338 332 aaKnown RBP11.9□□□□□ -0.5
SHKBP1-206ENST00000595523 RPN1P04843 607 aaKnown RBP11.9□□□□□ -0.5
SHKBP1-206ENST00000595523 LILRA4P59901 499 aa11.9□□□□□ -0.5
SHKBP1-206ENST00000595523 SLC8B1Q6J4K2 584 aa11.9□□□□□ -0.5
SHKBP1-206ENST00000595523 CES5AQ6NT32 575 aa11.9□□□□□ -0.5
SHKBP1-206ENST00000595523 C15orf39Q6ZRI6 1047 aa11.9□□□□□ -0.5
SHKBP1-206ENST00000595523 KREMEN2Q8NCW0 462 aa11.9□□□□□ -0.5
SHKBP1-206ENST00000595523 RPGRIP1Q96KN7 1286 aa11.9□□□□□ -0.5
SHKBP1-206ENST00000595523 POP1Q99575 1024 aaKnown RBP11.9□□□□□ -0.5
SHKBP1-206ENST00000595523 PLEKHA4Q9H4M7 779 aa11.9□□□□□ -0.5
SHKBP1-206ENST00000595523 PDE11AQ9HCR9 933 aa11.9□□□□□ -0.5
SHKBP1-206ENST00000595523 EXOC1Q9NV70 894 aa11.9□□□□□ -0.5
SHKBP1-206ENST00000595523 DPP3Q9NY33 737 aa11.9□□□□□ -0.5
SHKBP1-206ENST00000595523 FBXL5Q9UKA1 691 aa11.9□□□□□ -0.5
SHKBP1-206ENST00000595523 CIZ1Q9ULV3 898 aaPredicted RBP11.9□□□□□ -0.5
SHKBP1-206ENST00000595523 PCDHB8Q9UN66 801 aa11.9□□□□□ -0.5
SHKBP1-206ENST00000595523 TIMM13Q9Y5L4 95 aaPredicted RBP11.9□□□□□ -0.5
SHKBP1-206ENST00000595523 PTPRDP23468 1912 aa11.9□□□□□ -0.51
SHKBP1-206ENST00000595523 DENND4CQ5VZ89 1909 aa11.9□□□□□ -0.51
SHKBP1-206ENST00000595523 ZDBF2Q9HCK1 2354 aa11.89□□□□□ -0.51
SHKBP1-206ENST00000595523 CCDC195A0A1B0GUA6 201 aa11.89□□□□□ -0.51
SHKBP1-206ENST00000595523 WDR27A2RRH5 827 aa11.89□□□□□ -0.51
SHKBP1-206ENST00000595523 KIAA0391O15091 583 aaKnown RBP11.89□□□□□ -0.51
SHKBP1-206ENST00000595523 CLIC2O15247 247 aa11.89□□□□□ -0.51
SHKBP1-206ENST00000595523 ZMYND10O75800 440 aa11.89□□□□□ -0.51
SHKBP1-206ENST00000595523 RHOBTB3O94955 611 aa11.89□□□□□ -0.51
SHKBP1-206ENST00000595523 SP100P23497 879 aaPredicted RBP11.89□□□□□ -0.51
SHKBP1-206ENST00000595523 MTHFRP42898 656 aa11.89□□□□□ -0.51
SHKBP1-206ENST00000595523 ROR1Q01973 937 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms